Cow genome map


           Conread name:
           Lym2-sn54_D03.f
        

               Conread position:
               480-686
               

               Cow position:
               chr21:41569525-41569327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               202, 18
               

               Conread position:
               482-686
               

               Cow position:
               chr21:41532295-41532497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               198, 20
               

               Conread position:
               485-653
               

               Cow position:
               chr21:43626833-43626663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               488-675
               

               Cow position:
               chr21:41688066-41687883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               520-682
               

               Cow position:
               chr21:7074264-7074103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               520-686
               

               Cow position:
               chr21:7143705-7143537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               121, 97
               

               Conread position:
               523-681
               

               Cow position:
               chr21:8851020-8851181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               527-682
               

               Cow position:
               chr21:24735466-24735311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               533-682
               

               Cow position:
               chr21:12898564-12898709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               548-681
               

               Cow position:
               chr21:42475305-42475171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.