Cow genome map

Conread name: Lym2-sn63_D07.f

Conread position: 74-669
Cow position: chr21:47428674-47429266 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 77

Conread position: 76-669
Cow position: chr21:21001051-21000459 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 390
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 38

Conread position: 105-669
Cow position: chr21:2503106-2503670 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 106-347
Cow position: chr21:33420605-33420373 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 106-368
Cow position: chr21:18846971-18846712 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 106-384
Cow position: chr21:14533976-14534253 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-520
Cow position: chr21:37344291-37343889 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 269
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 39

Conread position: 106-548
Cow position: chr21:9895725-9896148 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 94

Conread position: 106-657
Cow position: chr21:36376353-36376894 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 168

Conread position: 106-660
Cow position: chr21:26633866-26633313 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 45

Conread position: 106-668
Cow position: chr21:33307329-33307885 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 13

Conread position: 106-668
Cow position: chr21:39417440-39417996 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 63

Conread position: 106-669
Cow position: chr21:4719457-4718894 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr21:22855276-22855818 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 69

Conread position: 106-669
Cow position: chr21:26757360-26756797 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr21:26874955-26875517 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 124

Conread position: 106-669
Cow position: chr21:34900311-34899759 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 107-669
Cow position: chr21:17415469-17414924 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 28

Conread position: 107-669
Cow position: chr21:31252351-31252924 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 107-669
Cow position: chr21:31974501-31975068 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 103

Conread position: 108-454
Cow position: chr21:4739004-4739347 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 281, 37

Conread position: 108-654
Cow position: chr21:30354224-30354759 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 86

Conread position: 108-668
Cow position: chr21:470654-471218 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 134

Conread position: 108-668
Cow position: chr21:44805202-44804663 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 74

Conread position: 109-240
Cow position: chr21:449534-449666 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 109-263
Cow position: chr21:15398499-15398651 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 109-263
Cow position: chr21:34180731-34180578 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 109-301
Cow position: chr21:19098816-19099005 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 109-313
Cow position: chr21:2664799-2664595 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 109-331
Cow position: chr21:11405514-11405293 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 206, 0

Conread position: 109-345
Cow position: chr21:39428768-39429003 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 204, 0

Conread position: 109-407
Cow position: chr21:34657360-34657650 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 89

Conread position: 109-408
Cow position: chr21:28881039-28881332 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 37

Conread position: 109-419
Cow position: chr21:13162800-13163086 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 45

Conread position: 109-438
Cow position: chr21:4188902-4189234 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 237

Conread position: 109-452
Cow position: chr21:39059953-39059616 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 117

Conread position: 109-458
Cow position: chr21:39400601-39400958 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 9, 159

Conread position: 109-463
Cow position: chr21:30565120-30565464 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 109-465
Cow position: chr21:17144054-17144409 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-465
Cow position: chr21:32396658-32396310 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 109-506
Cow position: chr21:32534195-32534574 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 109-513
Cow position: chr21:23548893-23548496 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 13

Conread position: 109-518
Cow position: chr21:38866246-38865838 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-523
Cow position: chr21:46974364-46973966 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 109-528
Cow position: chr21:42460691-42460290 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 109-562
Cow position: chr21:32773301-32773753 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 109-574
Cow position: chr21:1263238-1263694 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 294
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 66

Conread position: 109-588
Cow position: chr21:49655817-49655341 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-594
Cow position: chr21:30297845-30298329 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-601
Cow position: chr21:48273831-48273340 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-605
Cow position: chr21:34823542-34824037 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-623
Cow position: chr21:28597958-28598446 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 66

Conread position: 109-652
Cow position: chr21:16277768-16278306 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 213

Conread position: 109-654
Cow position: chr21:7155754-7156284 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 28

Conread position: 109-654
Cow position: chr21:36534842-36534303 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-661
Cow position: chr21:33934539-33933996 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 130

Conread position: 109-662
Cow position: chr21:13300194-13300736 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 45

Conread position: 109-662
Cow position: chr21:25156666-25157201 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 19

Conread position: 109-662
Cow position: chr21:28915609-28915058 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 148

Conread position: 109-665
Cow position: chr21:27148186-27147630 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr21:1195904-1196460 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 206

Conread position: 109-666
Cow position: chr21:2878471-2877919 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 22

Conread position: 109-666
Cow position: chr21:26400398-26399862 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 36

Conread position: 109-666
Cow position: chr21:27608334-27607770 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 18

Conread position: 109-666
Cow position: chr21:31512904-31512348 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 121

Conread position: 109-666
Cow position: chr21:33317000-33316442 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr21:33832613-33832055 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 57

Conread position: 109-666
Cow position: chr21:47648706-47649264 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 172

Conread position: 109-667
Cow position: chr21:20911059-20910511 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 109

Conread position: 109-667
Cow position: chr21:21026840-21027382 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 99

Conread position: 109-668
Cow position: chr21:33965353-33964816 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 109-669
Cow position: chr21:1766147-1765610 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 48

Conread position: 109-669
Cow position: chr21:2514217-2514770 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-669
Cow position: chr21:3782139-3782696 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 191

Conread position: 109-669
Cow position: chr21:4733165-4732621 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 60

Conread position: 109-669
Cow position: chr21:4812972-4812408 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 107

Conread position: 109-669
Cow position: chr21:4898598-4898047 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 205

Conread position: 109-669
Cow position: chr21:5020512-5021064 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 204

Conread position: 109-669
Cow position: chr21:6623180-6623745 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 25

Conread position: 109-669
Cow position: chr21:6765659-6765104 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 109-669
Cow position: chr21:7047814-7047259 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 36

Conread position: 109-669
Cow position: chr21:10570653-10571196 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:10853631-10854182 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:11144484-11143924 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 210

Conread position: 109-669
Cow position: chr21:11509307-11509862 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:12153189-12153731 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 68

Conread position: 109-669
Cow position: chr21:13314816-13315385 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 112

Conread position: 109-669
Cow position: chr21:15546322-15545766 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 134

Conread position: 109-669
Cow position: chr21:16890476-16889918 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 109-669
Cow position: chr21:18819268-18818736 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 12

Conread position: 109-669
Cow position: chr21:19627342-19626784 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:20244234-20243697 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr21:22719731-22719178 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 33

Conread position: 109-669
Cow position: chr21:23329977-23329417 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:23341017-23341577 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:25598039-25598590 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 205

Conread position: 109-669
Cow position: chr21:27066233-27065674 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:27287345-27287901 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 50

Conread position: 109-669
Cow position: chr21:27375472-27376046 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 107

Conread position: 109-669
Cow position: chr21:27620134-27619594 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr21:28259036-28259586 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 39

Conread position: 109-669
Cow position: chr21:28476668-28477221 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 186

Conread position: 109-669
Cow position: chr21:29423429-29423984 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 45

Conread position: 109-669
Cow position: chr21:29499904-29500458 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 206

Conread position: 109-669
Cow position: chr21:32237705-32238265 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:33256922-33257480 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:33710133-33709574 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 10

Conread position: 109-669
Cow position: chr21:34684415-34684948 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 120

Conread position: 109-669
Cow position: chr21:37298505-37299063 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 207

Conread position: 109-669
Cow position: chr21:37923553-37924102 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 46

Conread position: 109-669
Cow position: chr21:39470398-39469839 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:41796355-41795798 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 119

Conread position: 109-669
Cow position: chr21:42917159-42917719 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr21:43404071-43403512 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 95

Conread position: 109-669
Cow position: chr21:47168326-47168887 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 206

Conread position: 109-669
Cow position: chr21:47977633-47978193 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr21:48530534-48531106 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 44

Conread position: 110-433
Cow position: chr21:49647598-49647286 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 42

Conread position: 110-462
Cow position: chr21:47360802-47360456 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 110, 66

Conread position: 110-508
Cow position: chr21:6966105-6965709 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 110-665
Cow position: chr21:36163922-36163364 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 110-669
Cow position: chr21:4079391-4079950 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 22

Conread position: 110-669
Cow position: chr21:33728475-33729031 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 112-385
Cow position: chr21:25986785-25987055 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 113-583
Cow position: chr21:9010738-9010266 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 151

Conread position: 113-666
Cow position: chr21:149517-150069 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 202

Conread position: 113-669
Cow position: chr21:19351491-19350935 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 202

Conread position: 113-669
Cow position: chr21:30966573-30966017 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 164

Conread position: 114-424
Cow position: chr21:23784031-23783724 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 52

Conread position: 114-666
Cow position: chr21:13302577-13303118 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 99

Conread position: 114-669
Cow position: chr21:4559699-4559147 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 117

Conread position: 114-669
Cow position: chr21:4586308-4585751 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 206

Conread position: 114-669
Cow position: chr21:25814032-25813504 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 14

Conread position: 116-571
Cow position: chr21:27343025-27342576 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 66

Conread position: 116-669
Cow position: chr21:9208686-9209232 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 112

Conread position: 116-669
Cow position: chr21:13735788-13735236 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 161

Conread position: 117-310
Cow position: chr21:3804406-3804214 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 117-354
Cow position: chr21:27522448-27522219 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 117-560
Cow position: chr21:33983901-33983457 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 202

Conread position: 117-662
Cow position: chr21:18285180-18285720 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 198

Conread position: 117-665
Cow position: chr21:3766396-3765845 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 198

Conread position: 117-667
Cow position: chr21:24887024-24887573 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 34

Conread position: 117-669
Cow position: chr21:27125344-27124795 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 198

Conread position: 117-669
Cow position: chr21:28908766-28908218 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 117-669
Cow position: chr21:38450614-38450086 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 86

Conread position: 117-669
Cow position: chr21:45782351-45781811 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 62

Conread position: 117-669
Cow position: chr21:48291977-48291433 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 37

Conread position: 118-559
Cow position: chr21:18787134-18786700 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 163

Conread position: 118-669
Cow position: chr21:44862216-44861666 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 44

Conread position: 119-368
Cow position: chr21:38026994-38027243 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 104, 197

Conread position: 119-483
Cow position: chr21:37147408-37147039 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 200

Conread position: 119-493
Cow position: chr21:25190027-25190404 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 119-506
Cow position: chr21:23501299-23500913 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 117

Conread position: 119-506
Cow position: chr21:31275720-31276099 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 119-582
Cow position: chr21:22463567-22464027 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 197

Conread position: 119-616
Cow position: chr21:2419573-2420066 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 132

Conread position: 119-628
Cow position: chr21:4191670-4192177 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 92

Conread position: 119-629
Cow position: chr21:46831190-46830681 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 94

Conread position: 119-669
Cow position: chr21:81123-81669 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 39

Conread position: 119-669
Cow position: chr21:2293806-2293267 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 196

Conread position: 119-669
Cow position: chr21:2768467-2767908 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 107

Conread position: 119-669
Cow position: chr21:30595714-30595166 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 196

Conread position: 119-669
Cow position: chr21:30627703-30627162 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 159

Conread position: 119-669
Cow position: chr21:34255202-34254683 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 58

Conread position: 119-669
Cow position: chr21:36506462-36505916 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 132

Conread position: 120-669
Cow position: chr21:5010093-5009546 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 193

Conread position: 121-668
Cow position: chr21:2537779-2537254 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 139

Conread position: 122-492
Cow position: chr21:44219058-44219425 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 123-490
Cow position: chr21:47926774-47927133 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 326, 68

Conread position: 123-660
Cow position: chr21:8071717-8071187 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 31

Conread position: 128-517
Cow position: chr21:4722041-4722419 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 206, 17

Conread position: 128-668
Cow position: chr21:21941172-21940659 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 39

Conread position: 128-669
Cow position: chr21:31949801-31950339 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 187

Conread position: 129-544
Cow position: chr21:649293-648877 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 56

Conread position: 130-331
Cow position: chr21:27428728-27428534 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 130-662
Cow position: chr21:47532121-47532622 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 185

Conread position: 131-328
Cow position: chr21:36893069-36892872 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 131-566
Cow position: chr21:19967240-19967671 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 11

Conread position: 131-668
Cow position: chr21:2905404-2904868 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 84

Conread position: 131-669
Cow position: chr21:36892844-36892306 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 184

Conread position: 132-306
Cow position: chr21:8617815-8617645 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 134-568
Cow position: chr21:48234924-48234495 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 48

Conread position: 134-669
Cow position: chr21:1057853-1058395 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 127

Conread position: 134-669
Cow position: chr21:3046727-3047260 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 156

Conread position: 134-669
Cow position: chr21:5642448-5641912 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 445

Conread position: 135-349
Cow position: chr21:1284554-1284342 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 135-506
Cow position: chr21:17720973-17721340 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 86, 76

Conread position: 135-669
Cow position: chr21:19964999-19965520 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 111

Conread position: 137-417
Cow position: chr21:27263081-27263354 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 52

Conread position: 137-582
Cow position: chr21:48195847-48196277 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 137-669
Cow position: chr21:32814746-32814221 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 143-548
Cow position: chr21:13707625-13707229 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 153, 134

Conread position: 150-669
Cow position: chr21:5596197-5596699 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 165

Conread position: 157-585
Cow position: chr21:43117-43544 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 27

Conread position: 157-662
Cow position: chr21:13090367-13089883 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 157-662
Cow position: chr21:28988706-28989201 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 84

Conread position: 157-669
Cow position: chr21:26628182-26628693 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 158

Conread position: 157-669
Cow position: chr21:28811169-28810653 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 160-515
Cow position: chr21:2928457-2928104 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 156

Conread position: 160-669
Cow position: chr21:42558191-42558700 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 155

Conread position: 164-621
Cow position: chr21:42842861-42842404 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 45

Conread position: 170-457
Cow position: chr21:23585519-23585805 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 178-669
Cow position: chr21:21217038-21216545 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 7

Conread position: 179-354
Cow position: chr21:33245833-33245656 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 139

Conread position: 187-506
Cow position: chr21:10043026-10043342 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 188-400
Cow position: chr21:33901259-33901048 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 192-669
Cow position: chr21:16575998-16575521 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 123

Conread position: 192-669
Cow position: chr21:28210318-28210782 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 19

Conread position: 193-642
Cow position: chr21:4035829-4035395 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 33

Conread position: 193-669
Cow position: chr21:17207628-17208092 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 122

Conread position: 196-484
Cow position: chr21:42364389-42364674 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 196-657
Cow position: chr21:39700980-39700520 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 119

Conread position: 196-668
Cow position: chr21:26830110-26829642 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 198-441
Cow position: chr21:13437554-13437799 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 118

Conread position: 198-582
Cow position: chr21:44093037-44092667 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 102

Conread position: 199-669
Cow position: chr21:18573979-18574440 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 116

Conread position: 199-669
Cow position: chr21:38907649-38908135 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 324
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 146, 73

Conread position: 200-654
Cow position: chr21:28028088-28028543 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 19

Conread position: 200-669
Cow position: chr21:31499460-31499921 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 307
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 37

Conread position: 202-562
Cow position: chr21:30850321-30850680 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 202-645
Cow position: chr21:49470091-49470516 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 287
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 71

Conread position: 204-500
Cow position: chr21:4282952-4282653 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 114

Conread position: 207-501
Cow position: chr21:12571282-12571572 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 169, 108

Conread position: 209-501
Cow position: chr21:20577939-20577646 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 117

Conread position: 209-524
Cow position: chr21:30313161-30313467 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 198, 11

Conread position: 209-548
Cow position: chr21:21412123-21411801 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 195, 85

Conread position: 209-668
Cow position: chr21:21020777-21021240 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 301
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 57

Conread position: 211-669
Cow position: chr21:3497038-3496580 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 104

Conread position: 219-559
Cow position: chr21:30858418-30858768 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 96

Conread position: 219-668
Cow position: chr21:20588183-20588626 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 49

Conread position: 219-669
Cow position: chr21:7597795-7597345 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 96

Conread position: 220-669
Cow position: chr21:13111645-13111201 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 95

Conread position: 221-669
Cow position: chr21:38899932-38900380 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 10

Conread position: 224-669
Cow position: chr21:25479752-25480197 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 91

Conread position: 224-669
Cow position: chr21:48638569-48638147 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 91

Conread position: 225-669
Cow position: chr21:35742984-35742557 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 90

Conread position: 229-559
Cow position: chr21:8890367-8890711 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 231-669
Cow position: chr21:19973914-19974346 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 232-669
Cow position: chr21:12076244-12075811 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 44

Conread position: 239-621
Cow position: chr21:26240762-26241102 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 244-669
Cow position: chr21:4278809-4279231 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 52

Conread position: 245-620
Cow position: chr21:8419618-8419997 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 109, 70

Conread position: 245-651
Cow position: chr21:9329553-9329148 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 249-669
Cow position: chr21:5593810-5593402 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 142, 23

Conread position: 250-669
Cow position: chr21:26855187-26854767 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 66

Conread position: 251-444
Cow position: chr21:10239880-10239696 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 251-669
Cow position: chr21:24697665-24698073 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 68

Conread position: 251-669
Cow position: chr21:34181173-34181591 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 256-662
Cow position: chr21:9201367-9201776 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 59

Conread position: 256-669
Cow position: chr21:7038680-7038267 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 59

Conread position: 265-669
Cow position: chr21:5594858-5595259 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 54

Conread position: 268-559
Cow position: chr21:34591963-34591679 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 281, 47

Conread position: 268-583
Cow position: chr21:12100205-12100510 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 5, 49

Conread position: 268-667
Cow position: chr21:40618418-40618028 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 295, 51

Conread position: 268-669
Cow position: chr21:13189629-13190030 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 53

Conread position: 269-542
Cow position: chr21:4861953-4861688 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 7, 47

Conread position: 269-668
Cow position: chr21:33349900-33350298 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 36

Conread position: 269-669
Cow position: chr21:4137636-4137251 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 255
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 51

Conread position: 278-669
Cow position: chr21:1463441-1463829 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 279-665
Cow position: chr21:24606619-24606988 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 42

Conread position: 280-560
Cow position: chr21:40083071-40083345 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 258, 35

Conread position: 280-623
Cow position: chr21:13286704-13287040 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 92, 35

Conread position: 286-559
Cow position: chr21:28625263-28625523 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 290-649
Cow position: chr21:10668779-10668437 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 29

Conread position: 296-453
Cow position: chr21:13678168-13678019 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 303-622
Cow position: chr21:37874107-37873792 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 307-668
Cow position: chr21:29214920-29214561 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 313-649
Cow position: chr21:33947833-33947503 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 74

Conread position: 315-553
Cow position: chr21:30894256-30894494 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 101

Show alignments to all cow chromosomes.