Cow genome map


           Conread name:
           Lym2-sn47_E05.f
        

               Conread position:
               12-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               14-348
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 87
               

               Conread position:
               15-346
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 128
               

               Conread position:
               16-295
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               16-357
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 24
               

               Conread position:
               16-413
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 101
               

               Conread position:
               16-428
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 142
               

               Conread position:
               16-432
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 202
               

               Conread position:
               16-458
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               16-520
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 102
               

               Conread position:
               16-555
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 101
               

               Conread position:
               16-600
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               16-606
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 146
               

               Conread position:
               16-629
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 139
               

               Conread position:
               16-649
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               16-650
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 148
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 241
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 36
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 206
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 15
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 432
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 188
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 103
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 226
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 394
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 119
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 51
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 497
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 103
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 296
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 132
               

               Conread position:
               16-651
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               17-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 199
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 137
               

               Conread position:
               18-651
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 14
               

               Conread position:
               19-486
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 134
               

               Conread position:
               19-568
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 23
               

               Conread position:
               19-651
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 140
               

               Conread position:
               20-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               23-585
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 96
               

               Conread position:
               23-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 206
               

               Conread position:
               23-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               23-651
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 375
               

               Conread position:
               24-600
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 83
               

               Conread position:
               24-651
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               25-356
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               25-510
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 197
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 151
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 352
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 135
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 506
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 305
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 147
               

               Conread position:
               25-651
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 193
               

               Conread position:
               26-292
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               175, 89
               

               Conread position:
               26-538
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 127
               

               Conread position:
               26-647
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               26-649
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 16
               

               Conread position:
               26-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               34-651
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               40-651
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               48-381
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               51-651
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 365
               

               Conread position:
               52-361
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 106
               

               Conread position:
               54-357
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               56-291
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               192, 62
               

               Conread position:
               86-603
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               93-651
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 209
               

               Conread position:
               101-650
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               115-298
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               140-651
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 193
               

               Conread position:
               149-582
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 15
               

               Conread position:
               152-355
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               170-650
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 76
               

               Conread position:
               193-648
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               193-651
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 181
               

               Conread position:
               210-651
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               225-442
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               225-651
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               225-651
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               230-631
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               234-647
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               234-651
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 388
               

               Conread position:
               244-651
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               299-626
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               303-650
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               303-651
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               323-651
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 254
               

               Conread position:
               409-651
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               440-651
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               476-651
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               483-651
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               487-651
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               503-651
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               518-651
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.