Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 16-290 |
| Cow position: | chr18:51661577-51661852 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 85 |
| Conread position: | 16-357 |
| Cow position: | chr18:16079906-16080253 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 16-377 |
| Cow position: | chr18:40479629-40479992 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 16-387 |
| Cow position: | chr18:11273881-11273505 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 179 |
| Conread position: | 16-467 |
| Cow position: | chr18:54022895-54022438 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 16-536 |
| Cow position: | chr18:41839577-41839056 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 16-546 |
| Cow position: | chr18:16392846-16392340 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 16-623 |
| Cow position: | chr18:32768986-32769571 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 147 |
| Conread position: | 16-647 |
| Cow position: | chr18:51461817-51461177 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 210 |
| Conread position: | 16-651 |
| Cow position: | chr18:16175382-16174742 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 16-651 |
| Cow position: | chr18:19353596-19354245 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 16-651 |
| Cow position: | chr18:23798883-23799522 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 16-651 |
| Cow position: | chr18:29865375-29864733 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 215 |
| Conread position: | 16-651 |
| Cow position: | chr18:33270178-33270777 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 103 |
| Conread position: | 16-651 |
| Cow position: | chr18:37507193-37507841 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 207 |
| Conread position: | 16-651 |
| Cow position: | chr18:51342922-51343561 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 16-651 |
| Cow position: | chr18:51482105-51482732 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 132 |
| Conread position: | 18-293 |
| Cow position: | chr18:51614413-51614138 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 19-651 |
| Cow position: | chr18:47742741-47743369 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 452 |
| Conread position: | 19-651 |
| Cow position: | chr18:54004933-54004300 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 107 |
| Conread position: | 23-651 |
| Cow position: | chr18:29238139-29238763 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 195 |
| Conread position: | 24-650 |
| Cow position: | chr18:54170267-54169646 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 373 |
| Conread position: | 25-518 |
| Cow position: | chr18:56013822-56014320 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 25-651 |
| Cow position: | chr18:14417224-14417847 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 27-355 |
| Cow position: | chr18:54271728-54272058 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 28-560 |
| Cow position: | chr18:35313616-35314149 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 220 |
| Conread position: | 31-651 |
| Cow position: | chr18:46876081-46875491 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 403 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 85, 162 |
| Conread position: | 55-651 |
| Cow position: | chr18:27988458-27989064 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 271 |
| Conread position: | 56-626 |
| Cow position: | chr18:16089395-16089973 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 62-651 |
| Cow position: | chr18:36509895-36510495 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 419 |
| Conread position: | 71-387 |
| Cow position: | chr18:5079191-5078880 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 48 |
| Conread position: | 73-606 |
| Cow position: | chr18:51694992-51695536 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 102-546 |
| Cow position: | chr18:26245300-26244849 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 114-651 |
| Cow position: | chr18:4947310-4947825 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 36 |
| Conread position: | 149-552 |
| Cow position: | chr18:51274707-51274301 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 151-650 |
| Cow position: | chr18:37490200-37490699 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 157-648 |
| Cow position: | chr18:19485523-19486018 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 230-651 |
| Cow position: | chr18:5534460-5534884 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 272-651 |
| Cow position: | chr18:24617629-24618011 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 292-636 |
| Cow position: | chr18:27538375-27538726 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 402-651 |
| Cow position: | chr18:11273228-11272980 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 430-651 |
| Cow position: | chr18:23660844-23660623 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.