Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 11-651 |
| Cow position: | chr19:20105960-20106609 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 217 |
| Conread position: | 14-356 |
| Cow position: | chr19:33653489-33653156 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 16-153 |
| Cow position: | chr19:32194265-32194405 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 16-154 |
| Cow position: | chr19:167319-167178 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-222 |
| Cow position: | chr19:3174054-3174263 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-362 |
| Cow position: | chr19:33527351-33527702 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 16-446 |
| Cow position: | chr19:256502-256939 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 266 |
| Conread position: | 16-485 |
| Cow position: | chr19:40816273-40815794 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 326 |
| Conread position: | 16-534 |
| Cow position: | chr19:32210836-32210306 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 196 |
| Conread position: | 16-587 |
| Cow position: | chr19:438201-437620 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 214 |
| Conread position: | 16-597 |
| Cow position: | chr19:5249500-5248913 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 178 |
| Conread position: | 16-651 |
| Cow position: | chr19:773838-774487 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 16-651 |
| Cow position: | chr19:4386853-4387484 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 16-651 |
| Cow position: | chr19:5730110-5730726 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 93 |
| Conread position: | 16-651 |
| Cow position: | chr19:9706922-9706285 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 16-651 |
| Cow position: | chr19:12774352-12774987 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 16-651 |
| Cow position: | chr19:52150446-52149799 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 381 |
| Conread position: | 18-385 |
| Cow position: | chr19:43144954-43145321 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 266 |
| Conread position: | 18-651 |
| Cow position: | chr19:376480-375840 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 19-550 |
| Cow position: | chr19:39541-40078 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 183 |
| Conread position: | 19-649 |
| Cow position: | chr19:7343310-7343948 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 310 |
| Conread position: | 19-651 |
| Cow position: | chr19:39667287-39666668 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 100 |
| Conread position: | 23-648 |
| Cow position: | chr19:1587991-1587357 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 94 |
| Conread position: | 23-648 |
| Cow position: | chr19:28405455-28404853 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 23-651 |
| Cow position: | chr19:161884-161266 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 24-465 |
| Cow position: | chr19:50723801-50724244 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 103 |
| Conread position: | 24-651 |
| Cow position: | chr19:5900264-5899627 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 532 |
| Conread position: | 25-649 |
| Cow position: | chr19:6713480-6712837 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 430 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 209, 95 |
| Conread position: | 25-651 |
| Cow position: | chr19:892377-891756 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 25-651 |
| Cow position: | chr19:39184293-39183661 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 101 |
| Conread position: | 26-254 |
| Cow position: | chr19:48860963-48860731 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 27-382 |
| Cow position: | chr19:7489602-7489964 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 27-651 |
| Cow position: | chr19:173506-174142 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 206 |
| Conread position: | 36-644 |
| Cow position: | chr19:205763-206388 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 64-648 |
| Cow position: | chr19:33942857-33943447 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 86-651 |
| Cow position: | chr19:16319322-16318746 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 264-651 |
| Cow position: | chr19:1583739-1584136 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 341-616 |
| Cow position: | chr19:42582886-42582609 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 416-650 |
| Cow position: | chr19:43146307-43146541 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.