Cow genome map

Conread name: Lym2-sn47_E05.f

Conread position: 11-338
Cow position: chr1:89430057-89430383 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 256

Conread position: 12-647
Cow position: chr1:82922967-82922332 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 14-651
Cow position: chr1:38419863-38420475 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 9

Conread position: 15-387
Cow position: chr1:82911963-82911586 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 51

Conread position: 15-651
Cow position: chr1:79635792-79635163 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 54

Conread position: 16-229
Cow position: chr1:61310413-61310628 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 101, 210

Conread position: 16-387
Cow position: chr1:57696968-57696602 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 16-447
Cow position: chr1:5356318-5356759 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-484
Cow position: chr1:20525669-20526148 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 128

Conread position: 16-503
Cow position: chr1:86595302-86594806 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 162

Conread position: 16-559
Cow position: chr1:4209398-4209952 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-600
Cow position: chr1:56143143-56142558 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 91

Conread position: 16-622
Cow position: chr1:26517695-26517082 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 121

Conread position: 16-626
Cow position: chr1:46836812-46837435 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 57

Conread position: 16-633
Cow position: chr1:79111679-79112268 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 16-634
Cow position: chr1:53199735-53200362 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 461

Conread position: 16-645
Cow position: chr1:55320888-55320260 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 77

Conread position: 16-648
Cow position: chr1:55777770-55778419 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 16-649
Cow position: chr1:67833939-67833299 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 163

Conread position: 16-649
Cow position: chr1:69767770-69768413 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 540

Conread position: 16-650
Cow position: chr1:40056296-40056939 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 33

Conread position: 16-651
Cow position: chr1:5503160-5503799 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 126

Conread position: 16-651
Cow position: chr1:9259675-9260321 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-651
Cow position: chr1:17035395-17034759 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 82

Conread position: 16-651
Cow position: chr1:20830083-20830730 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 586

Conread position: 16-651
Cow position: chr1:21088623-21089266 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 183

Conread position: 16-651
Cow position: chr1:22905965-22906582 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 16-651
Cow position: chr1:24652470-24653100 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 85

Conread position: 16-651
Cow position: chr1:28874269-28874904 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 127

Conread position: 16-651
Cow position: chr1:32566732-32566095 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 16-651
Cow position: chr1:33552119-33552773 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-651
Cow position: chr1:33713261-33713917 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 66

Conread position: 16-651
Cow position: chr1:33852468-33853105 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 101

Conread position: 16-651
Cow position: chr1:33897450-33898096 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-651
Cow position: chr1:39544978-39545620 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 112

Conread position: 16-651
Cow position: chr1:40683550-40682906 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 110

Conread position: 16-651
Cow position: chr1:42737638-42738262 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 16-651
Cow position: chr1:57423642-57422996 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-651
Cow position: chr1:63604580-63603935 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 136

Conread position: 16-651
Cow position: chr1:65387513-65388148 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 16-651
Cow position: chr1:72984674-72985285 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 10

Conread position: 16-651
Cow position: chr1:73069874-73069225 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 51

Conread position: 16-651
Cow position: chr1:79455762-79455119 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 171

Conread position: 16-651
Cow position: chr1:81288325-81288971 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-651
Cow position: chr1:82477166-82477812 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-651
Cow position: chr1:85792871-85793517 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 381

Conread position: 16-651
Cow position: chr1:86546945-86546301 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 123

Conread position: 16-651
Cow position: chr1:89495026-89494394 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 212

Conread position: 16-651
Cow position: chr1:91900216-91900858 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 267

Conread position: 16-651
Cow position: chr1:94660866-94661505 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 211

Conread position: 18-381
Cow position: chr1:59934580-59934963 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 98, 41

Conread position: 18-503
Cow position: chr1:99018815-99018340 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 66

Conread position: 18-560
Cow position: chr1:85532167-85531620 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 171

Conread position: 18-631
Cow position: chr1:80357982-80357354 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 101

Conread position: 18-651
Cow position: chr1:17011540-17010902 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 130

Conread position: 18-651
Cow position: chr1:25551157-25551806 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 8

Conread position: 18-651
Cow position: chr1:93855711-93856348 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 211

Conread position: 19-357
Cow position: chr1:57663214-57663556 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 145, 100

Conread position: 19-651
Cow position: chr1:29363493-29364131 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 99

Conread position: 19-651
Cow position: chr1:55275838-55275196 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 216

Conread position: 19-651
Cow position: chr1:56724345-56724980 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 157

Conread position: 19-651
Cow position: chr1:82653859-82654488 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 29

Conread position: 22-651
Cow position: chr1:72038367-72037718 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 138

Conread position: 23-361
Cow position: chr1:86611335-86611672 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 75

Conread position: 24-275
Cow position: chr1:11860045-11859798 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 124

Conread position: 24-552
Cow position: chr1:40575410-40575937 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 94

Conread position: 24-648
Cow position: chr1:24443163-24442530 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 609

Conread position: 24-651
Cow position: chr1:17940574-17939935 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 538

Conread position: 24-651
Cow position: chr1:31364898-31364267 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 160

Conread position: 25-127
Cow position: chr1:74285588-74285486 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 25-210
Cow position: chr1:89769511-89769325 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 133

Conread position: 25-560
Cow position: chr1:38417338-38417868 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 147

Conread position: 25-621
Cow position: chr1:57658089-57658700 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 369

Conread position: 25-636
Cow position: chr1:76750766-76750151 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 25-647
Cow position: chr1:8826246-8826886 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 25-651
Cow position: chr1:3384743-3384103 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 40

Conread position: 25-651
Cow position: chr1:3934057-3933424 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 197

Conread position: 25-651
Cow position: chr1:56192963-56192324 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 117

Conread position: 25-651
Cow position: chr1:62804970-62804343 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 25-651
Cow position: chr1:72185681-72185040 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 527

Conread position: 25-651
Cow position: chr1:85779243-85778616 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 25-651
Cow position: chr1:91891920-91891285 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 25-651
Cow position: chr1:102433841-102433198 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 304

Conread position: 26-651
Cow position: chr1:30063567-30064228 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 60

Conread position: 27-560
Cow position: chr1:40511813-40511278 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 21

Conread position: 29-651
Cow position: chr1:62243450-62242819 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 144

Conread position: 31-626
Cow position: chr1:91529434-91528850 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 375
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 232, 84

Conread position: 31-648
Cow position: chr1:18241011-18240395 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 33-509
Cow position: chr1:31417296-31416814 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 118

Conread position: 33-510
Cow position: chr1:53364784-53365231 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 15

Conread position: 34-412
Cow position: chr1:18193104-18193494 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 49

Conread position: 35-651
Cow position: chr1:67326727-67326122 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 73

Conread position: 40-320
Cow position: chr1:81777639-81777925 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 45-651
Cow position: chr1:77922926-77923544 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 67-594
Cow position: chr1:67909786-67910326 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 50

Conread position: 87-483
Cow position: chr1:80445412-80445819 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 100-651
Cow position: chr1:59207797-59207243 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 23

Conread position: 110-645
Cow position: chr1:81862692-81862153 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 38

Conread position: 110-651
Cow position: chr1:67002446-67002989 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 7

Conread position: 119-651
Cow position: chr1:30074171-30074706 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 104

Conread position: 124-647
Cow position: chr1:74285372-74284847 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 21

Conread position: 125-651
Cow position: chr1:71561443-71560909 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 269

Conread position: 126-600
Cow position: chr1:9379212-9378733 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 38

Conread position: 128-383
Cow position: chr1:30282501-30282252 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 170, 64

Conread position: 140-387
Cow position: chr1:45018319-45018073 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 157, 89

Conread position: 140-552
Cow position: chr1:50248384-50247973 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 228

Conread position: 140-651
Cow position: chr1:10723899-10724414 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 110

Conread position: 147-651
Cow position: chr1:50210518-50210006 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 155-567
Cow position: chr1:22345336-22345751 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 122

Conread position: 162-625
Cow position: chr1:82565452-82565923 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 167-651
Cow position: chr1:90607535-90607029 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 380

Conread position: 173-483
Cow position: chr1:29976223-29975932 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 19

Conread position: 173-651
Cow position: chr1:57364993-57364507 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 99

Conread position: 175-651
Cow position: chr1:18026408-18025909 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 62

Conread position: 181-651
Cow position: chr1:29035661-29036134 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 100

Conread position: 183-498
Cow position: chr1:77115307-77114980 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 97

Conread position: 184-650
Cow position: chr1:21116480-21116002 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 209

Conread position: 198-651
Cow position: chr1:48248284-48248739 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 89

Conread position: 199-651
Cow position: chr1:89769161-89768706 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 116

Conread position: 204-648
Cow position: chr1:25053672-25054120 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 219-530
Cow position: chr1:27187697-27188000 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 61

Conread position: 223-630
Cow position: chr1:69416881-69416480 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 169

Conread position: 242-426
Cow position: chr1:101013050-101012857 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 262-545
Cow position: chr1:11859318-11859033 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 30

Conread position: 269-563
Cow position: chr1:76741784-76741488 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 92

Conread position: 270-651
Cow position: chr1:72137441-72137823 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 53

Conread position: 285-645
Cow position: chr1:21592052-21592418 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 282

Conread position: 294-651
Cow position: chr1:18964897-18964533 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 344

Conread position: 319-651
Cow position: chr1:77105521-77105191 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 90

Conread position: 375-651
Cow position: chr1:102550064-102550331 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 148, 0

Conread position: 402-651
Cow position: chr1:82911242-82910993 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 417-651
Cow position: chr1:30282250-30282005 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 113, 92

Conread position: 440-651
Cow position: chr1:5355311-5355100 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 473-651
Cow position: chr1:67287996-67288174 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.