Cow genome map

Conread name: Lym2-sn63_D07.f

Conread position: 75-669
Cow position: chr12:15720409-15719824 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 521, 11

Conread position: 92-669
Cow position: chr12:3364056-3364633 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 233

Conread position: 105-396
Cow position: chr12:19971932-19972213 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 195

Conread position: 106-260
Cow position: chr12:1438093-1438246 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 106-367
Cow position: chr12:21888859-21888599 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-386
Cow position: chr12:62024-61745 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-404
Cow position: chr12:8136807-8136512 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 189, 125

Conread position: 106-466
Cow position: chr12:35547945-35547593 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 106-506
Cow position: chr12:10164777-10164376 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 91

Conread position: 106-523
Cow position: chr12:27958342-27957926 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-540
Cow position: chr12:21452794-21452361 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-562
Cow position: chr12:7674085-7674540 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-592
Cow position: chr12:12295743-12296226 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 315
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 104

Conread position: 106-669
Cow position: chr12:8839437-8840000 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr12:14423533-14424103 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 209

Conread position: 106-669
Cow position: chr12:17718484-17719042 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 185

Conread position: 106-669
Cow position: chr12:22748398-22748958 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 210

Conread position: 106-669
Cow position: chr12:35162947-35163529 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 223

Conread position: 106-669
Cow position: chr12:39930352-39930911 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 122

Conread position: 108-666
Cow position: chr12:22202496-22201938 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 207

Conread position: 108-669
Cow position: chr12:5226421-5226975 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 8

Conread position: 108-669
Cow position: chr12:28763828-28763270 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 148

Conread position: 108-669
Cow position: chr12:35367586-35368123 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 127

Conread position: 109-232
Cow position: chr12:45145239-45145362 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-275
Cow position: chr12:42232496-42232662 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 109-275
Cow position: chr12:43602070-43601904 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 109-306
Cow position: chr12:18936015-18936212 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 109-331
Cow position: chr12:21089753-21089532 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 206, 0

Conread position: 109-346
Cow position: chr12:42856345-42856109 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 183

Conread position: 109-359
Cow position: chr12:32340070-32339822 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 0

Conread position: 109-367
Cow position: chr12:36213464-36213721 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 206, 0

Conread position: 109-372
Cow position: chr12:31829263-31829001 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-386
Cow position: chr12:33925511-33925235 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-393
Cow position: chr12:1476475-1476194 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 158, 0

Conread position: 109-403
Cow position: chr12:8773853-8774143 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 109-404
Cow position: chr12:27929605-27929313 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 274, 206

Conread position: 109-415
Cow position: chr12:30686928-30687233 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-416
Cow position: chr12:19871398-19871706 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 109

Conread position: 109-447
Cow position: chr12:258916-259253 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-466
Cow position: chr12:5107244-5107600 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-466
Cow position: chr12:25097079-25096726 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-466
Cow position: chr12:32656735-32657088 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-501
Cow position: chr12:15760225-15760602 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 208

Conread position: 109-505
Cow position: chr12:6106162-6105788 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 109-506
Cow position: chr12:20459533-20459140 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 109-506
Cow position: chr12:26870070-26869670 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 128

Conread position: 109-524
Cow position: chr12:16302152-16301738 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-536
Cow position: chr12:24447682-24447252 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 39

Conread position: 109-553
Cow position: chr12:27994287-27994728 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-560
Cow position: chr12:12754970-12754530 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 109-562
Cow position: chr12:2228757-2229209 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-582
Cow position: chr12:2285462-2285909 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 39

Conread position: 109-592
Cow position: chr12:1093088-1093568 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 109-599
Cow position: chr12:20994578-20994081 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 57

Conread position: 109-650
Cow position: chr12:30501827-30502344 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 73

Conread position: 109-652
Cow position: chr12:33282949-33282406 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 172

Conread position: 109-662
Cow position: chr12:21718991-21718439 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 121

Conread position: 109-662
Cow position: chr12:27435970-27435426 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-665
Cow position: chr12:1405635-1406189 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 142

Conread position: 109-666
Cow position: chr12:250132-249577 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-666
Cow position: chr12:3180595-3181152 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-666
Cow position: chr12:5110874-5110326 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 39

Conread position: 109-666
Cow position: chr12:10931271-10931826 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 206

Conread position: 109-666
Cow position: chr12:11101434-11101991 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr12:24029292-24028740 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-666
Cow position: chr12:25148431-25147875 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 13

Conread position: 109-667
Cow position: chr12:22480311-22480861 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-668
Cow position: chr12:22593951-22594492 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 103

Conread position: 109-668
Cow position: chr12:32011591-32011032 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:1007202-1007762 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 108

Conread position: 109-669
Cow position: chr12:1408004-1408578 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 274

Conread position: 109-669
Cow position: chr12:1511577-1511019 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 147

Conread position: 109-669
Cow position: chr12:3717087-3716530 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:9988500-9987954 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 135

Conread position: 109-669
Cow position: chr12:10075848-10076404 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr12:10358882-10359440 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 206

Conread position: 109-669
Cow position: chr12:12928720-12928163 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr12:13043055-13042494 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-669
Cow position: chr12:14568628-14568078 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 119

Conread position: 109-669
Cow position: chr12:15925565-15925007 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr12:21075022-21075562 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 134

Conread position: 109-669
Cow position: chr12:21211970-21212529 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 197

Conread position: 109-669
Cow position: chr12:21251127-21250569 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 19

Conread position: 109-669
Cow position: chr12:21432527-21433088 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 168

Conread position: 109-669
Cow position: chr12:21610790-21611348 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 19

Conread position: 109-669
Cow position: chr12:21665322-21665884 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr12:22517666-22517104 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 107

Conread position: 109-669
Cow position: chr12:22979705-22979147 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 45

Conread position: 109-669
Cow position: chr12:23138142-23137582 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:24557766-24558326 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 36

Conread position: 109-669
Cow position: chr12:24980907-24981453 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 40

Conread position: 109-669
Cow position: chr12:25266147-25265590 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 109-669
Cow position: chr12:25313527-25312968 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 206

Conread position: 109-669
Cow position: chr12:27506463-27505904 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:28013045-28012485 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:31027633-31027074 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 42

Conread position: 109-669
Cow position: chr12:31217372-31217928 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 380
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 76

Conread position: 109-669
Cow position: chr12:32147443-32146884 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:32757883-32758440 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:34176741-34177301 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 210

Conread position: 109-669
Cow position: chr12:36287826-36287265 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 45

Conread position: 109-669
Cow position: chr12:36445573-36446131 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 169

Conread position: 109-669
Cow position: chr12:37562193-37562746 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr12:38893550-38894109 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr12:41338046-41337483 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 206

Conread position: 109-669
Cow position: chr12:43681191-43681750 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr12:46111931-46111371 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 110-232
Cow position: chr12:19040801-19040924 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 110-280
Cow position: chr12:23520975-23520814 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 110-405
Cow position: chr12:19852447-19852734 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 21

Conread position: 110-475
Cow position: chr12:24205722-24206081 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 56

Conread position: 110-506
Cow position: chr12:18585860-18586254 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 110-639
Cow position: chr12:12178049-12177522 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 49

Conread position: 110-669
Cow position: chr12:758608-759143 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 110-669
Cow position: chr12:3070044-3070606 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 110-669
Cow position: chr12:33296820-33297368 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 106

Conread position: 112-668
Cow position: chr12:32848755-32849313 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 48

Conread position: 113-275
Cow position: chr12:8674875-8674714 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 113-669
Cow position: chr12:1056317-1055763 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 83

Conread position: 117-332
Cow position: chr12:1108317-1108519 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 117-375
Cow position: chr12:2242793-2242537 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 217, 193

Conread position: 117-488
Cow position: chr12:28571578-28571936 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 99

Conread position: 117-586
Cow position: chr12:15939667-15939219 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 117-668
Cow position: chr12:15820926-15821466 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 37

Conread position: 119-357
Cow position: chr12:23294431-23294666 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 0

Conread position: 119-414
Cow position: chr12:31261213-31260920 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 119-660
Cow position: chr12:19155663-19155119 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 119-669
Cow position: chr12:5713160-5713709 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 199

Conread position: 119-669
Cow position: chr12:6550796-6551332 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 339
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 31

Conread position: 119-669
Cow position: chr12:8172106-8172651 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 13

Conread position: 119-669
Cow position: chr12:17663159-17663700 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 26

Conread position: 119-669
Cow position: chr12:19868410-19868960 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 142

Conread position: 119-669
Cow position: chr12:21314233-21313670 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 121-411
Cow position: chr12:23159303-23159027 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 235, 7

Conread position: 121-669
Cow position: chr12:41973574-41973029 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 194

Conread position: 125-668
Cow position: chr12:21904561-21905114 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 170

Conread position: 128-496
Cow position: chr12:36569139-36568754 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 121

Conread position: 128-666
Cow position: chr12:42604977-42604441 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 91

Conread position: 129-669
Cow position: chr12:21497687-21497174 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 28

Conread position: 129-669
Cow position: chr12:29427765-29427235 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 341
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 103

Conread position: 131-669
Cow position: chr12:8841850-8841294 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 191

Conread position: 134-300
Cow position: chr12:21672564-21672730 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 134-332
Cow position: chr12:39283306-39283108 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 115, 186

Conread position: 134-493
Cow position: chr12:32483597-32483263 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 134-665
Cow position: chr12:1774711-1774165 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 49

Conread position: 134-669
Cow position: chr12:30141630-30142157 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 135-370
Cow position: chr12:21484623-21484848 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 153, 54

Conread position: 135-669
Cow position: chr12:22686709-22687228 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 75

Conread position: 136-666
Cow position: chr12:23474966-23475490 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 136-669
Cow position: chr12:14214274-14214807 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 179

Conread position: 137-669
Cow position: chr12:29447021-29447554 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 75

Conread position: 138-668
Cow position: chr12:21561951-21562481 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 81

Conread position: 140-669
Cow position: chr12:6186929-6186407 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 76

Conread position: 140-669
Cow position: chr12:25838501-25839030 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 5

Conread position: 144-305
Cow position: chr12:41595442-41595604 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 149-406
Cow position: chr12:3094397-3094141 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 171

Conread position: 155-510
Cow position: chr12:10988589-10988940 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 37

Conread position: 157-669
Cow position: chr12:21946231-21946727 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 59

Conread position: 160-669
Cow position: chr12:23441702-23441188 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 155

Conread position: 170-669
Cow position: chr12:30016823-30016332 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 136

Conread position: 184-526
Cow position: chr12:21130294-21130628 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 7

Conread position: 187-669
Cow position: chr12:17787377-17786895 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 128

Conread position: 189-669
Cow position: chr12:10790980-10790500 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 126

Conread position: 198-661
Cow position: chr12:23099771-23099295 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 118

Conread position: 200-396
Cow position: chr12:45540671-45540866 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 201-383
Cow position: chr12:10490128-10490307 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 202-615
Cow position: chr12:1855579-1855169 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 24

Conread position: 211-669
Cow position: chr12:22566607-22567058 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 81

Conread position: 219-669
Cow position: chr12:32900856-32900406 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 96

Conread position: 219-669
Cow position: chr12:41965819-41965365 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 96

Conread position: 220-437
Cow position: chr12:25143429-25143214 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 181, 22

Conread position: 221-586
Cow position: chr12:6954614-6954974 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 221-636
Cow position: chr12:29485362-29484957 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 94

Conread position: 230-396
Cow position: chr12:9894615-9894452 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 237-651
Cow position: chr12:22286620-22286207 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 40

Conread position: 237-669
Cow position: chr12:5904846-5905270 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 80

Conread position: 237-669
Cow position: chr12:32917644-32918073 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 78

Conread position: 238-647
Cow position: chr12:1487781-1487376 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 240-669
Cow position: chr12:14940282-14940711 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 76

Conread position: 241-669
Cow position: chr12:30593788-30593364 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 74

Conread position: 243-669
Cow position: chr12:44766152-44766575 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 13

Conread position: 244-494
Cow position: chr12:21202149-21202400 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 77

Conread position: 244-669
Cow position: chr12:26268895-26268470 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 71

Conread position: 244-669
Cow position: chr12:35248927-35248516 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 382, 19

Conread position: 245-666
Cow position: chr12:27852328-27851911 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 70

Conread position: 245-668
Cow position: chr12:39136134-39135721 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 116

Conread position: 245-669
Cow position: chr12:9397226-9396807 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 327, 15

Conread position: 246-669
Cow position: chr12:5274041-5273625 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 69

Conread position: 247-647
Cow position: chr12:18309771-18309378 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 160, 9

Conread position: 249-669
Cow position: chr12:40867659-40868079 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 66

Conread position: 250-528
Cow position: chr12:4004574-4004301 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 7

Conread position: 250-660
Cow position: chr12:35345323-35344942 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 251-489
Cow position: chr12:36149345-36149108 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 251-669
Cow position: chr12:39611076-39610660 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 6

Conread position: 253-629
Cow position: chr12:38774422-38774783 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 257-668
Cow position: chr12:23491176-23490748 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 130, 58

Conread position: 257-669
Cow position: chr12:21659165-21659593 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 58

Conread position: 268-619
Cow position: chr12:20217840-20218192 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 47

Conread position: 269-528
Cow position: chr12:47928445-47928696 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 129, 50

Conread position: 269-669
Cow position: chr12:6404441-6404041 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 46

Conread position: 269-669
Cow position: chr12:39416160-39416549 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 191, 46

Conread position: 270-669
Cow position: chr12:19040508-19040123 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 45

Conread position: 272-535
Cow position: chr12:28754797-28755055 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 274-669
Cow position: chr12:5145911-5146313 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 45

Conread position: 281-669
Cow position: chr12:4544883-4544510 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 103

Conread position: 281-669
Cow position: chr12:7651476-7651094 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 38

Conread position: 282-491
Cow position: chr12:6686294-6686503 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 42

Conread position: 284-609
Cow position: chr12:22214325-22214009 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 286, 28

Conread position: 292-668
Cow position: chr12:40306644-40307015 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 13

Conread position: 296-666
Cow position: chr12:28708250-28707882 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 23

Conread position: 305-667
Cow position: chr12:564654-565003 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 103, 14

Conread position: 315-506
Cow position: chr12:1058163-1057978 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 316-667
Cow position: chr12:11558757-11558400 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 142

Show alignments to all cow chromosomes.