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Cow genome map

           
Conread name:
           
Lym2-sn63_D07.f
        

               
Conread position:
               
74-506
               

               
Cow position:
               
chr18:10221432-10221007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 0
               

               
Conread position:
               
74-669
               

               
Cow position:
               
chr18:10291983-10292575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
105-588
               

               
Cow position:
               
chr18:21175095-21175573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
106-270
               

               
Cow position:
               
chr18:19468816-19468980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-416
               

               
Cow position:
               
chr18:51653884-51654188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
106-649
               

               
Cow position:
               
chr18:19310451-19310975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 75
               

               
Conread position:
               
106-666
               

               
Cow position:
               
chr18:30844620-30844061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 110
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:13270194-13270749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:16463362-16462808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 132
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:19461564-19462127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:29071705-29072264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:29079021-29079584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr18:33406592-33407138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 213
               

               
Conread position:
               
108-669
               

               
Cow position:
               
chr18:10113301-10113836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
109-232
               

               
Cow position:
               
chr18:17381100-17381223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-242
               

               
Cow position:
               
chr18:22182252-22182119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr18:50835098-50834914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-316
               

               
Cow position:
               
chr18:37583170-37582964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
109-373
               

               
Cow position:
               
chr18:12201244-12200991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
109-402
               

               
Cow position:
               
chr18:32436814-32436520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
109-425
               

               
Cow position:
               
chr18:36776564-36776878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
109-433
               

               
Cow position:
               
chr18:32164644-32164321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-460
               

               
Cow position:
               
chr18:16025373-16025018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 208
               

               
Conread position:
               
109-468
               

               
Cow position:
               
chr18:21797379-21797734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
109-483
               

               
Cow position:
               
chr18:23688459-23688832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-505
               

               
Cow position:
               
chr18:11869774-11870169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr18:51690084-51690490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-555
               

               
Cow position:
               
chr18:8257363-8257807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
109-560
               

               
Cow position:
               
chr18:44261355-44261791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 145
               

               
Conread position:
               
109-587
               

               
Cow position:
               
chr18:37693000-37692520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 98
               

               
Conread position:
               
109-593
               

               
Cow position:
               
chr18:47985184-47985637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 22
               

               
Conread position:
               
109-597
               

               
Cow position:
               
chr18:28928308-28927831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 107
               

               
Conread position:
               
109-640
               

               
Cow position:
               
chr18:41837803-41837272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-646
               

               
Cow position:
               
chr18:19355800-19356331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-654
               

               
Cow position:
               
chr18:5569828-5570353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 38
               

               
Conread position:
               
109-660
               

               
Cow position:
               
chr18:10896481-10897008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 26
               

               
Conread position:
               
109-662
               

               
Cow position:
               
chr18:47745040-47745591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr18:5536259-5536813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 205
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr18:27990044-27990600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:6733676-6733129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 36
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:14419264-14419822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:16173326-16172775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:29863317-29862765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:40484287-40484841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 142
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr18:51484878-51485430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr18:37509255-37509804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 82
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:603177-602619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:14127999-14127442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:16094172-16094725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 201
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:16226519-16227067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
463, 45
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:16857075-16857632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 29
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:17323667-17324221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 141
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:18215726-18215175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:24037559-24037004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:24619716-24620260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 100
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:25354804-25355362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:25972773-25972231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:26243171-26242613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 168
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:26335870-26335314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 45
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:27539719-27540269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 210
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:28969002-28968442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 168
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:29797798-29797237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:30232271-30231723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:30606983-30607543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:31139039-31139596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:33522514-33523079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 45
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:35444081-35443530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 133
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:36511921-36512474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 210
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:36648692-36649222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:40195400-40195958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 20
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:43464485-43463924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:50093157-50092601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:51459554-51458998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 156
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:51602378-51601820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:51697933-51698486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 36
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:52574402-52574950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 64
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:52629971-52629411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 152
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:54047166-54047726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:54065785-54065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 10
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr18:55554538-55555098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 206
               

               
Conread position:
               
110-665
               

               
Cow position:
               
chr18:52692430-52692972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 20
               

               
Conread position:
               
110-669
               

               
Cow position:
               
chr18:23802311-23802867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 205
               

               
Conread position:
               
110-669
               

               
Cow position:
               
chr18:33271925-33272452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
111-669
               

               
Cow position:
               
chr18:17943801-17944363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 221
               

               
Conread position:
               
113-571
               

               
Cow position:
               
chr18:4978566-4978122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 212
               

               
Conread position:
               
113-661
               

               
Cow position:
               
chr18:38158251-38157710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
113-665
               

               
Cow position:
               
chr18:37732980-37733532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 202
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr18:43430297-43430845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 167
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr18:43472889-43473433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 130
               

               
Conread position:
               
114-662
               

               
Cow position:
               
chr18:45980794-45981332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
114-669
               

               
Cow position:
               
chr18:45978674-45979204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 96
               

               
Conread position:
               
115-508
               

               
Cow position:
               
chr18:51663467-51663845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
117-461
               

               
Cow position:
               
chr18:43285010-43284681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 126
               

               
Conread position:
               
117-662
               

               
Cow position:
               
chr18:23659599-23659066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 104
               

               
Conread position:
               
117-667
               

               
Cow position:
               
chr18:30876970-30876432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 91
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr18:1145249-1144713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr18:17335445-17334899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr18:33607530-33608079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 111
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr18:35057321-35057847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr18:36771237-36770692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 146
               

               
Conread position:
               
118-427
               

               
Cow position:
               
chr18:7931283-7930988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
119-412
               

               
Cow position:
               
chr18:28084344-28084637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
282, 196
               

               
Conread position:
               
119-506
               

               
Cow position:
               
chr18:23701501-23701120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
119-523
               

               
Cow position:
               
chr18:1022722-1022328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 28
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr18:15172151-15172582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
119-582
               

               
Cow position:
               
chr18:53872190-53872634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 32
               

               
Conread position:
               
119-638
               

               
Cow position:
               
chr18:33501685-33501167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 158
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr18:2853498-2852941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr18:30035432-30034864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 196
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr18:40342551-40342000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
120-368
               

               
Cow position:
               
chr18:56483365-56483126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
120-651
               

               
Cow position:
               
chr18:52458236-52457717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
120-668
               

               
Cow position:
               
chr18:33850828-33851385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 99
               

               
Conread position:
               
123-669
               

               
Cow position:
               
chr18:22791122-22790567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 208
               

               
Conread position:
               
128-392
               

               
Cow position:
               
chr18:10890064-10890317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
209, 49
               

               
Conread position:
               
129-405
               

               
Cow position:
               
chr18:6866534-6866809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
131-420
               

               
Cow position:
               
chr18:29946764-29947045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
131-663
               

               
Cow position:
               
chr18:55137835-55137291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
131-668
               

               
Cow position:
               
chr18:17670661-17670127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
131-669
               

               
Cow position:
               
chr18:42080710-42080173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
134-385
               

               
Cow position:
               
chr18:51465185-51464933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
102, 183
               

               
Conread position:
               
134-437
               

               
Cow position:
               
chr18:52462765-52462462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 151
               

               
Conread position:
               
135-669
               

               
Cow position:
               
chr18:3190057-3190591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 180
               

               
Conread position:
               
135-669
               

               
Cow position:
               
chr18:7049898-7050431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 189
               

               
Conread position:
               
137-667
               

               
Cow position:
               
chr18:6104086-6103575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
139-506
               

               
Cow position:
               
chr18:35296468-35296818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
139-669
               

               
Cow position:
               
chr18:42609359-42608829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 176
               

               
Conread position:
               
141-526
               

               
Cow position:
               
chr18:46869475-46869844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
143-395
               

               
Cow position:
               
chr18:89467-89724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
144-662
               

               
Cow position:
               
chr18:52656117-52656636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 52
               

               
Conread position:
               
144-669
               

               
Cow position:
               
chr18:55436812-55436287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 171
               

               
Conread position:
               
157-607
               

               
Cow position:
               
chr18:29240656-29241106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 123
               

               
Conread position:
               
157-669
               

               
Cow position:
               
chr18:27193844-27194347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 59
               

               
Conread position:
               
158-658
               

               
Cow position:
               
chr18:52697967-52698459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
163-438
               

               
Cow position:
               
chr18:19463121-19462847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
163-669
               

               
Cow position:
               
chr18:36223784-36224281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 53
               

               
Conread position:
               
164-669
               

               
Cow position:
               
chr18:51580443-51579938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 155
               

               
Conread position:
               
165-666
               

               
Cow position:
               
chr18:26305616-26306109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 95
               

               
Conread position:
               
166-436
               

               
Cow position:
               
chr18:45905529-45905255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
166-669
               

               
Cow position:
               
chr18:32122336-32121837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 33
               

               
Conread position:
               
167-524
               

               
Cow position:
               
chr18:21580209-21579853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
167-669
               

               
Cow position:
               
chr18:29059475-29058980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 44
               

               
Conread position:
               
168-668
               

               
Cow position:
               
chr18:51272790-51272294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 173
               

               
Conread position:
               
171-658
               

               
Cow position:
               
chr18:7358768-7359250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
171-669
               

               
Cow position:
               
chr18:39002775-39002297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 121
               

               
Conread position:
               
187-669
               

               
Cow position:
               
chr18:16640813-16641294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 128
               

               
Conread position:
               
191-669
               

               
Cow position:
               
chr18:42628733-42629211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 124
               

               
Conread position:
               
193-583
               

               
Cow position:
               
chr18:41957893-41958279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
194-560
               

               
Cow position:
               
chr18:3149366-3148997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
195-535
               

               
Cow position:
               
chr18:35884041-35883713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
195-669
               

               
Cow position:
               
chr18:13508695-13508242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 31
               

               
Conread position:
               
195-669
               

               
Cow position:
               
chr18:33157909-33158369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 124
               

               
Conread position:
               
196-396
               

               
Cow position:
               
chr18:24219318-24219120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
198-668
               

               
Cow position:
               
chr18:15911494-15911973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 117
               

               
Conread position:
               
204-665
               

               
Cow position:
               
chr18:36135258-36134795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
204-669
               

               
Cow position:
               
chr18:4954532-4954994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 111
               

               
Conread position:
               
204-669
               

               
Cow position:
               
chr18:51345670-51346135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 112
               

               
Conread position:
               
208-640
               

               
Cow position:
               
chr18:7963942-7964371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
209-669
               

               
Cow position:
               
chr18:3081563-3081111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 112
               

               
Conread position:
               
209-669
               

               
Cow position:
               
chr18:6376928-6377390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 8
               

               
Conread position:
               
210-669
               

               
Cow position:
               
chr18:43129476-43129913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 50
               

               
Conread position:
               
211-617
               

               
Cow position:
               
chr18:48301077-48300676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
211-669
               

               
Cow position:
               
chr18:7649042-7649493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
211-669
               

               
Cow position:
               
chr18:26845469-26845915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 20
               

               
Conread position:
               
217-669
               

               
Cow position:
               
chr18:38342143-38341700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
219-424
               

               
Cow position:
               
chr18:7953041-7953247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
180, 96
               

               
Conread position:
               
219-667
               

               
Cow position:
               
chr18:36477178-36477638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr18:11271602-11271158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 96
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr18:15688399-15688827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 96
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr18:48548220-48548658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
220-548
               

               
Cow position:
               
chr18:23473447-23473125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
221-621
               

               
Cow position:
               
chr18:7946103-7946496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 94
               

               
Conread position:
               
222-669
               

               
Cow position:
               
chr18:39494188-39494616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 93
               

               
Conread position:
               
222-669
               

               
Cow position:
               
chr18:54167242-54166809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 93
               

               
Conread position:
               
223-460
               

               
Cow position:
               
chr18:12275505-12275740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
230-669
               

               
Cow position:
               
chr18:33617014-33616575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 85
               

               
Conread position:
               
237-669
               

               
Cow position:
               
chr18:27995094-27995526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 78
               

               
Conread position:
               
237-669
               

               
Cow position:
               
chr18:29586197-29585765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 78
               

               
Conread position:
               
243-460
               

               
Cow position:
               
chr18:31564050-31563839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr18:45909600-45909370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
245-533
               

               
Cow position:
               
chr18:14869381-14869660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
245-643
               

               
Cow position:
               
chr18:21236999-21236611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
245-669
               

               
Cow position:
               
chr18:51247092-51247497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
337, 11
               

               
Conread position:
               
246-567
               

               
Cow position:
               
chr18:51487484-51487167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 9
               

               
Conread position:
               
246-667
               

               
Cow position:
               
chr18:43637814-43638236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 69
               

               
Conread position:
               
246-669
               

               
Cow position:
               
chr18:4369923-4369514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
250-669
               

               
Cow position:
               
chr18:27833998-27833580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 65
               

               
Conread position:
               
251-668
               

               
Cow position:
               
chr18:45614207-45614616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 121
               

               
Conread position:
               
251-669
               

               
Cow position:
               
chr18:36778736-36779156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 66
               

               
Conread position:
               
252-586
               

               
Cow position:
               
chr18:12241252-12241575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 8
               

               
Conread position:
               
255-668
               

               
Cow position:
               
chr18:39279898-39279497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 60
               

               
Conread position:
               
257-669
               

               
Cow position:
               
chr18:55022235-55022648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 59
               

               
Conread position:
               
265-499
               

               
Cow position:
               
chr18:6425543-6425322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
265-668
               

               
Cow position:
               
chr18:42746666-42747075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
268-619
               

               
Cow position:
               
chr18:699581-699238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
269-669
               

               
Cow position:
               
chr18:36233428-36233028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
269-669
               

               
Cow position:
               
chr18:41498314-41498697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
269-669
               

               
Cow position:
               
chr18:50114835-50114441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 51
               

               
Conread position:
               
270-568
               

               
Cow position:
               
chr18:23879816-23880113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
195, 49
               

               
Conread position:
               
281-525
               

               
Cow position:
               
chr18:44229770-44229540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
290-642
               

               
Cow position:
               
chr18:19401743-19401394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
292-651
               

               
Cow position:
               
chr18:52685452-52685094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
277, 16
               

               
Conread position:
               
295-669
               

               
Cow position:
               
chr18:28530981-28530608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
296-669
               

               
Cow position:
               
chr18:51692347-51691975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 232
               

               
Conread position:
               
308-667
               

               
Cow position:
               
chr18:30248976-30248619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 11
               

               
Conread position:
               
317-621
               

               
Cow position:
               
chr18:3151066-3150762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
322-669
               

               
Cow position:
               
chr18:30716883-30716545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               
Show alignments to all cow chromosomes.