Cow genome map
Conread name: | Lym2-sn47_E05.f |
Conread position: | 9-436 |
Cow position: | chr23:14777826-14777401 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 110 |
Conread position: | 14-636 |
Cow position: | chr23:965355-964732 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 23 |
Conread position: | 15-651 |
Cow position: | chr23:11779919-11780560 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 124 |
Conread position: | 16-200 |
Cow position: | chr23:4361164-4361350 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 139 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 100, 36 |
Conread position: | 16-294 |
Cow position: | chr23:14923159-14922878 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 16-321 |
Cow position: | chr23:29451212-29450906 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 150 |
Conread position: | 16-538 |
Cow position: | chr23:618330-617829 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 32 |
Conread position: | 16-606 |
Cow position: | chr23:30237408-30238027 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 216 |
Conread position: | 16-649 |
Cow position: | chr23:13512247-13512853 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 102 |
Conread position: | 16-650 |
Cow position: | chr23:31648882-31648252 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 103 |
Conread position: | 16-651 |
Cow position: | chr23:2025942-2025300 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 10 |
Conread position: | 16-651 |
Cow position: | chr23:2794117-2793490 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 10 |
Conread position: | 16-651 |
Cow position: | chr23:15526707-15527361 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 36 |
Conread position: | 16-651 |
Cow position: | chr23:41142090-41141446 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 45 |
Conread position: | 18-386 |
Cow position: | chr23:37716644-37717010 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 249 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 69, 61 |
Conread position: | 19-387 |
Cow position: | chr23:3707268-3707634 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 141 |
Conread position: | 19-650 |
Cow position: | chr23:14972832-14972175 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 120 |
Conread position: | 19-651 |
Cow position: | chr23:11714728-11714085 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 19-651 |
Cow position: | chr23:20155070-20154446 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 82 |
Conread position: | 19-651 |
Cow position: | chr23:28218561-28219215 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 23-645 |
Cow position: | chr23:16054925-16055549 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 203 |
Conread position: | 23-649 |
Cow position: | chr23:1022811-1022180 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 9 |
Conread position: | 23-651 |
Cow position: | chr23:5873429-5872791 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 24-436 |
Cow position: | chr23:19949443-19949021 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 24-650 |
Cow position: | chr23:22146163-22145526 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 391 |
Conread position: | 24-651 |
Cow position: | chr23:16498092-16497472 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 183 |
Conread position: | 25-464 |
Cow position: | chr23:2718460-2718907 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 42 |
Conread position: | 25-651 |
Cow position: | chr23:3879936-3879305 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 94 |
Conread position: | 25-651 |
Cow position: | chr23:4818171-4818801 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 258 |
Conread position: | 25-651 |
Cow position: | chr23:4889835-4890463 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 201 |
Conread position: | 25-651 |
Cow position: | chr23:19490692-19491332 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 265 |
Conread position: | 25-651 |
Cow position: | chr23:36030228-36029603 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 27 |
Conread position: | 26-281 |
Cow position: | chr23:19451297-19451550 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 181 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 37, 45 |
Conread position: | 29-651 |
Cow position: | chr23:1012648-1012041 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 99 |
Conread position: | 56-503 |
Cow position: | chr23:38691668-38692124 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 170 |
Conread position: | 85-651 |
Cow position: | chr23:7314114-7314691 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 126-651 |
Cow position: | chr23:23172028-23172557 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 67 |
Conread position: | 140-284 |
Cow position: | chr23:27647410-27647554 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 149-651 |
Cow position: | chr23:4639317-4638817 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 15 |
Conread position: | 183-552 |
Cow position: | chr23:4434957-4435337 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 76 |
Conread position: | 230-651 |
Cow position: | chr23:1957520-1957941 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 270 |
Conread position: | 231-651 |
Cow position: | chr23:28304272-28304696 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 31 |
Conread position: | 258-651 |
Cow position: | chr23:32351382-32350981 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 269-387 |
Cow position: | chr23:26159255-26159138 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 98 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 75 |
Conread position: | 280-651 |
Cow position: | chr23:15041167-15040788 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 248 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 16, 82 |
Conread position: | 306-651 |
Cow position: | chr23:608144-608493 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 193 |
Conread position: | 397-651 |
Cow position: | chr23:3707930-3708183 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 182 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 474-651 |
Cow position: | chr23:1340198-1340021 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.