Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 5-651 |
| Cow position: | chr13:31507825-31508471 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 114 |
| Conread position: | 16-326 |
| Cow position: | chr13:17998478-17998792 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-361 |
| Cow position: | chr13:15923460-15923110 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 16-488 |
| Cow position: | chr13:28860084-28860565 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 304 |
| Conread position: | 16-543 |
| Cow position: | chr13:2387887-2387348 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-626 |
| Cow position: | chr13:31732968-31732355 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 16-636 |
| Cow position: | chr13:17309389-17310013 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 238 |
| Conread position: | 16-651 |
| Cow position: | chr13:678670-679313 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 497 |
| Conread position: | 16-651 |
| Cow position: | chr13:13325850-13326488 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 16-651 |
| Cow position: | chr13:14402176-14401543 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 144 |
| Conread position: | 16-651 |
| Cow position: | chr13:21697173-21697829 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 172 |
| Conread position: | 16-651 |
| Cow position: | chr13:31611388-31610752 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 16-651 |
| Cow position: | chr13:31729974-31729340 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 381 |
| Conread position: | 16-651 |
| Cow position: | chr13:34041417-34040768 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-651 |
| Cow position: | chr13:49974585-49975241 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 476 |
| Conread position: | 18-651 |
| Cow position: | chr13:21839271-21838642 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 264 |
| Conread position: | 19-315 |
| Cow position: | chr13:47229076-47228775 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 19-592 |
| Cow position: | chr13:15450196-15449643 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 19-649 |
| Cow position: | chr13:48358565-48359189 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 169 |
| Conread position: | 19-650 |
| Cow position: | chr13:6667208-6666575 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 129 |
| Conread position: | 21-651 |
| Cow position: | chr13:30239244-30239912 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 23-606 |
| Cow position: | chr13:11794130-11793558 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 94 |
| Conread position: | 23-636 |
| Cow position: | chr13:43590258-43590861 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 149 |
| Conread position: | 23-651 |
| Cow position: | chr13:11797791-11797142 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 94 |
| Conread position: | 24-387 |
| Cow position: | chr13:5625058-5624692 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 144 |
| Conread position: | 24-435 |
| Cow position: | chr13:26845215-26845593 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 24-503 |
| Cow position: | chr13:25692606-25693091 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 70 |
| Conread position: | 24-636 |
| Cow position: | chr13:34938380-34938988 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 24-651 |
| Cow position: | chr13:50110381-50111023 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 104 |
| Conread position: | 25-345 |
| Cow position: | chr13:32546320-32546644 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 25-519 |
| Cow position: | chr13:4484725-4485222 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 25-524 |
| Cow position: | chr13:15543471-15543978 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 150 |
| Conread position: | 25-555 |
| Cow position: | chr13:34324625-34324109 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 68 |
| Conread position: | 25-641 |
| Cow position: | chr13:3653389-3652753 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 25-651 |
| Cow position: | chr13:4942313-4942950 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 25-651 |
| Cow position: | chr13:13900798-13901430 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 25-651 |
| Cow position: | chr13:34342835-34343471 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 25-651 |
| Cow position: | chr13:35758213-35758845 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 27-651 |
| Cow position: | chr13:32984411-32983779 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 31-474 |
| Cow position: | chr13:34909087-34908651 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 129 |
| Conread position: | 32-582 |
| Cow position: | chr13:14177906-14177358 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 48-651 |
| Cow position: | chr13:6358075-6358689 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 57-651 |
| Cow position: | chr13:3482859-3482274 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 286 |
| Conread position: | 70-539 |
| Cow position: | chr13:60699593-60699137 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 74-651 |
| Cow position: | chr13:5501021-5500434 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 245 |
| Conread position: | 102-651 |
| Cow position: | chr13:60648795-60648242 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 123-622 |
| Cow position: | chr13:42217652-42217146 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 54 |
| Conread position: | 123-651 |
| Cow position: | chr13:34764798-34764268 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 75 |
| Conread position: | 126-568 |
| Cow position: | chr13:60468457-60468909 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 145-651 |
| Cow position: | chr13:42090640-42090128 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 173-651 |
| Cow position: | chr13:50193317-50192833 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 222 |
| Conread position: | 175-651 |
| Cow position: | chr13:16253436-16252952 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 383 |
| Conread position: | 175-651 |
| Cow position: | chr13:33524870-33524391 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 185-560 |
| Cow position: | chr13:20541169-20540780 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 212 |
| Conread position: | 230-651 |
| Cow position: | chr13:60423889-60424313 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 234-651 |
| Cow position: | chr13:32736030-32735627 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 95 |
| Conread position: | 237-651 |
| Cow position: | chr13:49495033-49494614 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 302-626 |
| Cow position: | chr13:11388207-11388537 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 444-651 |
| Cow position: | chr13:3760271-3760064 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 472-651 |
| Cow position: | chr13:54240054-54239876 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.