Cow genome map

Conread name: Lym2-sn47_E05.f

Conread position: 9-436
Cow position: chr23:14777826-14777401 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 110

Conread position: 14-636
Cow position: chr23:965355-964732 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 23

Conread position: 15-651
Cow position: chr23:11779919-11780560 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 124

Conread position: 16-200
Cow position: chr23:4361164-4361350 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 36

Conread position: 16-294
Cow position: chr23:14923159-14922878 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 16-321
Cow position: chr23:29451212-29450906 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 150

Conread position: 16-538
Cow position: chr23:618330-617829 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 32

Conread position: 16-606
Cow position: chr23:30237408-30238027 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 216

Conread position: 16-649
Cow position: chr23:13512247-13512853 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 102

Conread position: 16-650
Cow position: chr23:31648882-31648252 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 103

Conread position: 16-651
Cow position: chr23:2025942-2025300 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Conread position: 16-651
Cow position: chr23:2794117-2793490 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 10

Conread position: 16-651
Cow position: chr23:15526707-15527361 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 36

Conread position: 16-651
Cow position: chr23:41142090-41141446 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 18-386
Cow position: chr23:37716644-37717010 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 69, 61

Conread position: 19-387
Cow position: chr23:3707268-3707634 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 141

Conread position: 19-650
Cow position: chr23:14972832-14972175 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 120

Conread position: 19-651
Cow position: chr23:11714728-11714085 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 19-651
Cow position: chr23:20155070-20154446 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 82

Conread position: 19-651
Cow position: chr23:28218561-28219215 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 23-645
Cow position: chr23:16054925-16055549 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 203

Conread position: 23-649
Cow position: chr23:1022811-1022180 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 23-651
Cow position: chr23:5873429-5872791 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 24-436
Cow position: chr23:19949443-19949021 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 24-650
Cow position: chr23:22146163-22145526 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 391

Conread position: 24-651
Cow position: chr23:16498092-16497472 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 183

Conread position: 25-464
Cow position: chr23:2718460-2718907 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 42

Conread position: 25-651
Cow position: chr23:3879936-3879305 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 94

Conread position: 25-651
Cow position: chr23:4818171-4818801 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 258

Conread position: 25-651
Cow position: chr23:4889835-4890463 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 201

Conread position: 25-651
Cow position: chr23:19490692-19491332 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 265

Conread position: 25-651
Cow position: chr23:36030228-36029603 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 27

Conread position: 26-281
Cow position: chr23:19451297-19451550 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 45

Conread position: 29-651
Cow position: chr23:1012648-1012041 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 56-503
Cow position: chr23:38691668-38692124 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 170

Conread position: 85-651
Cow position: chr23:7314114-7314691 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 126-651
Cow position: chr23:23172028-23172557 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 67

Conread position: 140-284
Cow position: chr23:27647410-27647554 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 149-651
Cow position: chr23:4639317-4638817 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 15

Conread position: 183-552
Cow position: chr23:4434957-4435337 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 76

Conread position: 230-651
Cow position: chr23:1957520-1957941 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 270

Conread position: 231-651
Cow position: chr23:28304272-28304696 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 258-651
Cow position: chr23:32351382-32350981 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 269-387
Cow position: chr23:26159255-26159138 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 75

Conread position: 280-651
Cow position: chr23:15041167-15040788 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 82

Conread position: 306-651
Cow position: chr23:608144-608493 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 193

Conread position: 397-651
Cow position: chr23:3707930-3708183 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 173, 0

Conread position: 474-651
Cow position: chr23:1340198-1340021 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.