Cow genome map


           Conread name:
           Lym2-sn47_E05.f
        

               Conread position:
               9-651
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 192
               

               Conread position:
               16-153
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-191
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-387
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               16-399
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               16-424
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 260
               

               Conread position:
               16-552
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 29
               

               Conread position:
               16-558
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-560
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 304
               

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               16-606
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 565
               

               Conread position:
               16-609
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 123
               

               Conread position:
               16-620
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               371
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               226, 102
               

               Conread position:
               16-631
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               16-636
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               16-639
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 381
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 309
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 315
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 127
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 309
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 144
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 426
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 8
               

               Conread position:
               17-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 236
               

               Conread position:
               18-134
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               18-321
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 223
               

               Conread position:
               18-449
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 113
               

               Conread position:
               18-607
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 167
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 45
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               19-160
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 141
               

               Conread position:
               19-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               19-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               19-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               21-631
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 150
               

               Conread position:
               23-650
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               24-481
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 128
               

               Conread position:
               24-651
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 125
               

               Conread position:
               24-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 58
               

               Conread position:
               24-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 132
               

               Conread position:
               25-376
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               25-400
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               25-541
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               341
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               25-612
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 82
               

               Conread position:
               25-647
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 304
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 136
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               26-620
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               393
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               26-651
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 35
               

               Conread position:
               27-295
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 124
               

               Conread position:
               27-585
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               28-560
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 105
               

               Conread position:
               28-649
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               28-651
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               32-387
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               262, 27
               

               Conread position:
               33-645
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 133
               

               Conread position:
               42-651
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               53-651
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 66
               

               Conread position:
               80-272
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               88-461
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 150
               

               Conread position:
               93-404
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               100-651
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               117-552
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               141-648
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 183
               

               Conread position:
               148-651
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 9
               

               Conread position:
               152-400
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               181-651
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 61
               

               Conread position:
               209-651
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 199
               

               Conread position:
               210-525
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               214-651
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 398
               

               Conread position:
               292-473
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               299-651
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               305-651
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               310-651
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               312-558
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               370-651
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-651
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               422-650
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-651
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               456-651
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.