Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 9-651 |
| Cow position: | chr14:45028203-45027562 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 89 |
| Conread position: | 11-648 |
| Cow position: | chr14:13303750-13304393 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 11-651 |
| Cow position: | chr14:1659246-1659895 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 228 |
| Conread position: | 11-651 |
| Cow position: | chr14:48253523-48252887 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 151 |
| Conread position: | 16-183 |
| Cow position: | chr14:2285124-2285294 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-278 |
| Cow position: | chr14:17490663-17490398 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-303 |
| Cow position: | chr14:13462315-13462607 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 152 |
| Conread position: | 16-356 |
| Cow position: | chr14:40168936-40168600 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 150 |
| Conread position: | 16-486 |
| Cow position: | chr14:44227171-44227652 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 16-503 |
| Cow position: | chr14:10147669-10148167 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-536 |
| Cow position: | chr14:10520703-10520198 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 100, 132 |
| Conread position: | 16-538 |
| Cow position: | chr14:47940194-47939654 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 103 |
| Conread position: | 16-568 |
| Cow position: | chr14:9046372-9046937 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-568 |
| Cow position: | chr14:12124388-12123825 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-631 |
| Cow position: | chr14:16918922-16918301 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 143 |
| Conread position: | 16-636 |
| Cow position: | chr14:44552648-44553256 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 16-639 |
| Cow position: | chr14:15275054-15274413 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 551 |
| Conread position: | 16-649 |
| Cow position: | chr14:48826082-48826713 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 134 |
| Conread position: | 16-651 |
| Cow position: | chr14:751361-752005 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 397 |
| Conread position: | 16-651 |
| Cow position: | chr14:5513733-5514367 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 151 |
| Conread position: | 16-651 |
| Cow position: | chr14:5529857-5530498 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 214 |
| Conread position: | 16-651 |
| Cow position: | chr14:11153356-11152713 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 319 |
| Conread position: | 16-651 |
| Cow position: | chr14:13863300-13862662 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 147 |
| Conread position: | 16-651 |
| Cow position: | chr14:19327466-19326822 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 16-651 |
| Cow position: | chr14:27978156-27978796 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 208 |
| Conread position: | 16-651 |
| Cow position: | chr14:33677865-33678502 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 34 |
| Conread position: | 16-651 |
| Cow position: | chr14:38147801-38148429 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 16-651 |
| Cow position: | chr14:45671251-45670591 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 17-221 |
| Cow position: | chr14:33393001-33392794 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 17-651 |
| Cow position: | chr14:17760083-17759459 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 125 |
| Conread position: | 18-626 |
| Cow position: | chr14:21744898-21745486 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 18-647 |
| Cow position: | chr14:13779746-13780388 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 18-649 |
| Cow position: | chr14:44775240-44774637 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 49 |
| Conread position: | 18-651 |
| Cow position: | chr14:45710926-45710298 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 140 |
| Conread position: | 19-357 |
| Cow position: | chr14:46391732-46391400 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 100 |
| Conread position: | 19-463 |
| Cow position: | chr14:16272496-16272043 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 19-651 |
| Cow position: | chr14:22030646-22030012 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 141 |
| Conread position: | 23-519 |
| Cow position: | chr14:33402494-33402988 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 91 |
| Conread position: | 23-579 |
| Cow position: | chr14:12611233-12611778 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 78 |
| Conread position: | 23-651 |
| Cow position: | chr14:46466486-46467097 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 96 |
| Conread position: | 24-412 |
| Cow position: | chr14:40341861-40342258 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 65 |
| Conread position: | 24-560 |
| Cow position: | chr14:45207108-45207629 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 24-651 |
| Cow position: | chr14:23256551-23255921 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 131 |
| Conread position: | 24-651 |
| Cow position: | chr14:29775277-29774682 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 24-651 |
| Cow position: | chr14:48601531-48600912 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 25-432 |
| Cow position: | chr14:50111599-50112025 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 25-640 |
| Cow position: | chr14:17687309-17687925 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 55 |
| Conread position: | 25-651 |
| Cow position: | chr14:17000253-16999611 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 83 |
| Conread position: | 25-651 |
| Cow position: | chr14:30595564-30594914 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 177 |
| Conread position: | 26-644 |
| Cow position: | chr14:44255951-44255357 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 140 |
| Conread position: | 26-648 |
| Cow position: | chr14:20783261-20783904 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 610 |
| Conread position: | 28-648 |
| Cow position: | chr14:7473160-7473789 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 34-651 |
| Cow position: | chr14:13579207-13579797 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 48 |
| Conread position: | 39-648 |
| Cow position: | chr14:190863-191487 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 215 |
| Conread position: | 57-499 |
| Cow position: | chr14:27990766-27990333 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 62-651 |
| Cow position: | chr14:45188952-45188371 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 86-426 |
| Cow position: | chr14:30666342-30666682 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 89-651 |
| Cow position: | chr14:44289936-44290504 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 105-400 |
| Cow position: | chr14:30583707-30583414 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 193, 18 |
| Conread position: | 118-357 |
| Cow position: | chr14:31882358-31882599 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 131-651 |
| Cow position: | chr14:18417419-18417943 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 175-651 |
| Cow position: | chr14:44380299-44380786 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 281 |
| Conread position: | 176-651 |
| Cow position: | chr14:2287224-2287705 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 218 |
| Conread position: | 183-648 |
| Cow position: | chr14:12742081-12741609 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 324 |
| Conread position: | 214-651 |
| Cow position: | chr14:16342901-16342461 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 244-651 |
| Cow position: | chr14:16808297-16807883 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 358 |
| Conread position: | 256-651 |
| Cow position: | chr14:9102569-9102967 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 266-651 |
| Cow position: | chr14:11476240-11475850 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 284-651 |
| Cow position: | chr14:17490273-17489900 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 193 |
| Conread position: | 339-651 |
| Cow position: | chr14:33392797-33392484 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 394-651 |
| Cow position: | chr14:46390446-46390191 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 143, 0 |
Show alignments to all cow chromosomes.