Cow genome map

Conread name: Lym2-sn63_D07.f

Conread position: 56-666
Cow position: chr15:34141177-34140574 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 69-557
Cow position: chr15:7847988-7847509 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 74-372
Cow position: chr15:2592582-2592870 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 74-669
Cow position: chr15:2590221-2590804 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 45

Conread position: 74-669
Cow position: chr15:2644529-2643936 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 74-669
Cow position: chr15:7267418-7268008 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 74-669
Cow position: chr15:7985610-7985015 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 241

Conread position: 74-669
Cow position: chr15:26932859-26933455 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 93-669
Cow position: chr15:21825703-21826278 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 21

Conread position: 105-569
Cow position: chr15:44861962-44862430 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 307
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 42, 57

Conread position: 106-263
Cow position: chr15:32647209-32647364 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 106-306
Cow position: chr15:31585549-31585349 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 106-385
Cow position: chr15:42597403-42597125 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-539
Cow position: chr15:16784175-16784601 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 106-559
Cow position: chr15:18264913-18264460 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 210

Conread position: 106-577
Cow position: chr15:35739089-35739548 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 106-631
Cow position: chr15:51227971-51228465 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 343
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 49

Conread position: 106-660
Cow position: chr15:33753431-33752879 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 546, 39

Conread position: 106-662
Cow position: chr15:1774297-1774849 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 21

Conread position: 106-669
Cow position: chr15:4081850-4082396 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr15:6563742-6564314 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 124

Conread position: 106-669
Cow position: chr15:12858990-12859553 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr15:21637120-21637685 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 165

Conread position: 106-669
Cow position: chr15:21806698-21807261 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr15:50308616-50308060 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 48

Conread position: 108-634
Cow position: chr15:4626568-4626048 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 100

Conread position: 108-669
Cow position: chr15:37382738-37382180 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 207

Conread position: 109-246
Cow position: chr15:26079608-26079471 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-258
Cow position: chr15:42943754-42943611 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 109-263
Cow position: chr15:6762244-6762090 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 109-275
Cow position: chr15:7547719-7547885 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 109-281
Cow position: chr15:49242464-49242291 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 156, 0

Conread position: 109-285
Cow position: chr15:2898145-2897973 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 109-293
Cow position: chr15:3653224-3653043 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 45

Conread position: 109-298
Cow position: chr15:4654320-4654509 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 109-300
Cow position: chr15:24090680-24090871 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 109-310
Cow position: chr15:2952296-2952101 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 109-310
Cow position: chr15:3152714-3152519 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 156, 45

Conread position: 109-327
Cow position: chr15:38937620-38937835 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 0

Conread position: 109-328
Cow position: chr15:18191-18404 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 45

Conread position: 109-328
Cow position: chr15:2632856-2632638 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 66

Conread position: 109-328
Cow position: chr15:25436222-25436005 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 116, 0

Conread position: 109-331
Cow position: chr15:3792939-3793159 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 82

Conread position: 109-331
Cow position: chr15:5197202-5197423 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 206, 0

Conread position: 109-344
Cow position: chr15:13286254-13286020 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 143

Conread position: 109-345
Cow position: chr15:13430676-13430907 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 109-354
Cow position: chr15:2664240-2664482 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 168, 0

Conread position: 109-364
Cow position: chr15:37373272-37373020 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 252, 48

Conread position: 109-368
Cow position: chr15:21644969-21644717 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 109-370
Cow position: chr15:32491036-32490779 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 109-372
Cow position: chr15:21940171-21939909 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-383
Cow position: chr15:17295852-17296124 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 12

Conread position: 109-383
Cow position: chr15:31270019-31269749 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 109-385
Cow position: chr15:25553994-25554266 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 146, 0

Conread position: 109-396
Cow position: chr15:8102303-8102587 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 246, 45

Conread position: 109-405
Cow position: chr15:35597-35886 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 99, 36

Conread position: 109-405
Cow position: chr15:2560271-2560565 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-409
Cow position: chr15:21662890-21662593 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 207

Conread position: 109-419
Cow position: chr15:16801126-16801435 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-419
Cow position: chr15:18229917-18230229 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 106, 111

Conread position: 109-453
Cow position: chr15:18579578-18579917 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 109-459
Cow position: chr15:4815411-4815753 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 297, 39

Conread position: 109-468
Cow position: chr15:44364502-44364148 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 109-483
Cow position: chr15:561581-561951 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 109-489
Cow position: chr15:9910249-9909871 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 109-489
Cow position: chr15:35404827-35405203 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 81

Conread position: 109-501
Cow position: chr15:11575159-11574777 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 50

Conread position: 109-506
Cow position: chr15:2080183-2080578 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-506
Cow position: chr15:6488621-6489015 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 82

Conread position: 109-506
Cow position: chr15:8753713-8754104 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 152

Conread position: 109-508
Cow position: chr15:2409860-2409478 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 26

Conread position: 109-522
Cow position: chr15:4629394-4628976 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 201

Conread position: 109-524
Cow position: chr15:22539985-22539574 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 18

Conread position: 109-559
Cow position: chr15:19734947-19734498 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-571
Cow position: chr15:1129145-1128683 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 109-586
Cow position: chr15:4953179-4953647 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 109

Conread position: 109-590
Cow position: chr15:33700357-33700850 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 155

Conread position: 109-607
Cow position: chr15:4122636-4123132 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 109-612
Cow position: chr15:677913-678415 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-617
Cow position: chr15:22154501-22155009 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 319
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 66

Conread position: 109-618
Cow position: chr15:6758625-6758116 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-621
Cow position: chr15:2670438-2669947 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 109-621
Cow position: chr15:42939763-42940272 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 204

Conread position: 109-636
Cow position: chr15:20173137-20172618 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 101

Conread position: 109-649
Cow position: chr15:29884459-29883917 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 36

Conread position: 109-654
Cow position: chr15:36940530-36939986 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 89

Conread position: 109-660
Cow position: chr15:45244451-45244991 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 122

Conread position: 109-665
Cow position: chr15:17193711-17193150 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 206

Conread position: 109-665
Cow position: chr15:32701879-32701330 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 36

Conread position: 109-666
Cow position: chr15:312949-312394 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 208

Conread position: 109-666
Cow position: chr15:2899406-2898847 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 206

Conread position: 109-666
Cow position: chr15:4388599-4389156 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr15:4712759-4713317 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 206

Conread position: 109-666
Cow position: chr15:4728016-4728558 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 168

Conread position: 109-666
Cow position: chr15:5197807-5198380 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 206

Conread position: 109-666
Cow position: chr15:6152792-6152235 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr15:7271190-7271749 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 208

Conread position: 109-666
Cow position: chr15:7319418-7319963 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 109-666
Cow position: chr15:12417858-12417306 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 53

Conread position: 109-666
Cow position: chr15:27747668-27747106 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 206

Conread position: 109-666
Cow position: chr15:31357746-31357192 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr15:38983513-38984083 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 133

Conread position: 109-666
Cow position: chr15:42532902-42533447 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr15:42727235-42727780 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 55

Conread position: 109-667
Cow position: chr15:4769356-4769912 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-667
Cow position: chr15:6550762-6550205 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-667
Cow position: chr15:6805564-6806125 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 207

Conread position: 109-667
Cow position: chr15:36671028-36671567 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 12

Conread position: 109-668
Cow position: chr15:44324-44878 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 64

Conread position: 109-668
Cow position: chr15:6589081-6588524 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 75

Conread position: 109-668
Cow position: chr15:8029158-8028607 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 37

Conread position: 109-668
Cow position: chr15:17034775-17034226 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 107

Conread position: 109-668
Cow position: chr15:20458178-20458744 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 22

Conread position: 109-668
Cow position: chr15:22855704-22855147 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 76

Conread position: 109-668
Cow position: chr15:25463672-25463117 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-668
Cow position: chr15:26389111-26388559 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 91

Conread position: 109-669
Cow position: chr15:29456-28897 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:364118-363564 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 70

Conread position: 109-669
Cow position: chr15:442936-442378 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 76

Conread position: 109-669
Cow position: chr15:481436-481975 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 82

Conread position: 109-669
Cow position: chr15:1082283-1082830 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 109-669
Cow position: chr15:1776013-1776572 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 29

Conread position: 109-669
Cow position: chr15:1785618-1786171 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:2015326-2015880 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-669
Cow position: chr15:2533583-2534143 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:3007986-3007429 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 58

Conread position: 109-669
Cow position: chr15:3721281-3720730 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 20

Conread position: 109-669
Cow position: chr15:3892438-3892996 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 140

Conread position: 109-669
Cow position: chr15:4140057-4139502 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 207

Conread position: 109-669
Cow position: chr15:4214021-4214572 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 99

Conread position: 109-669
Cow position: chr15:4219062-4218507 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 172

Conread position: 109-669
Cow position: chr15:4642055-4642611 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr15:4822217-4821660 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 38

Conread position: 109-669
Cow position: chr15:4860097-4859539 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 109-669
Cow position: chr15:4925010-4925556 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 35

Conread position: 109-669
Cow position: chr15:5640739-5640179 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 205

Conread position: 109-669
Cow position: chr15:6120229-6120792 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 170

Conread position: 109-669
Cow position: chr15:6463925-6464473 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 22

Conread position: 109-669
Cow position: chr15:6616650-6617210 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:7586929-7586385 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 64

Conread position: 109-669
Cow position: chr15:7963183-7962650 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 109-669
Cow position: chr15:12442377-12442938 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 206

Conread position: 109-669
Cow position: chr15:13076372-13076936 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 76

Conread position: 109-669
Cow position: chr15:13388495-13387926 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 100

Conread position: 109-669
Cow position: chr15:17398823-17399382 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 213

Conread position: 109-669
Cow position: chr15:18214422-18214980 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 45

Conread position: 109-669
Cow position: chr15:18661339-18661896 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 168

Conread position: 109-669
Cow position: chr15:19191421-19191963 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 73

Conread position: 109-669
Cow position: chr15:20348411-20347860 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 23

Conread position: 109-669
Cow position: chr15:20413427-20413986 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 39

Conread position: 109-669
Cow position: chr15:21152969-21152409 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:21533285-21532727 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-669
Cow position: chr15:21607626-21608173 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:22760152-22759588 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 205

Conread position: 109-669
Cow position: chr15:23666642-23666082 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:25069642-25069083 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:25132809-25133374 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 87

Conread position: 109-669
Cow position: chr15:25165252-25164692 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 205

Conread position: 109-669
Cow position: chr15:34063808-34064354 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 51

Conread position: 109-669
Cow position: chr15:36329608-36329050 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-669
Cow position: chr15:36619300-36618747 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 45

Conread position: 109-669
Cow position: chr15:45944844-45944286 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 207

Conread position: 109-669
Cow position: chr15:47201717-47201150 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 106

Conread position: 109-669
Cow position: chr15:48556571-48557128 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 102

Conread position: 109-669
Cow position: chr15:50142111-50142671 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr15:50151552-50152112 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 42

Conread position: 109-669
Cow position: chr15:51220594-51221150 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 144

Conread position: 110-346
Cow position: chr15:4674186-4674421 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 110-396
Cow position: chr15:29273389-29273108 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 75

Conread position: 110-669
Cow position: chr15:28487276-28486731 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 205

Conread position: 111-665
Cow position: chr15:7941273-7941824 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 34

Conread position: 113-328
Cow position: chr15:1298797-1298586 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 168, 96

Conread position: 113-385
Cow position: chr15:9522344-9522072 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 202

Conread position: 113-562
Cow position: chr15:26591490-26591046 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 113-565
Cow position: chr15:21915962-21916387 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 113-666
Cow position: chr15:35750440-35749888 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 136

Conread position: 114-461
Cow position: chr15:17267371-17267719 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 203

Conread position: 114-504
Cow position: chr15:6367630-6367244 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 46

Conread position: 114-642
Cow position: chr15:32065432-32064908 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 201

Conread position: 114-668
Cow position: chr15:7574658-7575213 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 210

Conread position: 114-669
Cow position: chr15:7565860-7566414 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 201

Conread position: 114-669
Cow position: chr15:37394584-37395114 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 146

Conread position: 114-669
Cow position: chr15:44073304-44073857 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 101

Conread position: 117-370
Cow position: chr15:2021587-2021338 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 217, 68

Conread position: 117-424
Cow position: chr15:23774163-23774460 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 215, 65

Conread position: 117-457
Cow position: chr15:36622802-36622472 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 170

Conread position: 117-620
Cow position: chr15:51910676-51910162 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 65

Conread position: 117-648
Cow position: chr15:35643591-35643075 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 113

Conread position: 117-660
Cow position: chr15:20352942-20352408 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 124

Conread position: 117-668
Cow position: chr15:50344870-50344325 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 93

Conread position: 117-669
Cow position: chr15:609259-608718 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 142

Conread position: 117-669
Cow position: chr15:5497919-5498475 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 37

Conread position: 117-669
Cow position: chr15:13546192-13545681 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 81

Conread position: 117-669
Cow position: chr15:13683203-13683738 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 37

Conread position: 118-349
Cow position: chr15:1601431-1601658 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 227, 126

Conread position: 118-669
Cow position: chr15:45292179-45292730 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 197

Conread position: 119-492
Cow position: chr15:33304925-33304563 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 109

Conread position: 119-506
Cow position: chr15:30045260-30045655 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 119-506
Cow position: chr15:33527697-33527325 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 35

Conread position: 119-517
Cow position: chr15:4895514-4895138 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 119-522
Cow position: chr15:42419084-42418687 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 141

Conread position: 119-531
Cow position: chr15:26157870-26158274 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 204

Conread position: 119-560
Cow position: chr15:2925072-2925505 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 29

Conread position: 119-651
Cow position: chr15:4829198-4829723 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 123

Conread position: 119-668
Cow position: chr15:8629170-8629715 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 125

Conread position: 119-669
Cow position: chr15:67697-67155 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 31

Conread position: 119-669
Cow position: chr15:2928121-2928655 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 142

Conread position: 119-669
Cow position: chr15:4688894-4689437 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 195

Conread position: 119-669
Cow position: chr15:5983489-5984041 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 197

Conread position: 119-669
Cow position: chr15:6648548-6648003 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 119-669
Cow position: chr15:17074501-17073951 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 197

Conread position: 119-669
Cow position: chr15:39091336-39090816 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 109

Conread position: 120-668
Cow position: chr15:12439609-12440123 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 121-669
Cow position: chr15:7512492-7511944 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 194

Conread position: 122-669
Cow position: chr15:23560899-23561439 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 23

Conread position: 122-669
Cow position: chr15:35847058-35847592 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 59

Conread position: 122-669
Cow position: chr15:36423748-36423204 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 48

Conread position: 123-669
Cow position: chr15:28071566-28071026 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 59

Conread position: 123-669
Cow position: chr15:40344382-40343845 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 59

Conread position: 128-341
Cow position: chr15:6658242-6658030 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 187, 0

Conread position: 128-357
Cow position: chr15:10826307-10826533 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 123, 0

Conread position: 128-586
Cow position: chr15:5243176-5242729 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 72

Conread position: 128-588
Cow position: chr15:3791674-3792135 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 63

Conread position: 128-662
Cow position: chr15:18019514-18018992 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 51

Conread position: 128-668
Cow position: chr15:31768678-31768140 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 76

Conread position: 128-669
Cow position: chr15:41029448-41028907 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 187

Conread position: 129-409
Cow position: chr15:52464375-52464097 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 268, 52

Conread position: 129-668
Cow position: chr15:11628274-11628806 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 129-669
Cow position: chr15:38684260-38683747 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 65

Conread position: 131-338
Cow position: chr15:21830812-21831019 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 203, 184

Conread position: 131-668
Cow position: chr15:10477254-10476716 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 134-258
Cow position: chr15:4380448-4380324 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 134-669
Cow position: chr15:35837990-35838514 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 92

Conread position: 134-669
Cow position: chr15:49306672-49307205 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 143

Conread position: 135-669
Cow position: chr15:60506-61034 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 19

Conread position: 135-669
Cow position: chr15:45210890-45211424 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 180

Conread position: 137-669
Cow position: chr15:1329038-1329549 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 114

Conread position: 138-492
Cow position: chr15:22162379-22162043 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 138-669
Cow position: chr15:20404802-20404271 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 177

Conread position: 139-669
Cow position: chr15:2617203-2616670 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 139-669
Cow position: chr15:10736449-10736977 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 19

Conread position: 139-669
Cow position: chr15:22096185-22095664 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 138

Conread position: 139-669
Cow position: chr15:44210675-44210143 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 32

Conread position: 140-466
Cow position: chr15:20647047-20647372 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 141-669
Cow position: chr15:16787759-16787232 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 144-560
Cow position: chr15:24569166-24568751 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 147-441
Cow position: chr15:33455261-33455545 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 7

Conread position: 151-669
Cow position: chr15:20944265-20944784 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 164

Conread position: 157-417
Cow position: chr15:29811844-29811584 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 54

Conread position: 157-457
Cow position: chr15:4874971-4874683 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 61

Conread position: 158-660
Cow position: chr15:8937311-8937800 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 27

Conread position: 160-669
Cow position: chr15:17773446-17772937 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 155

Conread position: 163-669
Cow position: chr15:6158090-6158592 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 152

Conread position: 163-669
Cow position: chr15:52208587-52208085 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 69

Conread position: 164-668
Cow position: chr15:8576056-8576563 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 151

Conread position: 164-669
Cow position: chr15:9620494-9619988 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 151

Conread position: 164-669
Cow position: chr15:10838875-10839372 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 72

Conread position: 165-669
Cow position: chr15:6164196-6163694 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 150

Conread position: 165-669
Cow position: chr15:44260756-44260259 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 20

Conread position: 168-668
Cow position: chr15:11596471-11595971 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 147

Conread position: 168-669
Cow position: chr15:44576309-44576811 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 147

Conread position: 170-669
Cow position: chr15:37743974-37744465 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 27

Conread position: 176-663
Cow position: chr15:28235895-28236380 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 140

Conread position: 179-483
Cow position: chr15:33335386-33335689 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 0

Conread position: 180-334
Cow position: chr15:15738883-15739035 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 5

Conread position: 188-433
Cow position: chr15:36146089-36146334 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 185, 127

Conread position: 192-667
Cow position: chr15:41793395-41792921 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 123

Conread position: 195-489
Cow position: chr15:30811563-30811852 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 125

Conread position: 196-468
Cow position: chr15:53357267-53356997 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 202, 41

Conread position: 196-669
Cow position: chr15:44164549-44165023 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 118

Conread position: 197-586
Cow position: chr15:21156396-21156777 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 58, 119

Conread position: 198-396
Cow position: chr15:22451639-22451839 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 118

Conread position: 198-560
Cow position: chr15:9122026-9122377 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 7, 119

Conread position: 199-456
Cow position: chr15:4933327-4933583 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 202-385
Cow position: chr15:37980839-37980657 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 36

Conread position: 202-444
Cow position: chr15:13188-12947 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 113, 0

Conread position: 202-500
Cow position: chr15:47604246-47604539 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 55

Conread position: 207-486
Cow position: chr15:7508254-7507960 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 24

Conread position: 207-667
Cow position: chr15:17287928-17288395 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 61

Conread position: 207-669
Cow position: chr15:2796297-2796746 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 19

Conread position: 209-548
Cow position: chr15:39630630-39630296 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 9

Conread position: 210-667
Cow position: chr15:29341165-29340694 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 210-669
Cow position: chr15:19215125-19214679 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 90

Conread position: 211-425
Cow position: chr15:1838061-1837860 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 211-461
Cow position: chr15:6537908-6537662 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 214-597
Cow position: chr15:52677388-52677768 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 31

Conread position: 215-613
Cow position: chr15:40171415-40171022 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 220-380
Cow position: chr15:33975429-33975588 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 220-660
Cow position: chr15:16967645-16968082 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 105

Conread position: 222-428
Cow position: chr15:45207941-45207744 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 225-669
Cow position: chr15:40064649-40065091 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 25

Conread position: 234-583
Cow position: chr15:16926885-16927226 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 62

Conread position: 235-498
Cow position: chr15:4730611-4730869 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 79

Conread position: 237-402
Cow position: chr15:15739899-15740063 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 40

Conread position: 237-525
Cow position: chr15:29330242-29329966 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 239-621
Cow position: chr15:16038845-16039216 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 69

Conread position: 240-489
Cow position: chr15:45174676-45174426 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 16

Conread position: 240-667
Cow position: chr15:10569636-10570057 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 42

Conread position: 243-466
Cow position: chr15:18061208-18060986 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 245-495
Cow position: chr15:16485104-16485345 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 245-536
Cow position: chr15:13855594-13855872 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 245-668
Cow position: chr15:13417253-13417670 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 65

Conread position: 245-668
Cow position: chr15:30726251-30725850 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 246-592
Cow position: chr15:41388828-41389155 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 89

Conread position: 250-669
Cow position: chr15:12496774-12497176 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 270
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 294, 70

Conread position: 251-491
Cow position: chr15:53693006-53693242 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 60

Conread position: 251-669
Cow position: chr15:25203978-25203560 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 64

Conread position: 253-532
Cow position: chr15:50085101-50084844 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 257-462
Cow position: chr15:23552845-23552641 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 260-560
Cow position: chr15:39407271-39406966 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 55

Conread position: 262-668
Cow position: chr15:22752426-22752017 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 59

Conread position: 268-525
Cow position: chr15:17694508-17694752 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 268-650
Cow position: chr15:43234092-43233702 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 117, 27

Conread position: 268-669
Cow position: chr15:6959715-6960108 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 47

Conread position: 277-669
Cow position: chr15:24639053-24639433 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 152, 42

Conread position: 278-669
Cow position: chr15:46054716-46055097 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 227, 37

Conread position: 279-669
Cow position: chr15:21840029-21839654 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 281-435
Cow position: chr15:8046540-8046693 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 38

Conread position: 296-506
Cow position: chr15:40006510-40006730 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 20

Conread position: 305-560
Cow position: chr15:33663195-33662941 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 317-659
Cow position: chr15:53352658-53353000 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 318-669
Cow position: chr15:3153977-3154329 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Show alignments to all cow chromosomes.