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Cow genome map

           
Conread name:
           
Lym2-sn63_D07.f
        

               
Conread position:
               
74-520
               

               
Cow position:
               
chr13:60466071-60465626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
74-669
               

               
Cow position:
               
chr13:680994-681589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
74-669
               

               
Cow position:
               
chr13:22084713-22085306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
74-669
               

               
Cow position:
               
chr13:26173403-26172810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 69
               

               
Conread position:
               
95-427
               

               
Cow position:
               
chr13:19424609-19424938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
106-271
               

               
Cow position:
               
chr13:47301600-47301765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-457
               

               
Cow position:
               
chr13:19843445-19843789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
188, 213
               

               
Conread position:
               
106-567
               

               
Cow position:
               
chr13:17485566-17486037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
106-668
               

               
Cow position:
               
chr13:12618098-12618638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 26
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr13:2725832-2725269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr13:46459644-46459108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr13:49976645-49977208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr13:53051811-53052374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
108-668
               

               
Cow position:
               
chr13:11822962-11822413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
109-232
               

               
Cow position:
               
chr13:8068224-8068101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-247
               

               
Cow position:
               
chr13:14411193-14411055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-247
               

               
Cow position:
               
chr13:28526332-28526195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
109-263
               

               
Cow position:
               
chr13:19812036-19811882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-263
               

               
Cow position:
               
chr13:32253373-32253219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-275
               

               
Cow position:
               
chr13:30243305-30243471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr13:19566699-19566883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr13:504312-504520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr13:45933729-45933937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr13:17318398-17318178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr13:18097644-18097409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-362
               

               
Cow position:
               
chr13:22714879-22715119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr13:7609123-7609379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
109-370
               

               
Cow position:
               
chr13:32955483-32955226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
109-370
               

               
Cow position:
               
chr13:32982424-32982167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
109-375
               

               
Cow position:
               
chr13:58740553-58740812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
109-399
               

               
Cow position:
               
chr13:52860257-52859978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr13:5331316-5331612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-414
               

               
Cow position:
               
chr13:20538566-20538261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr13:2138200-2137890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr13:54238465-54238161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 105
               

               
Conread position:
               
109-452
               

               
Cow position:
               
chr13:46488903-46488575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
189, 45
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr13:8781886-8782232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
109-472
               

               
Cow position:
               
chr13:6719186-6718824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-475
               

               
Cow position:
               
chr13:60426005-60426377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 209
               

               
Conread position:
               
109-506
               

               
Cow position:
               
chr13:31510122-31510515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
109-506
               

               
Cow position:
               
chr13:39944485-39944861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
109-522
               

               
Cow position:
               
chr13:9301148-9301547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 36
               

               
Conread position:
               
109-536
               

               
Cow position:
               
chr13:16248964-16248541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 207
               

               
Conread position:
               
109-541
               

               
Cow position:
               
chr13:28699798-28700227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-544
               

               
Cow position:
               
chr13:13332976-13332535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 207
               

               
Conread position:
               
109-557
               

               
Cow position:
               
chr13:838429-837982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-560
               

               
Cow position:
               
chr13:35760520-35760968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-561
               

               
Cow position:
               
chr13:3657372-3656925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-562
               

               
Cow position:
               
chr13:46055920-46056372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr13:38897292-38897751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr13:50079590-50079115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 205
               

               
Conread position:
               
109-631
               

               
Cow position:
               
chr13:41337691-41337184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
109-643
               

               
Cow position:
               
chr13:48945959-48945414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
109-654
               

               
Cow position:
               
chr13:4944368-4944910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 298
               

               
Conread position:
               
109-654
               

               
Cow position:
               
chr13:32152805-32152270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 51
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr13:11390236-11390792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 206
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr13:34298558-34299122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:1591178-1590619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 213
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:3314605-3315155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:6665150-6664593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:13902834-13903390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:18330147-18329590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:20778487-20777933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 61
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:31608463-31607904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:32922332-32921778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 39
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:34345282-34345837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 34
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr13:38612202-38612745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 61
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr13:19102695-19102140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr13:34905595-34905057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr13:42087150-42086596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 45
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr13:49805964-49805421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 183
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:561408-560850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 88
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:644915-645462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 18
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:3021507-3020947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:3556390-3556949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 142
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:5498824-5498267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 207
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:9048573-9049137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:11254669-11254118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:11795719-11795164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 117
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:13126737-13126192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 205
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:14303008-14302449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:14400099-14399537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 208
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:15280265-15280826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:15921479-15920923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 74
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:16807575-16808120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 60
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:18121892-18121336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 168
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:20571731-20571179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 171
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:21837319-21836765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:22774281-22774848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 171
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:24931840-24931283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 45
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:25882208-25882767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:26204481-26203921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:28131045-28130488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:28131484-28132041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:29055450-29054890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:31989852-31990406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 42
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:32080854-32081414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:32734209-32733653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:32794363-32793804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 36
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:33161919-33162500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:33522980-33522418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:33907776-33907202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 18
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:34190225-34190765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:35540384-35540939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 18
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:36936709-36937257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:39911383-39911934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 186
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:43974973-43974420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 107
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:50112444-50113004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 171
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:50190093-50189536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 110
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:51298510-51297950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:53157411-53156851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 168
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:55337721-55338273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 101
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:56692248-56692809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:58313310-58313870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr13:60646608-60646047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 206
               

               
Conread position:
               
110-341
               

               
Cow position:
               
chr13:31730592-31730362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr13:26381698-26381948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
207, 25
               

               
Conread position:
               
110-506
               

               
Cow position:
               
chr13:42088489-42088110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 44
               

               
Conread position:
               
110-528
               

               
Cow position:
               
chr13:5229986-5229578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 44
               

               
Conread position:
               
110-667
               

               
Cow position:
               
chr13:21764319-21764874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 28
               

               
Conread position:
               
110-669
               

               
Cow position:
               
chr13:20564002-20563444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 106
               

               
Conread position:
               
111-667
               

               
Cow position:
               
chr13:51184290-51184840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
112-584
               

               
Cow position:
               
chr13:11826772-11826332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
113-246
               

               
Cow position:
               
chr13:29721503-29721636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-662
               

               
Cow position:
               
chr13:61954224-61954770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
113-666
               

               
Cow position:
               
chr13:30469136-30468583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 202
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr13:32774369-32773817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
114-559
               

               
Cow position:
               
chr13:1461549-1461095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 102
               

               
Conread position:
               
114-669
               

               
Cow position:
               
chr13:34870943-34871494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 201
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr13:34376543-34376240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 197
               

               
Conread position:
               
117-629
               

               
Cow position:
               
chr13:13312577-13313089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
117-662
               

               
Cow position:
               
chr13:45002725-45002180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
119-370
               

               
Cow position:
               
chr13:17277147-17277389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
119-370
               

               
Cow position:
               
chr13:58718544-58718783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
211, 127
               

               
Conread position:
               
119-396
               

               
Cow position:
               
chr13:19394134-19393860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
119-402
               

               
Cow position:
               
chr13:22275768-22276055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
119-409
               

               
Cow position:
               
chr13:15256870-15257166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 206
               

               
Conread position:
               
119-409
               

               
Cow position:
               
chr13:52085309-52085026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
119-493
               

               
Cow position:
               
chr13:2805294-2804921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 93
               

               
Conread position:
               
119-668
               

               
Cow position:
               
chr13:4663611-4664144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
119-668
               

               
Cow position:
               
chr13:18945546-18944981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:5622709-5622212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:9537229-9537773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 196
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:20562103-20561550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 26
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:21905930-21905374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 202
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:23266841-23266296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:38013666-38013131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr13:44323973-44323431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 90
               

               
Conread position:
               
120-665
               

               
Cow position:
               
chr13:22780997-22780446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 55
               

               
Conread position:
               
120-669
               

               
Cow position:
               
chr13:31579832-31580362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 34
               

               
Conread position:
               
120-669
               

               
Cow position:
               
chr13:48627540-48628073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 175
               

               
Conread position:
               
121-368
               

               
Cow position:
               
chr13:30652294-30652049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
121-669
               

               
Cow position:
               
chr13:6342872-6343420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 194
               

               
Conread position:
               
122-431
               

               
Cow position:
               
chr13:15525777-15525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
123-668
               

               
Cow position:
               
chr13:5717698-5717158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 212
               

               
Conread position:
               
128-331
               

               
Cow position:
               
chr13:32016770-32016966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
128-349
               

               
Cow position:
               
chr13:3001354-3001134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
128-506
               

               
Cow position:
               
chr13:30241562-30241938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 187
               

               
Conread position:
               
128-666
               

               
Cow position:
               
chr13:28414292-28413756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 187
               

               
Conread position:
               
128-669
               

               
Cow position:
               
chr13:7870565-7870027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
468, 187
               

               
Conread position:
               
129-612
               

               
Cow position:
               
chr13:34051620-34052107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 148
               

               
Conread position:
               
129-660
               

               
Cow position:
               
chr13:34508827-34508303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
129-662
               

               
Cow position:
               
chr13:55405707-55406221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 9
               

               
Conread position:
               
129-669
               

               
Cow position:
               
chr13:21134730-21135270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 145
               

               
Conread position:
               
129-669
               

               
Cow position:
               
chr13:22907269-22906743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 184
               

               
Conread position:
               
131-555
               

               
Cow position:
               
chr13:3784129-3784554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
131-669
               

               
Cow position:
               
chr13:11571673-11571142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
135-669
               

               
Cow position:
               
chr13:9571009-9570470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 144
               

               
Conread position:
               
137-399
               

               
Cow position:
               
chr13:34928162-34928420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
137-669
               

               
Cow position:
               
chr13:43891826-43892359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 179
               

               
Conread position:
               
139-669
               

               
Cow position:
               
chr13:17252945-17252435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
140-398
               

               
Cow position:
               
chr13:60446276-60446520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
218, 14
               

               
Conread position:
               
140-669
               

               
Cow position:
               
chr13:47357583-47357067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 20
               

               
Conread position:
               
141-451
               

               
Cow position:
               
chr13:47189027-47189330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr13:28449679-28449310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
148-654
               

               
Cow position:
               
chr13:26823114-26822623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 168
               

               
Conread position:
               
149-669
               

               
Cow position:
               
chr13:46737155-46736650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 56
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr13:34113227-34112902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
322, 74
               

               
Conread position:
               
157-558
               

               
Cow position:
               
chr13:28171993-28171599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
170-669
               

               
Cow position:
               
chr13:43593875-43594368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 11
               

               
Conread position:
               
173-506
               

               
Cow position:
               
chr13:49194991-49195322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
179-669
               

               
Cow position:
               
chr13:60967730-60967248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 136
               

               
Conread position:
               
180-669
               

               
Cow position:
               
chr13:3015223-3015714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
181-546
               

               
Cow position:
               
chr13:46462681-46463029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
183-668
               

               
Cow position:
               
chr13:54864000-54864473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
185-551
               

               
Cow position:
               
chr13:12572389-12572025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
191-668
               

               
Cow position:
               
chr13:3144146-3143679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 73
               

               
Conread position:
               
195-456
               

               
Cow position:
               
chr13:17456164-17456424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
210, 124
               

               
Conread position:
               
195-468
               

               
Cow position:
               
chr13:47313634-47313359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr13:34038492-34038019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 34
               

               
Conread position:
               
198-568
               

               
Cow position:
               
chr13:24703332-24702966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
200-669
               

               
Cow position:
               
chr13:10733046-10733499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
200-669
               

               
Cow position:
               
chr13:30505369-30504909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
201-662
               

               
Cow position:
               
chr13:16244158-16243699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
201-669
               

               
Cow position:
               
chr13:47023630-47023161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
202-669
               

               
Cow position:
               
chr13:3651214-3650768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 9
               

               
Conread position:
               
205-388
               

               
Cow position:
               
chr13:46524269-46524459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
207-535
               

               
Cow position:
               
chr13:19397205-19396887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
256, 24
               

               
Conread position:
               
210-531
               

               
Cow position:
               
chr13:18398311-18397984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
210-643
               

               
Cow position:
               
chr13:2951599-2951176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
179, 105
               

               
Conread position:
               
211-466
               

               
Cow position:
               
chr13:14182867-14182617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
204, 97
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr13:43628375-43628664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
285, 104
               

               
Conread position:
               
211-520
               

               
Cow position:
               
chr13:3786464-3786772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
211-669
               

               
Cow position:
               
chr13:24059407-24059878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 104
               

               
Conread position:
               
212-669
               

               
Cow position:
               
chr13:2799965-2800422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr13:24630252-24630031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
216-630
               

               
Cow position:
               
chr13:9416543-9416954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
218-479
               

               
Cow position:
               
chr13:26167476-26167734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
219-594
               

               
Cow position:
               
chr13:55574169-55573797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr13:6869396-6869841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 72
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr13:20242860-20243286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
220-500
               

               
Cow position:
               
chr13:33693153-33693441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
220-506
               

               
Cow position:
               
chr13:15458792-15459064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
220-594
               

               
Cow position:
               
chr13:50680615-50680981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr13:47570167-47570439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
223-668
               

               
Cow position:
               
chr13:41807648-41807207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
223-669
               

               
Cow position:
               
chr13:14590421-14589975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 92
               

               
Conread position:
               
223-669
               

               
Cow position:
               
chr13:60219186-60219626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
226-668
               

               
Cow position:
               
chr13:47006848-47007291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 90
               

               
Conread position:
               
231-585
               

               
Cow position:
               
chr13:33500603-33500257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 12
               

               
Conread position:
               
237-653
               

               
Cow position:
               
chr13:40300641-40300225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 78
               

               
Conread position:
               
238-667
               

               
Cow position:
               
chr13:62479647-62480078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
239-669
               

               
Cow position:
               
chr13:60695701-60695285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
241-652
               

               
Cow position:
               
chr13:51332188-51332597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 74
               

               
Conread position:
               
243-545
               

               
Cow position:
               
chr13:46104713-46105023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
245-457
               

               
Cow position:
               
chr13:37544258-37544459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
161, 10
               

               
Conread position:
               
245-669
               

               
Cow position:
               
chr13:51481724-51481300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
246-669
               

               
Cow position:
               
chr13:34386025-34385594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
249-385
               

               
Cow position:
               
chr13:54313458-54313591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
251-669
               

               
Cow position:
               
chr13:15538866-15538448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 64
               

               
Conread position:
               
251-669
               

               
Cow position:
               
chr13:46466107-46465680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
253-481
               

               
Cow position:
               
chr13:19322372-19322147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
253-669
               

               
Cow position:
               
chr13:57027349-57027764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
254-668
               

               
Cow position:
               
chr13:6055241-6054832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 41
               

               
Conread position:
               
254-669
               

               
Cow position:
               
chr13:29658709-29658288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
259-668
               

               
Cow position:
               
chr13:26073786-26073386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
260-669
               

               
Cow position:
               
chr13:6615880-6616295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
261-667
               

               
Cow position:
               
chr13:7365584-7365990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
261-669
               

               
Cow position:
               
chr13:30794650-30794267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
268-660
               

               
Cow position:
               
chr13:55957006-55957404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
268-668
               

               
Cow position:
               
chr13:5542698-5542310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
269-668
               

               
Cow position:
               
chr13:3163354-3162955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
269-669
               

               
Cow position:
               
chr13:6417680-6418073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
278-529
               

               
Cow position:
               
chr13:34016961-34016709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
279-518
               

               
Cow position:
               
chr13:39629886-39629647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
279-667
               

               
Cow position:
               
chr13:35695358-35695744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
234, 112
               

               
Conread position:
               
281-669
               

               
Cow position:
               
chr13:47590305-47590688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
284-506
               

               
Cow position:
               
chr13:25694624-25694840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
291-541
               

               
Cow position:
               
chr13:34904062-34903819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
291-669
               

               
Cow position:
               
chr13:26098972-26098595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
295-571
               

               
Cow position:
               
chr13:20176098-20175831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
297-506
               

               
Cow position:
               
chr13:36351954-36352158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
297-641
               

               
Cow position:
               
chr13:38387286-38386948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 90
               

               
Conread position:
               
308-462
               

               
Cow position:
               
chr13:19044971-19044817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
309-665
               

               
Cow position:
               
chr13:46660703-46661052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
315-666
               

               
Cow position:
               
chr13:43383615-43383967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
323-467
               

               
Cow position:
               
chr13:60220322-60220182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               
Show alignments to all cow chromosomes.