Cow genome map
| Conread name: | Lym2-sn47_E05.f |
| Conread position: | 2-644 |
| Cow position: | chr22:44348730-44348090 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 11-348 |
| Cow position: | chr22:38550526-38550861 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 132 |
| Conread position: | 11-651 |
| Cow position: | chr22:18028422-18029054 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 237 |
| Conread position: | 11-651 |
| Cow position: | chr22:20239705-20239054 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 16-187 |
| Cow position: | chr22:30677546-30677371 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-217 |
| Cow position: | chr22:19320155-19320359 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-315 |
| Cow position: | chr22:6602092-6601801 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 264, 99 |
| Conread position: | 16-345 |
| Cow position: | chr22:19536693-19537025 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 16-357 |
| Cow position: | chr22:7304514-7304170 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 16-490 |
| Cow position: | chr22:24951696-24952181 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 16-571 |
| Cow position: | chr22:8737194-8736645 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 16-606 |
| Cow position: | chr22:10908697-10908097 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 540 |
| Conread position: | 16-606 |
| Cow position: | chr22:27308635-27308038 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 132 |
| Conread position: | 16-626 |
| Cow position: | chr22:23801062-23800478 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 54 |
| Conread position: | 16-630 |
| Cow position: | chr22:21195350-21194733 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 101 |
| Conread position: | 16-630 |
| Cow position: | chr22:37268307-37268929 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 183 |
| Conread position: | 16-645 |
| Cow position: | chr22:21035248-21034616 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 16-649 |
| Cow position: | chr22:316654-317268 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 16-650 |
| Cow position: | chr22:1268619-1267969 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 372 |
| Conread position: | 16-651 |
| Cow position: | chr22:694763-695404 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 102 |
| Conread position: | 16-651 |
| Cow position: | chr22:1519879-1519248 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 185 |
| Conread position: | 16-651 |
| Cow position: | chr22:1879946-1880589 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 16-651 |
| Cow position: | chr22:3277218-3276572 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 381 |
| Conread position: | 16-651 |
| Cow position: | chr22:6021806-6022435 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 139 |
| Conread position: | 16-651 |
| Cow position: | chr22:11803912-11803269 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 328 |
| Conread position: | 16-651 |
| Cow position: | chr22:44397574-44398214 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 136 |
| Conread position: | 16-651 |
| Cow position: | chr22:44492194-44492833 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 380 |
| Conread position: | 18-651 |
| Cow position: | chr22:33351823-33352437 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 60 |
| Conread position: | 18-651 |
| Cow position: | chr22:37292520-37291892 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 19-510 |
| Cow position: | chr22:45582062-45582553 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 19-648 |
| Cow position: | chr22:34169483-34170116 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 153 |
| Conread position: | 19-651 |
| Cow position: | chr22:3803328-3803965 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 23-225 |
| Cow position: | chr22:40370594-40370789 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 23-651 |
| Cow position: | chr22:44368324-44367697 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 95 |
| Conread position: | 24-533 |
| Cow position: | chr22:12730538-12730027 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 134 |
| Conread position: | 24-644 |
| Cow position: | chr22:1281568-1280957 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 37 |
| Conread position: | 24-649 |
| Cow position: | chr22:538253-538891 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 248 |
| Conread position: | 24-649 |
| Cow position: | chr22:13773685-13774297 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 24-650 |
| Cow position: | chr22:13547623-13547000 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 24-651 |
| Cow position: | chr22:15852565-15853205 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 24-651 |
| Cow position: | chr22:46580570-46579932 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 25-414 |
| Cow position: | chr22:6501986-6501601 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 25-464 |
| Cow position: | chr22:18815215-18814767 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 25-600 |
| Cow position: | chr22:6332860-6333444 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 301 |
| Conread position: | 25-645 |
| Cow position: | chr22:31333897-31333270 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 25-648 |
| Cow position: | chr22:39468368-39467734 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 25-651 |
| Cow position: | chr22:326039-325389 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 25-651 |
| Cow position: | chr22:36860389-36859764 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 194 |
| Conread position: | 25-651 |
| Cow position: | chr22:46585415-46584784 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 142 |
| Conread position: | 26-643 |
| Cow position: | chr22:17327305-17326681 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 26-651 |
| Cow position: | chr22:42992326-42992954 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 136 |
| Conread position: | 27-358 |
| Cow position: | chr22:8120928-8120603 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 123 |
| Conread position: | 27-648 |
| Cow position: | chr22:522243-521610 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 358 |
| Conread position: | 35-278 |
| Cow position: | chr22:38960061-38960293 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 64-651 |
| Cow position: | chr22:46614492-46615087 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 75-633 |
| Cow position: | chr22:16202111-16202679 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 465 |
| Conread position: | 80-568 |
| Cow position: | chr22:3305393-3304902 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 89-651 |
| Cow position: | chr22:15352094-15352650 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 93-399 |
| Cow position: | chr22:11033331-11033617 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 106-651 |
| Cow position: | chr22:296687-297232 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 108 |
| Conread position: | 126-645 |
| Cow position: | chr22:29012010-29011496 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 63 |
| Conread position: | 132-651 |
| Cow position: | chr22:21590678-21591207 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 143-649 |
| Cow position: | chr22:30128855-30129361 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 137 |
| Conread position: | 143-649 |
| Cow position: | chr22:30146504-30147010 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 137 |
| Conread position: | 150-351 |
| Cow position: | chr22:37141436-37141632 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 170-400 |
| Cow position: | chr22:44458245-44458476 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 146 |
| Conread position: | 170-487 |
| Cow position: | chr22:44478056-44478363 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 173-651 |
| Cow position: | chr22:13766665-13767148 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 135 |
| Conread position: | 174-651 |
| Cow position: | chr22:30677419-30676929 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 206-632 |
| Cow position: | chr22:11807411-11806976 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 295 |
| Conread position: | 210-400 |
| Cow position: | chr22:40370813-40370999 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 244-651 |
| Cow position: | chr22:14824321-14823918 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 255-651 |
| Cow position: | chr22:36276959-36277355 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 257-651 |
| Cow position: | chr22:5313663-5314073 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 378 |
| Conread position: | 257-651 |
| Cow position: | chr22:45014734-45015130 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 268-636 |
| Cow position: | chr22:1323554-1323920 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 277-651 |
| Cow position: | chr22:23752303-23751926 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 174 |
| Conread position: | 303-651 |
| Cow position: | chr22:32283252-32282897 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 310-651 |
| Cow position: | chr22:2563316-2562974 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 312-606 |
| Cow position: | chr22:34601032-34601326 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 193 |
| Conread position: | 320-651 |
| Cow position: | chr22:29037119-29037446 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 372-651 |
| Cow position: | chr22:29499042-29499325 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 404-560 |
| Cow position: | chr22:40371582-40371734 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 416-651 |
| Cow position: | chr22:21336504-21336739 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-651 |
| Cow position: | chr22:29853448-29853638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.