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Cow genome map

           
Conread name:
           
Lym2-sn63_D07.f
        

               
Conread position:
               
74-466
               

               
Cow position:
               
chr24:14194604-14194214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 8
               

               
Conread position:
               
74-669
               

               
Cow position:
               
chr24:3850839-3851434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 241
               

               
Conread position:
               
75-646
               

               
Cow position:
               
chr24:45086768-45087340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 145
               

               
Conread position:
               
87-669
               

               
Cow position:
               
chr24:16601292-16600706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 19
               

               
Conread position:
               
92-669
               

               
Cow position:
               
chr24:12696861-12696285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
504, 223
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:3162746-3163309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:9900647-9901210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 208
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:15935205-15935775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:25372379-25372941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 171
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:28497857-28497316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:31759012-31758462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:36307856-36308415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:40272123-40272681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
106-669
               

               
Cow position:
               
chr24:40428418-40427853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 209
               

               
Conread position:
               
107-506
               

               
Cow position:
               
chr24:33937206-33937603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 171
               

               
Conread position:
               
108-535
               

               
Cow position:
               
chr24:16297920-16297502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
108-667
               

               
Cow position:
               
chr24:7467032-7466485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
109-241
               

               
Cow position:
               
chr24:9546451-9546583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-252
               

               
Cow position:
               
chr24:6079704-6079849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
109-343
               

               
Cow position:
               
chr24:17323973-17324203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr24:25698223-25698473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
109-370
               

               
Cow position:
               
chr24:36721723-36721984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 232
               

               
Conread position:
               
109-375
               

               
Cow position:
               
chr24:5279491-5279756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr24:7960237-7959950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr24:2947839-2948137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
109-414
               

               
Cow position:
               
chr24:25439480-25439784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
109-419
               

               
Cow position:
               
chr24:14609586-14609288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
282, 42
               

               
Conread position:
               
109-427
               

               
Cow position:
               
chr24:9088828-9088526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
109-429
               

               
Cow position:
               
chr24:19643573-19643883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr24:19688300-19687968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr24:14146886-14146542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 42
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr24:20367645-20367989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
109-461
               

               
Cow position:
               
chr24:12119683-12119339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
109-467
               

               
Cow position:
               
chr24:33122206-33122554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 60
               

               
Conread position:
               
109-508
               

               
Cow position:
               
chr24:38641654-38642055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
207, 73
               

               
Conread position:
               
109-515
               

               
Cow position:
               
chr24:27148384-27148796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 19
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr24:40551904-40552320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
109-535
               

               
Cow position:
               
chr24:36779550-36779964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
109-536
               

               
Cow position:
               
chr24:26388614-26388204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
109-536
               

               
Cow position:
               
chr24:36036547-36036117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 76
               

               
Conread position:
               
109-557
               

               
Cow position:
               
chr24:39956822-39956384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
109-560
               

               
Cow position:
               
chr24:35823926-35823477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 206
               

               
Conread position:
               
109-594
               

               
Cow position:
               
chr24:9071562-9071084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 45
               

               
Conread position:
               
109-644
               

               
Cow position:
               
chr24:31301984-31302499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 57
               

               
Conread position:
               
109-646
               

               
Cow position:
               
chr24:6412757-6413294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-652
               

               
Cow position:
               
chr24:26847326-26846786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 66
               

               
Conread position:
               
109-661
               

               
Cow position:
               
chr24:13491775-13492326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 133
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr24:10244269-10243727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 67
               

               
Conread position:
               
109-665
               

               
Cow position:
               
chr24:40150108-40149563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 169
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:9549543-9550094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 112
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:12332428-12331871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 117
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:23052609-23052062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 343
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:29190567-29191119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 61
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:40467134-40466579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-666
               

               
Cow position:
               
chr24:41005757-41006308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 26
               

               
Conread position:
               
109-667
               

               
Cow position:
               
chr24:20283931-20283376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 18
               

               
Conread position:
               
109-667
               

               
Cow position:
               
chr24:22975087-22975645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 121
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr24:1841593-1841033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 206
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr24:14250304-14249745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 107
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr24:14376364-14375824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
109-668
               

               
Cow position:
               
chr24:18223201-18222657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:207714-207167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 23
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:3793761-3794321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:5863074-5862515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:5929058-5929617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:5990904-5990349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 18
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:6020799-6020240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 204
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:6035902-6035341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:6326092-6325533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:6442717-6443275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:7597280-7596724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:7748905-7749456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 168
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:11104873-11104313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:11208328-11207768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:12090259-12090811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:13496563-13497139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 205
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:14760171-14760737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 207
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:15296394-15296954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:16081208-16080648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 201
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:16908582-16909137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 91
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:17161699-17161139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:17188995-17188433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:17365694-17365147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 70
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:17566129-17566684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 22
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:17764320-17763764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:18112734-18113295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 111
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:18267207-18266654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 171
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:20604028-20604587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:22794838-22795394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:22953841-22954391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:26412329-26412885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 19
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:31067766-31067216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:32608590-32609147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 210
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:35067498-35066956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 64
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:38296335-38296895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 206
               

               
Conread position:
               
109-669
               

               
Cow position:
               
chr24:38588061-38588617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 207
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr24:6524277-6524591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 164
               

               
Conread position:
               
110-666
               

               
Cow position:
               
chr24:32853492-32854044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 205
               

               
Conread position:
               
110-669
               

               
Cow position:
               
chr24:22047789-22047235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 205
               

               
Conread position:
               
113-508
               

               
Cow position:
               
chr24:13191444-13191837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 147
               

               
Conread position:
               
113-662
               

               
Cow position:
               
chr24:8607612-8608160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 202
               

               
Conread position:
               
113-668
               

               
Cow position:
               
chr24:5910090-5910657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 212
               

               
Conread position:
               
113-668
               

               
Cow position:
               
chr24:12199083-12198520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr24:12147304-12146751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 124
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr24:13235552-13236105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr24:14352635-14353184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 202
               

               
Conread position:
               
113-669
               

               
Cow position:
               
chr24:29084382-29083820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
114-666
               

               
Cow position:
               
chr24:13374231-13373672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 202
               

               
Conread position:
               
114-669
               

               
Cow position:
               
chr24:39067586-39067024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
114-669
               

               
Cow position:
               
chr24:40519319-40518774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 205
               

               
Conread position:
               
116-668
               

               
Cow position:
               
chr24:41671147-41671690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
117-370
               

               
Cow position:
               
chr24:14516167-14515918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
117-519
               

               
Cow position:
               
chr24:36556292-36555908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 20
               

               
Conread position:
               
117-667
               

               
Cow position:
               
chr24:31381686-31382206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
117-667
               

               
Cow position:
               
chr24:32823835-32823297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 202
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr24:6415449-6416001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
117-669
               

               
Cow position:
               
chr24:15372067-15372627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
118-522
               

               
Cow position:
               
chr24:17368634-17368242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 133
               

               
Conread position:
               
119-375
               

               
Cow position:
               
chr24:8431661-8431911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
119-408
               

               
Cow position:
               
chr24:36726445-36726728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
119-470
               

               
Cow position:
               
chr24:12348104-12347757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr24:28336768-28336386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
119-642
               

               
Cow position:
               
chr24:5768772-5768251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
119-643
               

               
Cow position:
               
chr24:32849428-32849940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
119-650
               

               
Cow position:
               
chr24:6666498-6665983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 197
               

               
Conread position:
               
119-660
               

               
Cow position:
               
chr24:16646621-16646115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 35
               

               
Conread position:
               
119-665
               

               
Cow position:
               
chr24:17105588-17105048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 111
               

               
Conread position:
               
119-668
               

               
Cow position:
               
chr24:15667458-15666901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 66
               

               
Conread position:
               
119-668
               

               
Cow position:
               
chr24:22911962-22912501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
119-668
               

               
Cow position:
               
chr24:27230043-27229498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 102
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr24:11462722-11462171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr24:29179655-29180185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 141
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr24:32361564-32361020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 54
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr24:36710131-36710662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
119-669
               

               
Cow position:
               
chr24:43634403-43634940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
120-668
               

               
Cow position:
               
chr24:39501303-39500778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
122-394
               

               
Cow position:
               
chr24:22820983-22821255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
122-668
               

               
Cow position:
               
chr24:20507760-20507212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
122-668
               

               
Cow position:
               
chr24:38813936-38814480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 156
               

               
Conread position:
               
123-661
               

               
Cow position:
               
chr24:30870676-30870144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 154
               

               
Conread position:
               
123-669
               

               
Cow position:
               
chr24:36028222-36027676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
473, 192
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr24:45003718-45003952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
129-416
               

               
Cow position:
               
chr24:11426683-11426403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
129-462
               

               
Cow position:
               
chr24:21887929-21888249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 91
               

               
Conread position:
               
129-609
               

               
Cow position:
               
chr24:40036655-40036175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr24:40120798-40120549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
131-669
               

               
Cow position:
               
chr24:33640195-33639659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 23
               

               
Conread position:
               
134-654
               

               
Cow position:
               
chr24:36268501-36267982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 135
               

               
Conread position:
               
135-668
               

               
Cow position:
               
chr24:6068038-6067509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 134
               

               
Conread position:
               
137-667
               

               
Cow position:
               
chr24:16056557-16056032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
138-665
               

               
Cow position:
               
chr24:17310121-17309594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 207
               

               
Conread position:
               
140-563
               

               
Cow position:
               
chr24:31356906-31357317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
155-667
               

               
Cow position:
               
chr24:30765647-30766144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
157-668
               

               
Cow position:
               
chr24:32359809-32359308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 61
               

               
Conread position:
               
157-669
               

               
Cow position:
               
chr24:34760834-34761346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 164
               

               
Conread position:
               
158-661
               

               
Cow position:
               
chr24:27761394-27761885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
160-438
               

               
Cow position:
               
chr24:17544614-17544337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 155
               

               
Conread position:
               
163-646
               

               
Cow position:
               
chr24:30681800-30681318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 152
               

               
Conread position:
               
163-668
               

               
Cow position:
               
chr24:29064636-29064136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
163-669
               

               
Cow position:
               
chr24:18741036-18740530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 152
               

               
Conread position:
               
164-669
               

               
Cow position:
               
chr24:32759777-32759281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 26
               

               
Conread position:
               
166-665
               

               
Cow position:
               
chr24:28688750-28689232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
168-669
               

               
Cow position:
               
chr24:39482509-39483010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 58
               

               
Conread position:
               
173-669
               

               
Cow position:
               
chr24:11081437-11080944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 140
               

               
Conread position:
               
173-669
               

               
Cow position:
               
chr24:12446837-12447330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 140
               

               
Conread position:
               
176-669
               

               
Cow position:
               
chr24:6271463-6271950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
179-434
               

               
Cow position:
               
chr24:10852915-10852658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
180-669
               

               
Cow position:
               
chr24:10035693-10035205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 5
               

               
Conread position:
               
182-669
               

               
Cow position:
               
chr24:15793665-15793177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 133
               

               
Conread position:
               
187-668
               

               
Cow position:
               
chr24:11940118-11940600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 128
               

               
Conread position:
               
195-384
               

               
Cow position:
               
chr24:45217064-45216877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
195-471
               

               
Cow position:
               
chr24:27762608-27762884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
195-636
               

               
Cow position:
               
chr24:40259034-40258600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
194, 93
               

               
Conread position:
               
198-497
               

               
Cow position:
               
chr24:36478431-36478132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr24:23491487-23491846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
199-669
               

               
Cow position:
               
chr24:6340072-6340541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 141
               

               
Conread position:
               
200-567
               

               
Cow position:
               
chr24:21999069-21998704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
240, 74
               

               
Conread position:
               
200-669
               

               
Cow position:
               
chr24:2073973-2074446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
200-669
               

               
Cow position:
               
chr24:5652917-5652457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 115
               

               
Conread position:
               
200-669
               

               
Cow position:
               
chr24:27345528-27345057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
201-629
               

               
Cow position:
               
chr24:7576449-7576031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 55
               

               
Conread position:
               
202-668
               

               
Cow position:
               
chr24:17752873-17752414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 7
               

               
Conread position:
               
204-668
               

               
Cow position:
               
chr24:33053645-33053175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
211-532
               

               
Cow position:
               
chr24:24485554-24485241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
271, 104
               

               
Conread position:
               
211-669
               

               
Cow position:
               
chr24:12377734-12377278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
211-669
               

               
Cow position:
               
chr24:41200099-41200522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
214-658
               

               
Cow position:
               
chr24:14308165-14308615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
215-669
               

               
Cow position:
               
chr24:37434832-37434390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
218-669
               

               
Cow position:
               
chr24:144966-144515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 97
               

               
Conread position:
               
218-669
               

               
Cow position:
               
chr24:25424078-25424517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 42
               

               
Conread position:
               
218-669
               

               
Cow position:
               
chr24:40253024-40253469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
219-669
               

               
Cow position:
               
chr24:25677100-25677535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 96
               

               
Conread position:
               
220-586
               

               
Cow position:
               
chr24:40896851-40896483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
234-506
               

               
Cow position:
               
chr24:39902148-39901877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
235-669
               

               
Cow position:
               
chr24:26794821-26795255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 80
               

               
Conread position:
               
237-669
               

               
Cow position:
               
chr24:5608413-5607976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
237-669
               

               
Cow position:
               
chr24:19706645-19707061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
243-402
               

               
Cow position:
               
chr24:2263352-2263510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
244-562
               

               
Cow position:
               
chr24:25264286-25264601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
244-579
               

               
Cow position:
               
chr24:33575676-33576008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
150, 71
               

               
Conread position:
               
249-418
               

               
Cow position:
               
chr24:30018722-30018557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
250-529
               

               
Cow position:
               
chr24:10553889-10553600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
250-562
               

               
Cow position:
               
chr24:15880558-15880865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
250-669
               

               
Cow position:
               
chr24:35872802-35872419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
251-669
               

               
Cow position:
               
chr24:31370867-31370455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 64
               

               
Conread position:
               
255-668
               

               
Cow position:
               
chr24:37081286-37080879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
256-668
               

               
Cow position:
               
chr24:25110675-25111083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
260-669
               

               
Cow position:
               
chr24:38487693-38488098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 57
               

               
Conread position:
               
261-669
               

               
Cow position:
               
chr24:15084010-15084418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 56
               

               
Conread position:
               
265-667
               

               
Cow position:
               
chr24:40445103-40445478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
337, 31
               

               
Conread position:
               
265-669
               

               
Cow position:
               
chr24:7031055-7030641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
268-565
               

               
Cow position:
               
chr24:41487312-41487601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
268-594
               

               
Cow position:
               
chr24:40129075-40129406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 50
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr24:4399438-4399181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
269-548
               

               
Cow position:
               
chr24:4721410-4721134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
269-669
               

               
Cow position:
               
chr24:33239440-33239044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 50
               

               
Conread position:
               
273-523
               

               
Cow position:
               
chr24:21094829-21094580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
281-526
               

               
Cow position:
               
chr24:40381183-40380944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
283-669
               

               
Cow position:
               
chr24:25543743-25543373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 31
               

               
Conread position:
               
289-668
               

               
Cow position:
               
chr24:17411876-17412253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
310-560
               

               
Cow position:
               
chr24:11006134-11006380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
237, 9
               

               
Conread position:
               
315-643
               

               
Cow position:
               
chr24:11839338-11839665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
327-669
               

               
Cow position:
               
chr24:13542692-13542349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 0
               
Show alignments to all cow chromosomes.