Cow genome map

Conread name: Lym2-sn47_E05.f

Conread position: 15-651
Cow position:
Alignm length: 650
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 270

Conread position: 16-217
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 16-321
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 16-324
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-326
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-351
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 128

Conread position: 16-353
Cow position:
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 104

Conread position: 16-357
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 237

Conread position: 16-400
Cow position:
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 389

Conread position: 16-425
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 16-434
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 16-498
Cow position:
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 40

Conread position: 16-609
Cow position:
Alignm length: 626
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 65

Conread position: 16-622
Cow position:
Alignm length: 618
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-626
Cow position:
Alignm length: 641
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 98

Conread position: 16-636
Cow position:
Alignm length: 627
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 16-648
Cow position:
Alignm length: 652
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 151

Conread position: 16-649
Cow position:
Alignm length: 651
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 160

Conread position: 16-651
Cow position:
Alignm length: 668
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 232

Conread position: 16-651
Cow position:
Alignm length: 642
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 135

Conread position: 16-651
Cow position:
Alignm length: 653
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 16-651
Cow position:
Alignm length: 649
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 126

Conread position: 16-651
Cow position:
Alignm length: 645
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 491

Conread position: 16-651
Cow position:
Alignm length: 652
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 129

Conread position: 16-651
Cow position:
Alignm length: 647
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 46

Conread position: 16-651
Cow position:
Alignm length: 646
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 210

Conread position: 16-651
Cow position:
Alignm length: 657
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 252

Conread position: 16-651
Cow position:
Alignm length: 644
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 110

Conread position: 16-651
Cow position:
Alignm length: 657
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 304

Conread position: 17-541
Cow position:
Alignm length: 543
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 106

Conread position: 17-651
Cow position:
Alignm length: 644
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 18-600
Cow position:
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 239

Conread position: 19-651
Cow position:
Alignm length: 643
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 89

Conread position: 20-604
Cow position:
Alignm length: 596
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 172

Conread position: 23-538
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 20

Conread position: 24-651
Cow position:
Alignm length: 643
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 83

Conread position: 25-523
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 76

Conread position: 25-552
Cow position:
Alignm length: 541
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 256

Conread position: 25-645
Cow position:
Alignm length: 635
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 252

Conread position: 25-651
Cow position:
Alignm length: 641
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 25-651
Cow position:
Alignm length: 650
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 247

Conread position: 25-651
Cow position:
Alignm length: 644
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 69

Conread position: 25-651
Cow position:
Alignm length: 641
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 137

Conread position: 25-651
Cow position:
Alignm length: 643
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 161

Conread position: 25-651
Cow position:
Alignm length: 635
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 126

Conread position: 25-651
Cow position:
Alignm length: 632
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 25-651
Cow position:
Alignm length: 640
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 129

Conread position: 26-221
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 93

Conread position: 26-460
Cow position:
Alignm length: 446
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 136

Conread position: 26-651
Cow position:
Alignm length: 640
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 194

Conread position: 26-651
Cow position:
Alignm length: 637
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 24

Conread position: 27-358
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 88

Conread position: 27-626
Cow position:
Alignm length: 606
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 27-648
Cow position:
Alignm length: 641
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 31-651
Cow position:
Alignm length: 626
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 66

Conread position: 37-651
Cow position:
Alignm length: 634
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 41-651
Cow position:
Alignm length: 618
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 41

Conread position: 45-651
Cow position:
Alignm length: 622
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 54-651
Cow position:
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 94

Conread position: 57-552
Cow position:
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 176

Conread position: 58-392
Cow position:
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 84-651
Cow position:
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 22

Conread position: 100-598
Cow position:
Alignm length: 509
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 106-651
Cow position:
Alignm length: 558
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 81

Conread position: 115-651
Cow position:
Alignm length: 544
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 107

Conread position: 120-651
Cow position:
Alignm length: 537
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 28

Conread position: 127-651
Cow position:
Alignm length: 542
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 77

Conread position: 128-651
Cow position:
Alignm length: 539
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 240

Conread position: 141-651
Cow position:
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 93

Conread position: 153-649
Cow position:
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 98

Conread position: 170-651
Cow position:
Alignm length: 515
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 138

Conread position: 175-651
Cow position:
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 215

Conread position: 180-568
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 160

Conread position: 192-651
Cow position:
Alignm length: 466
Alignm identity: 291
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 41

Conread position: 229-651
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 133

Conread position: 258-606
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 101

Conread position: 264-651
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 323-651
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 332-651
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 393-651
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 432-651
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.