Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 16-166 |
| Cow position: | chr20:8973620-8973467 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-175 |
| Cow position: | chr20:40259499-40259661 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-294 |
| Cow position: | chr20:5791538-5791804 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 16-294 |
| Cow position: | chr20:13678847-13678566 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 16-300 |
| Cow position: | chr20:14869758-14869479 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 16-511 |
| Cow position: | chr20:12569721-12570212 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 151 |
| Conread position: | 16-538 |
| Cow position: | chr20:871808-871293 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 216 |
| Conread position: | 16-648 |
| Cow position: | chr20:23800084-23800725 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 16-650 |
| Cow position: | chr20:18967699-18968319 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 16-651 |
| Cow position: | chr20:823971-824611 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 16-651 |
| Cow position: | chr20:5536136-5536788 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 110 |
| Conread position: | 16-651 |
| Cow position: | chr20:13764101-13764740 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 16-651 |
| Cow position: | chr20:13787258-13787882 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 103 |
| Conread position: | 16-651 |
| Cow position: | chr20:15293189-15293825 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 16-651 |
| Cow position: | chr20:23468463-23467824 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 146 |
| Conread position: | 16-651 |
| Cow position: | chr20:25849622-25848989 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 137 |
| Conread position: | 16-651 |
| Cow position: | chr20:29949717-29950369 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 16-651 |
| Cow position: | chr20:30429469-30430113 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 612 |
| Conread position: | 17-447 |
| Cow position: | chr20:19355967-19356398 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 217 |
| Conread position: | 17-651 |
| Cow position: | chr20:15066670-15067291 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 18-569 |
| Cow position: | chr20:10854137-10853590 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 176 |
| Conread position: | 19-651 |
| Cow position: | chr20:17660540-17659899 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 307 |
| Conread position: | 19-651 |
| Cow position: | chr20:19439117-19439760 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 20-492 |
| Cow position: | chr20:27896824-27896363 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 138 |
| Conread position: | 24-304 |
| Cow position: | chr20:13433167-13432891 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 187, 90 |
| Conread position: | 25-558 |
| Cow position: | chr20:27870412-27870959 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 216 |
| Conread position: | 25-651 |
| Cow position: | chr20:30686781-30687425 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 611 |
| Conread position: | 26-651 |
| Cow position: | chr20:21915840-21916481 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 374 |
| Conread position: | 27-442 |
| Cow position: | chr20:9520928-9520517 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 339 |
| Conread position: | 27-651 |
| Cow position: | chr20:16178557-16177905 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 31-361 |
| Cow position: | chr20:19340854-19341179 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 55 |
| Conread position: | 38-651 |
| Cow position: | chr20:15096668-15096049 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 41-651 |
| Cow position: | chr20:32120559-32121156 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 53-546 |
| Cow position: | chr20:21395156-21395650 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 53-651 |
| Cow position: | chr20:24615655-24615065 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 64-387 |
| Cow position: | chr20:27338446-27338773 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 302 |
| Conread position: | 110-651 |
| Cow position: | chr20:26054403-26053847 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 170-651 |
| Cow position: | chr20:8972823-8972327 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 170-651 |
| Cow position: | chr20:41364280-41363799 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 20 |
| Conread position: | 245-648 |
| Cow position: | chr20:35126091-35126497 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 298 |
| Conread position: | 255-631 |
| Cow position: | chr20:21717865-21718257 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 376 |
| Conread position: | 270-651 |
| Cow position: | chr20:13793484-13793861 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 280-521 |
| Cow position: | chr20:30386614-30386365 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 154 |
| Conread position: | 283-651 |
| Cow position: | chr20:20441483-20441107 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 289-626 |
| Cow position: | chr20:13678366-13678021 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 303-650 |
| Cow position: | chr20:35018437-35018774 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 345-651 |
| Cow position: | chr20:25899224-25899532 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 364-651 |
| Cow position: | chr20:10101464-10101178 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 76 |
Show alignments to all cow chromosomes.