Cow genome map

Conread name: Lym2-sn47_E05.f

Conread position: 16-166
Cow position: chr20:8973620-8973467 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 16-175
Cow position: chr20:40259499-40259661 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 16-294
Cow position: chr20:5791538-5791804 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 16-294
Cow position: chr20:13678847-13678566 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 150

Conread position: 16-300
Cow position: chr20:14869758-14869479 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 100, 142

Conread position: 16-511
Cow position: chr20:12569721-12570212 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 151

Conread position: 16-538
Cow position: chr20:871808-871293 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 216

Conread position: 16-648
Cow position: chr20:23800084-23800725 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 64

Conread position: 16-650
Cow position: chr20:18967699-18968319 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 16-651
Cow position: chr20:823971-824611 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 16

Conread position: 16-651
Cow position: chr20:5536136-5536788 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 110

Conread position: 16-651
Cow position: chr20:13764101-13764740 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 16-651
Cow position: chr20:13787258-13787882 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 103

Conread position: 16-651
Cow position: chr20:15293189-15293825 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 92

Conread position: 16-651
Cow position: chr20:23468463-23467824 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 146

Conread position: 16-651
Cow position: chr20:25849622-25848989 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 137

Conread position: 16-651
Cow position: chr20:29949717-29950369 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 40

Conread position: 16-651
Cow position: chr20:30429469-30430113 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 612

Conread position: 17-447
Cow position: chr20:19355967-19356398 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 217

Conread position: 17-651
Cow position: chr20:15066670-15067291 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 10

Conread position: 18-569
Cow position: chr20:10854137-10853590 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 176

Conread position: 19-651
Cow position: chr20:17660540-17659899 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 307

Conread position: 19-651
Cow position: chr20:19439117-19439760 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 20-492
Cow position: chr20:27896824-27896363 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 138

Conread position: 24-304
Cow position: chr20:13433167-13432891 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 187, 90

Conread position: 25-558
Cow position: chr20:27870412-27870959 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 216

Conread position: 25-651
Cow position: chr20:30686781-30687425 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 611

Conread position: 26-651
Cow position: chr20:21915840-21916481 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 374

Conread position: 27-442
Cow position: chr20:9520928-9520517 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 339

Conread position: 27-651
Cow position: chr20:16178557-16177905 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 83

Conread position: 31-361
Cow position: chr20:19340854-19341179 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 38-651
Cow position: chr20:15096668-15096049 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 41-651
Cow position: chr20:32120559-32121156 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 106

Conread position: 53-546
Cow position: chr20:21395156-21395650 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 53-651
Cow position: chr20:24615655-24615065 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 29

Conread position: 64-387
Cow position: chr20:27338446-27338773 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 302

Conread position: 110-651
Cow position: chr20:26054403-26053847 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 7

Conread position: 170-651
Cow position: chr20:8972823-8972327 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 170-651
Cow position: chr20:41364280-41363799 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 20

Conread position: 245-648
Cow position: chr20:35126091-35126497 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 298

Conread position: 255-631
Cow position: chr20:21717865-21718257 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 376

Conread position: 270-651
Cow position: chr20:13793484-13793861 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 280-521
Cow position: chr20:30386614-30386365 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 154

Conread position: 283-651
Cow position: chr20:20441483-20441107 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 289-626
Cow position: chr20:13678366-13678021 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 303-650
Cow position: chr20:35018437-35018774 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 36

Conread position: 345-651
Cow position: chr20:25899224-25899532 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 364-651
Cow position: chr20:10101464-10101178 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 76

Show alignments to all cow chromosomes.