Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym2-sn47_E05.f
        

               Conread position:
               13-649
               

               Cow position:
               chrX:17666841-17666210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 104
               

               Conread position:
               16-153
               

               Cow position:
               chrX:37849935-37850075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-197
               

               Cow position:
               chrX:48368098-48367914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-221
               

               Cow position:
               chrX:22618363-22618155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               16-231
               

               Cow position:
               chrX:29852622-29852399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-285
               

               Cow position:
               chrX:983610-983882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-287
               

               Cow position:
               chrX:7094348-7094622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-294
               

               Cow position:
               chrX:9126307-9126588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-308
               

               Cow position:
               chrX:5864340-5864636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-324
               

               Cow position:
               chrX:7482578-7482890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-381
               

               Cow position:
               chrX:12287457-12287087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 300
               

               Conread position:
               16-387
               

               Cow position:
               chrX:1834764-1835135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 70
               

               Conread position:
               16-387
               

               Cow position:
               chrX:5335539-5335158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               16-400
               

               Cow position:
               chrX:12354181-12354571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 380
               

               Conread position:
               16-425
               

               Cow position:
               chrX:30057996-30058412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               16-428
               

               Cow position:
               chrX:8962627-8962206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               16-458
               

               Cow position:
               chrX:44388709-44389157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 32
               

               Conread position:
               16-525
               

               Cow position:
               chrX:15486822-15486333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               16-527
               

               Cow position:
               chrX:23040177-23039660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 126
               

               Conread position:
               16-550
               

               Cow position:
               chrX:30138630-30138087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               16-552
               

               Cow position:
               chrX:41102520-41101983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 106
               

               Conread position:
               16-585
               

               Cow position:
               chrX:13397273-13396695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 365
               

               Conread position:
               16-636
               

               Cow position:
               chrX:20798267-20798876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 85
               

               Conread position:
               16-641
               

               Cow position:
               chrX:18451925-18452561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-647
               

               Cow position:
               chrX:26757668-26757042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 132
               

               Conread position:
               16-648
               

               Cow position:
               chrX:21830476-21831101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 145
               

               Conread position:
               16-648
               

               Cow position:
               chrX:23277971-23278610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               16-648
               

               Cow position:
               chrX:30365838-30365216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               16-649
               

               Cow position:
               chrX:2815535-2814895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 118
               

               Conread position:
               16-649
               

               Cow position:
               chrX:2858429-2857789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 118
               

               Conread position:
               16-649
               

               Cow position:
               chrX:11148389-11147745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 8
               

               Conread position:
               16-650
               

               Cow position:
               chrX:7752846-7753488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 386
               

               Conread position:
               16-651
               

               Cow position:
               chrX:674256-673617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 206
               

               Conread position:
               16-651
               

               Cow position:
               chrX:971727-972368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               16-651
               

               Cow position:
               chrX:3374962-3374319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 142
               

               Conread position:
               16-651
               

               Cow position:
               chrX:3467700-3467057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:5282834-5282195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 127
               

               Conread position:
               16-651
               

               Cow position:
               chrX:8589108-8589770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               665
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 206
               

               Conread position:
               16-651
               

               Cow position:
               chrX:9009285-9009926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 132
               

               Conread position:
               16-651
               

               Cow position:
               chrX:12343882-12344531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:12653577-12652915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               664
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               16-651
               

               Cow position:
               chrX:12702757-12702112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 208
               

               Conread position:
               16-651
               

               Cow position:
               chrX:13075750-13075113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 123
               

               Conread position:
               16-651
               

               Cow position:
               chrX:13096313-13095674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 123
               

               Conread position:
               16-651
               

               Cow position:
               chrX:14460470-14461095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 203
               

               Conread position:
               16-651
               

               Cow position:
               chrX:14784519-14783886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               16-651
               

               Cow position:
               chrX:15178490-15177846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 506
               

               Conread position:
               16-651
               

               Cow position:
               chrX:15623554-15622914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 265
               

               Conread position:
               16-651
               

               Cow position:
               chrX:15980012-15979369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 189
               

               Conread position:
               16-651
               

               Cow position:
               chrX:16276593-16277239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:17477478-17476830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               651
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 364
               

               Conread position:
               16-651
               

               Cow position:
               chrX:17609378-17608739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               400
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               16-651
               

               Cow position:
               chrX:18220369-18221008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 285
               

               Conread position:
               16-651
               

               Cow position:
               chrX:21643959-21643326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 381
               

               Conread position:
               16-651
               

               Cow position:
               chrX:22489090-22489746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:23389571-23388946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               16-651
               

               Cow position:
               chrX:23455071-23454429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 135
               

               Conread position:
               16-651
               

               Cow position:
               chrX:24324627-24323975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               656
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               16-651
               

               Cow position:
               chrX:27083913-27084563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 197
               

               Conread position:
               16-651
               

               Cow position:
               chrX:27425379-27424732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:27619187-27618546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 418
               

               Conread position:
               16-651
               

               Cow position:
               chrX:28521649-28521015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 132
               

               Conread position:
               16-651
               

               Cow position:
               chrX:28585926-28586571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 238
               

               Conread position:
               16-651
               

               Cow position:
               chrX:29885936-29886578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 318
               

               Conread position:
               16-651
               

               Cow position:
               chrX:29910483-29909835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 92
               

               Conread position:
               16-651
               

               Cow position:
               chrX:29935543-29936188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 379
               

               Conread position:
               16-651
               

               Cow position:
               chrX:30011945-30012589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 206
               

               Conread position:
               16-651
               

               Cow position:
               chrX:30201785-30201147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 155
               

               Conread position:
               16-651
               

               Cow position:
               chrX:32066221-32065579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 146
               

               Conread position:
               16-651
               

               Cow position:
               chrX:35530799-35531445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               16-651
               

               Cow position:
               chrX:39562987-39562362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 89
               

               Conread position:
               17-651
               

               Cow position:
               chrX:37813099-37813736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 117
               

               Conread position:
               18-272
               

               Cow position:
               chrX:8480599-8480862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               18-514
               

               Cow position:
               chrX:35940314-35939831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               18-553
               

               Cow position:
               chrX:24134311-24133793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 196
               

               Conread position:
               18-619
               

               Cow position:
               chrX:37015071-37015674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 90
               

               Conread position:
               18-651
               

               Cow position:
               chrX:2561911-2561266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 215
               

               Conread position:
               18-651
               

               Cow position:
               chrX:3084189-3083547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 405
               

               Conread position:
               18-651
               

               Cow position:
               chrX:11422819-11423461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 163
               

               Conread position:
               18-651
               

               Cow position:
               chrX:16362174-16361530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               18-651
               

               Cow position:
               chrX:29172813-29172177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 8
               

               Conread position:
               19-206
               

               Cow position:
               chrX:23132917-23133104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               97, 129
               

               Conread position:
               19-400
               

               Cow position:
               chrX:16463369-16462984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 276
               

               Conread position:
               19-562
               

               Cow position:
               chrX:12314802-12314264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 130
               

               Conread position:
               19-649
               

               Cow position:
               chrX:21341341-21341991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 208
               

               Conread position:
               19-651
               

               Cow position:
               chrX:2481682-2481043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               19-651
               

               Cow position:
               chrX:2577375-2578012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 129
               

               Conread position:
               19-651
               

               Cow position:
               chrX:5322778-5322138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 144
               

               Conread position:
               19-651
               

               Cow position:
               chrX:14595794-14596434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 613
               

               Conread position:
               19-651
               

               Cow position:
               chrX:17052492-17053141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               19-651
               

               Cow position:
               chrX:18658845-18658218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 99
               

               Conread position:
               19-651
               

               Cow position:
               chrX:27316225-27316868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               19-651
               

               Cow position:
               chrX:30170883-30170263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               20-651
               

               Cow position:
               chrX:38148547-38149181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 6
               

               Conread position:
               23-518
               

               Cow position:
               chrX:46235696-46236199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               23-647
               

               Cow position:
               chrX:29949645-29949025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 205
               

               Conread position:
               23-648
               

               Cow position:
               chrX:2535116-2534497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 129
               

               Conread position:
               23-649
               

               Cow position:
               chrX:18535406-18535987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 81
               

               Conread position:
               23-651
               

               Cow position:
               chrX:27961812-27962420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 39
               

               Conread position:
               23-651
               

               Cow position:
               chrX:36136599-36135984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 22
               

               Conread position:
               24-393
               

               Cow position:
               chrX:12461766-12462111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 136
               

               Conread position:
               24-435
               

               Cow position:
               chrX:29286388-29286804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 127
               

               Conread position:
               24-628
               

               Cow position:
               chrX:16811491-16810880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 124
               

               Conread position:
               24-646
               

               Cow position:
               chrX:28626673-28626059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               24-651
               

               Cow position:
               chrX:5296590-5295962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 116
               

               Conread position:
               24-651
               

               Cow position:
               chrX:12480948-12481586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               24-651
               

               Cow position:
               chrX:41850249-41849634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               25-272
               

               Cow position:
               chrX:13053980-13054217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               25-322
               

               Cow position:
               chrX:8610746-8610449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 123
               

               Conread position:
               25-558
               

               Cow position:
               chrX:29097151-29097693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 303
               

               Conread position:
               25-647
               

               Cow position:
               chrX:30068891-30068256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 89
               

               Conread position:
               25-648
               

               Cow position:
               chrX:13412178-13411543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 137
               

               Conread position:
               25-648
               

               Cow position:
               chrX:21580421-21581072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               652
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               25-649
               

               Cow position:
               chrX:28650598-28649978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 205
               

               Conread position:
               25-651
               

               Cow position:
               chrX:321421-322055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 92
               

               Conread position:
               25-651
               

               Cow position:
               chrX:5356868-5356234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 141
               

               Conread position:
               25-651
               

               Cow position:
               chrX:6281799-6281193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 94
               

               Conread position:
               25-651
               

               Cow position:
               chrX:12668795-12668157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 348
               

               Conread position:
               25-651
               

               Cow position:
               chrX:21491109-21491750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 211
               

               Conread position:
               25-651
               

               Cow position:
               chrX:27593031-27592400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 136
               

               Conread position:
               25-651
               

               Cow position:
               chrX:27986867-27986240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 94
               

               Conread position:
               26-636
               

               Cow position:
               chrX:1547935-1548555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               26-651
               

               Cow position:
               chrX:19875472-19876105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               26-651
               

               Cow position:
               chrX:30182983-30182338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 243
               

               Conread position:
               27-567
               

               Cow position:
               chrX:29793074-29792528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               27-631
               

               Cow position:
               chrX:15600117-15600715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               611
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 92
               

               Conread position:
               27-651
               

               Cow position:
               chrX:12183895-12184530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               27-651
               

               Cow position:
               chrX:18952725-18952087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               29-651
               

               Cow position:
               chrX:24771904-24771272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 297
               

               Conread position:
               34-651
               

               Cow position:
               chrX:20695857-20695233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 68
               

               Conread position:
               40-651
               

               Cow position:
               chrX:26399158-26398536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               48-650
               

               Cow position:
               chrX:505205-504622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               55-651
               

               Cow position:
               chrX:20035417-20034811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 437
               

               Conread position:
               55-651
               

               Cow position:
               chrX:21269053-21268472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               57-651
               

               Cow position:
               chrX:16780269-16780872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 230
               

               Conread position:
               63-651
               

               Cow position:
               chrX:13447834-13447236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 220
               

               Conread position:
               66-271
               

               Cow position:
               chrX:16685070-16684862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               66-651
               

               Cow position:
               chrX:16684841-16684246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 260
               

               Conread position:
               75-631
               

               Cow position:
               chrX:15041528-15040974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 146
               

               Conread position:
               86-651
               

               Cow position:
               chrX:23020325-23020885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 33
               

               Conread position:
               110-651
               

               Cow position:
               chrX:28506226-28505679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 9
               

               Conread position:
               110-651
               

               Cow position:
               chrX:28757602-28757054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 7
               

               Conread position:
               114-632
               

               Cow position:
               chrX:39694694-39695211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 15
               

               Conread position:
               125-631
               

               Cow position:
               chrX:22567198-22566686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 253
               

               Conread position:
               147-651
               

               Cow position:
               chrX:12667179-12667706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 149
               

               Conread position:
               158-606
               

               Cow position:
               chrX:13054925-13055365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 11
               

               Conread position:
               170-651
               

               Cow position:
               chrX:27495815-27496303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 192
               

               Conread position:
               173-568
               

               Cow position:
               chrX:26773189-26772814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               25, 158
               

               Conread position:
               174-651
               

               Cow position:
               chrX:16037326-16036857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               178-651
               

               Cow position:
               chrX:20333452-20332970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 216
               

               Conread position:
               181-649
               

               Cow position:
               chrX:2144078-2144557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 171
               

               Conread position:
               183-400
               

               Cow position:
               chrX:20018996-20019216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 210
               

               Conread position:
               199-387
               

               Cow position:
               chrX:23133320-23133512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               206-651
               

               Cow position:
               chrX:5393710-5393257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               207-651
               

               Cow position:
               chrX:22618064-22617615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               210-651
               

               Cow position:
               chrX:37957914-37957465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               214-648
               

               Cow position:
               chrX:32327310-32327745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 136
               

               Conread position:
               214-651
               

               Cow position:
               chrX:37850276-37850721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 194
               

               Conread position:
               244-651
               

               Cow position:
               chrX:11463872-11463457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               262-649
               

               Cow position:
               chrX:9093836-9094232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               263-651
               

               Cow position:
               chrX:30436038-30436434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               265-651
               

               Cow position:
               chrX:7094666-7095058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               270-626
               

               Cow position:
               chrX:6241230-6240869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               272-651
               

               Cow position:
               chrX:45419035-45418658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               273-651
               

               Cow position:
               chrX:20184448-20184827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               280-651
               

               Cow position:
               chrX:28664608-28664985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               283-568
               

               Cow position:
               chrX:2977878-2977585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               302-636
               

               Cow position:
               chrX:12836085-12835740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               303-650
               

               Cow position:
               chrX:29096091-29095737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               315-648
               

               Cow position:
               chrX:22127892-22127546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               317-651
               

               Cow position:
               chrX:43791907-43791572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               336-651
               

               Cow position:
               chrX:5367879-5367565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 226
               

               Conread position:
               373-651
               

               Cow position:
               chrX:1942058-1941776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               393-651
               

               Cow position:
               chrX:21791946-21792204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               447-651
               

               Cow position:
               chrX:21507782-21507578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               476-651
               

               Cow position:
               chrX:30168663-30168489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               95, 0
               
Show alignments to all cow chromosomes.
Conread position:	13-649
Cow position:	chrX:17666841-17666210 (view UCSC Genome Browser custom track)
Alignm length:	646
Alignm identity:	488
Alignm E-value:	0
Alignm gaps (pig, cow):	224, 104
Conread position:	16-153
Cow position:	chrX:37849935-37850075 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	105
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	100, 0
Conread position:	16-197
Cow position:	chrX:48368098-48367914 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	137
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	100, 0
Conread position:	16-221
Cow position:	chrX:22618363-22618155 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	158
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	103, 0
Conread position:	16-231
Cow position:	chrX:29852622-29852399 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	168
Alignm E-value:	6e-38
Alignm gaps (pig, cow):	100, 0
Conread position:	16-285
Cow position:	chrX:983610-983882 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 0
Conread position:	16-287
Cow position:	chrX:7094348-7094622 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	200
Alignm E-value:	0
Alignm gaps (pig, cow):	100, 0
Conread position:	16-294
Cow position:	chrX:9126307-9126588 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	163
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	100, 0
Conread position:	16-308
Cow position:	chrX:5864340-5864636 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	219
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 0
Conread position:	16-324
Cow position:	chrX:7482578-7482890 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	232
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 0
Conread position:	16-381
Cow position:	chrX:12287457-12287087 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	270
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 300
Conread position:	16-387
Cow position:	chrX:1834764-1835135 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	281
Alignm E-value:	0
Alignm gaps (pig, cow):	216, 70
Conread position:	16-400
Cow position:	chrX:12354181-12354571 (view UCSC Genome Browser custom track)
Alignm length:	392
Alignm identity:	286
Alignm E-value:	0
Alignm gaps (pig, cow):	102, 380
Conread position:	16-425
Cow position:	chrX:30057996-30058412 (view UCSC Genome Browser custom track)
Alignm length:	422
Alignm identity:	309
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 67
Conread position:	16-428
Cow position:	chrX:8962627-8962206 (view UCSC Genome Browser custom track)
Alignm length:	424
Alignm identity:	307
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 105
Conread position:	16-458
Cow position:	chrX:44388709-44389157 (view UCSC Genome Browser custom track)
Alignm length:	453
Alignm identity:	336
Alignm E-value:	0
Alignm gaps (pig, cow):	274, 32
Conread position:	16-525
Cow position:	chrX:15486822-15486333 (view UCSC Genome Browser custom track)
Alignm length:	519
Alignm identity:	382
Alignm E-value:	0
Alignm gaps (pig, cow):	94, 44
Conread position:	16-527
Cow position:	chrX:23040177-23039660 (view UCSC Genome Browser custom track)
Alignm length:	525
Alignm identity:	390
Alignm E-value:	0
Alignm gaps (pig, cow):	103, 126
Conread position:	16-550
Cow position:	chrX:30138630-30138087 (view UCSC Genome Browser custom track)
Alignm length:	549
Alignm identity:	413
Alignm E-value:	0
Alignm gaps (pig, cow):	100, 32
Conread position:	16-552
Cow position:	chrX:41102520-41101983 (view UCSC Genome Browser custom track)
Alignm length:	551
Alignm identity:	366
Alignm E-value:	0
Alignm gaps (pig, cow):	208, 106