Cow genome map
| Conread name: | Lym2-sn47_E05.f | 
| Conread position: | 11-651 | 
| Cow position: | chr3:56100622-56099978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 27 | 
| Conread position: | 14-651 | 
| Cow position: | chr3:37970108-37970755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 484 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 605 | 
| Conread position: | 16-191 | 
| Cow position: | chr3:40343190-40343368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 101, 145 | 
| Conread position: | 16-211 | 
| Cow position: | chr3:47177204-47177006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 16-229 | 
| Cow position: | chr3:7170267-7170484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 102, 186 | 
| Conread position: | 16-271 | 
| Cow position: | chr3:15181422-15181680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 103, 25 | 
| Conread position: | 16-272 | 
| Cow position: | chr3:57753864-57754123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 16-302 | 
| Cow position: | chr3:36118959-36119234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 280, 20 | 
| Conread position: | 16-354 | 
| Cow position: | chr3:70888204-70888539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 141 | 
| Conread position: | 16-392 | 
| Cow position: | chr3:19939957-19940335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 51 | 
| Conread position: | 16-452 | 
| Cow position: | chr3:48843318-48843767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 16-479 | 
| Cow position: | chr3:30331057-30330583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 16-498 | 
| Cow position: | chr3:63002475-63002005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 19 | 
| Conread position: | 16-527 | 
| Cow position: | chr3:27919491-27920013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 204 | 
| Conread position: | 16-552 | 
| Cow position: | chr3:67164354-67164889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 16-626 | 
| Cow position: | chr3:2368273-2367654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 418 | 
| Conread position: | 16-631 | 
| Cow position: | chr3:19720613-19719971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 237 | 
| Conread position: | 16-631 | 
| Cow position: | chr3:45033807-45034429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 32 | 
| Conread position: | 16-636 | 
| Cow position: | chr3:34029861-34029225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 224 | 
| Conread position: | 16-640 | 
| Cow position: | chr3:1742397-1743030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 221 | 
| Conread position: | 16-648 | 
| Cow position: | chr3:23289265-23288627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 10 | 
| Conread position: | 16-648 | 
| Cow position: | chr3:30617856-30617217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 380 | 
| Conread position: | 16-649 | 
| Cow position: | chr3:38494306-38494947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 216 | 
| Conread position: | 16-649 | 
| Cow position: | chr3:47087367-47087982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 179 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:595202-595836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 480 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 10 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:2918531-2919174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 426 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:3524088-3524721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 203 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:4287153-4287796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 381 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:6783432-6784075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 167 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:7157656-7157009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:7247608-7248242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 36 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:18812566-18813209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 10 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:19800108-19799469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 313 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:19879710-19880354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 102 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:19889546-19888951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 280, 91 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:20382092-20382745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 521 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:21181630-21180988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 316 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:29330225-29329580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 151 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:30315625-30316257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:32621975-32621332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 92 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:34506279-34505643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 211 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:36863394-36862748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:40339082-40338438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 477 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 32 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:46017110-46017751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 266 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:46503622-46504259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 168 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:46860226-46859584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 314 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:49136505-49135855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:53516668-53517319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 267 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:56295252-56295895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 146 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:64027071-64026428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 477 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 444 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:64651701-64652318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 311 | 
| Conread position: | 16-651 | 
| Cow position: | chr3:74058595-74059235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 279, 102 | 
| Conread position: | 18-381 | 
| Cow position: | chr3:35964052-35964410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 247 | 
| Conread position: | 18-540 | 
| Cow position: | chr3:47080344-47079811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 18-647 | 
| Cow position: | chr3:48058294-48057655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 8 | 
| Conread position: | 18-651 | 
| Cow position: | chr3:2869853-2870498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 18-651 | 
| Cow position: | chr3:40824459-40825102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 161 | 
| Conread position: | 18-651 | 
| Cow position: | chr3:41209536-41208903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 511 | 
| Conread position: | 19-346 | 
| Cow position: | chr3:33845615-33845292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 52, 142 | 
| Conread position: | 19-601 | 
| Cow position: | chr3:53412197-53412789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 99 | 
| Conread position: | 19-606 | 
| Cow position: | chr3:31416086-31416681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 265 | 
| Conread position: | 19-651 | 
| Cow position: | chr3:6877102-6876477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 47 | 
| Conread position: | 19-651 | 
| Cow position: | chr3:50916410-50917046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 203 | 
| Conread position: | 19-651 | 
| Cow position: | chr3:66889900-66889258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 324 | 
| Conread position: | 23-228 | 
| Cow position: | chr3:64356727-64356519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 23-560 | 
| Cow position: | chr3:2906700-2906138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 295 | 
| Conread position: | 23-651 | 
| Cow position: | chr3:6686882-6687503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 274, 84 | 
| Conread position: | 24-383 | 
| Cow position: | chr3:56339344-56338977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 138 | 
| Conread position: | 24-650 | 
| Cow position: | chr3:65208271-65208884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 171 | 
| Conread position: | 25-400 | 
| Cow position: | chr3:10240736-10241107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 151 | 
| Conread position: | 25-408 | 
| Cow position: | chr3:59862454-59862834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 152 | 
| Conread position: | 25-568 | 
| Cow position: | chr3:18354931-18354406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 123 | 
| Conread position: | 25-606 | 
| Cow position: | chr3:7478846-7478250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 143 | 
| Conread position: | 25-636 | 
| Cow position: | chr3:36877583-36876966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 375 | 
| Conread position: | 25-645 | 
| Cow position: | chr3:56146389-56147007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 271, 94 | 
| Conread position: | 25-651 | 
| Cow position: | chr3:2709794-2709160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 490 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 41 | 
| Conread position: | 25-651 | 
| Cow position: | chr3:29579701-29580331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 92 | 
| Conread position: | 25-651 | 
| Cow position: | chr3:57483654-57483016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 305 | 
| Conread position: | 25-651 | 
| Cow position: | chr3:66621256-66621905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 217 | 
| Conread position: | 26-400 | 
| Cow position: | chr3:38867392-38867771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 146 | 
| Conread position: | 26-538 | 
| Cow position: | chr3:18943108-18943613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 324, 91 | 
| Conread position: | 27-326 | 
| Cow position: | chr3:74226338-74226042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 91, 53 | 
| Conread position: | 27-467 | 
| Cow position: | chr3:3057880-3058339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 344 | 
| Conread position: | 27-603 | 
| Cow position: | chr3:77424700-77425253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 273, 35 | 
| Conread position: | 28-650 | 
| Cow position: | chr3:3840433-3839809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 192 | 
| Conread position: | 33-512 | 
| Cow position: | chr3:51939018-51938533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 69 | 
| Conread position: | 43-649 | 
| Cow position: | chr3:72671434-72670847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 106 | 
| Conread position: | 45-587 | 
| Cow position: | chr3:51364693-51364143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 286 | 
| Conread position: | 55-651 | 
| Cow position: | chr3:68698870-68698265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 479 | 
| Conread position: | 55-651 | 
| Cow position: | chr3:68872652-68872045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 57-636 | 
| Cow position: | chr3:67768937-67769500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 62 | 
| Conread position: | 67-359 | 
| Cow position: | chr3:24588342-24588053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 50 | 
| Conread position: | 86-594 | 
| Cow position: | chr3:58948674-58949181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 66 | 
| Conread position: | 86-651 | 
| Cow position: | chr3:44925195-44925773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 94-560 | 
| Cow position: | chr3:2854299-2853833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 125 | 
| Conread position: | 98-651 | 
| Cow position: | chr3:23206721-23206166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 199, 61 | 
| Conread position: | 103-651 | 
| Cow position: | chr3:29575967-29575414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 7 | 
| Conread position: | 115-651 | 
| Cow position: | chr3:63241071-63240534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 33 | 
| Conread position: | 123-636 | 
| Cow position: | chr3:56327287-56327801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 75 | 
| Conread position: | 140-387 | 
| Cow position: | chr3:2509849-2509600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 140 | 
| Conread position: | 200-651 | 
| Cow position: | chr3:32200271-32200725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 121 | 
| Conread position: | 226-651 | 
| Cow position: | chr3:27864454-27864881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 136 | 
| Conread position: | 229-651 | 
| Cow position: | chr3:16224165-16224595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 94 | 
| Conread position: | 232-651 | 
| Cow position: | chr3:68891287-68890867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 320 | 
| Conread position: | 266-651 | 
| Cow position: | chr3:69932510-69932124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 29 | 
| Conread position: | 277-651 | 
| Cow position: | chr3:54291251-54290872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 25, 55 | 
| Conread position: | 286-651 | 
| Cow position: | chr3:19945581-19945957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 359 | 
| Conread position: | 319-587 | 
| Cow position: | chr3:33634622-33634893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-34 | 
| Alignm gaps (pig, cow): | 31, 42 | 
| Conread position: | 351-651 | 
| Cow position: | chr3:51857287-51856981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 410-651 | 
| Cow position: | chr3:58784687-58784446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 474-651 | 
| Cow position: | chr3:13725251-13725075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 7, 0 | 
Show alignments to all cow chromosomes.
