Cow genome map
| Conread name: | Lym2-sn47_D04.f |
| Conread position: | 45-441 |
| Cow position: | chrX:802556-802934 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 137 |
| Conread position: | 59-441 |
| Cow position: | chrX:42558014-42558396 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 66-441 |
| Cow position: | chrX:23364629-23364241 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 71-441 |
| Cow position: | chrX:41929692-41930074 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 72-410 |
| Cow position: | chrX:34863647-34863317 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 179, 65 |
| Conread position: | 72-426 |
| Cow position: | chrX:31466300-31465956 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 72-441 |
| Cow position: | chrX:42559716-42559343 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 59 |
| Conread position: | 79-441 |
| Cow position: | chrX:42066111-42066475 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 65 |
| Conread position: | 85-430 |
| Cow position: | chrX:13259593-13259247 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 167, 60 |
| Conread position: | 86-441 |
| Cow position: | chrX:11841050-11840690 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 157 |
| Conread position: | 203-418 |
| Cow position: | chrX:25442104-25441879 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 232-438 |
| Cow position: | chrX:31919305-31919090 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 232-441 |
| Cow position: | chrX:31909105-31908886 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 232-441 |
| Cow position: | chrX:48389903-48390123 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 239-402 |
| Cow position: | chrX:25434861-25435031 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 153 |
| Conread position: | 245-441 |
| Cow position: | chrX:29774483-29774686 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 251-441 |
| Cow position: | chrX:38139239-38139042 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 274-425 |
| Cow position: | chrX:32651153-32651000 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 281-441 |
| Cow position: | chrX:25262702-25262862 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 283-403 |
| Cow position: | chrX:42915592-42915711 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 283-441 |
| Cow position: | chrX:42549630-42549792 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.