Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-179
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 1-185
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 1-190
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-194
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-198
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1-214
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 29

Conread position: 1-216
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-217
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 80

Conread position: 1-268
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 289

Conread position: 1-275
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 290

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 175

Conread position: 1-275
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 157

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 290

Conread position: 1-275
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 288

Conread position: 1-277
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-286
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 226

Conread position: 1-286
Cow position:
Alignm length: 306
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 289

Conread position: 1-300
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 1-343
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 44

Conread position: 1-357
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 13

Conread position: 1-372
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 1-437
Cow position:
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 1-437
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 79

Conread position: 1-448
Cow position:
Alignm length: 467
Alignm identity: 318
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 115

Conread position: 1-449
Cow position:
Alignm length: 476
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 277

Conread position: 1-464
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 273

Conread position: 1-464
Cow position:
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 1-489
Cow position:
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 1-491
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 177

Conread position: 1-502
Cow position:
Alignm length: 526
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-504
Cow position:
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-538
Cow position:
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 268

Conread position: 1-539
Cow position:
Alignm length: 567
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 1-539
Cow position:
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 244

Conread position: 1-539
Cow position:
Alignm length: 566
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 1-539
Cow position:
Alignm length: 570
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 288

Conread position: 1-555
Cow position:
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 210

Conread position: 1-556
Cow position:
Alignm length: 571
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 1-558
Cow position:
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-559
Cow position:
Alignm length: 587
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 245

Conread position: 1-559
Cow position:
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-559
Cow position:
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-560
Cow position:
Alignm length: 588
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 1-560
Cow position:
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-593
Cow position:
Alignm length: 630
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 386

Conread position: 1-593
Cow position:
Alignm length: 642
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 396

Conread position: 1-593
Cow position:
Alignm length: 637
Alignm identity: 412
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 178

Conread position: 1-593
Cow position:
Alignm length: 644
Alignm identity: 418
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 550

Conread position: 1-595
Cow position:
Alignm length: 638
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 2-504
Cow position:
Alignm length: 530
Alignm identity: 352
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 17

Conread position: 2-529
Cow position:
Alignm length: 577
Alignm identity: 382
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 550

Conread position: 2-539
Cow position:
Alignm length: 566
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 137

Conread position: 2-539
Cow position:
Alignm length: 562
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 2-539
Cow position:
Alignm length: 576
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 2-541
Cow position:
Alignm length: 565
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 2-573
Cow position:
Alignm length: 605
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 118

Conread position: 3-179
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 3-202
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 3-450
Cow position:
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 3-548
Cow position:
Alignm length: 563
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 3-559
Cow position:
Alignm length: 587
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 4-434
Cow position:
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 4-440
Cow position:
Alignm length: 454
Alignm identity: 297
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 8

Conread position: 4-444
Cow position:
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 276

Conread position: 4-446
Cow position:
Alignm length: 457
Alignm identity: 309
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 40, 218

Conread position: 6-295
Cow position:
Alignm length: 307
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 135

Conread position: 6-417
Cow position:
Alignm length: 419
Alignm identity: 285
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 178, 27

Conread position: 6-591
Cow position:
Alignm length: 623
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 140

Conread position: 8-558
Cow position:
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 9-452
Cow position:
Alignm length: 459
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 97

Conread position: 10-558
Cow position:
Alignm length: 560
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 66

Conread position: 12-286
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 284

Conread position: 31-538
Cow position:
Alignm length: 531
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 240

Conread position: 41-558
Cow position:
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 42-189
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 42-438
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 47-449
Cow position:
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 67-556
Cow position:
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 133

Conread position: 73-449
Cow position:
Alignm length: 387
Alignm identity: 257
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 109, 162

Conread position: 76-428
Cow position:
Alignm length: 371
Alignm identity: 239
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 13

Conread position: 98-593
Cow position:
Alignm length: 509
Alignm identity: 284
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 80

Conread position: 153-587
Cow position:
Alignm length: 448
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 154-451
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 74

Conread position: 159-593
Cow position:
Alignm length: 447
Alignm identity: 295
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 155, 27

Conread position: 170-583
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 208

Conread position: 170-593
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 208

Conread position: 179-547
Cow position:
Alignm length: 386
Alignm identity: 257
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 84

Conread position: 180-440
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 16, 81

Conread position: 186-438
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 46

Conread position: 213-593
Cow position:
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 216-559
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 54

Conread position: 222-539
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 32

Conread position: 229-593
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 137

Conread position: 267-593
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 5

Conread position: 271-592
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 96

Conread position: 271-592
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 96

Conread position: 275-513
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 96

Conread position: 279-444
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 92

Conread position: 329-593
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 112, 17

Conread position: 362-591
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 143, 74

Show alignments to all cow chromosomes.