Cow genome map

Conread name: Lym2-sn63_D07.f

Conread position: 74-272
Cow position: chr3:36571224-36571418 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 74-515
Cow position: chr3:29130178-29130612 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 74-669
Cow position: chr3:49387734-49388330 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 74-669
Cow position: chr3:52150203-52149607 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 87-365
Cow position: chr3:74848075-74847808 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 88-669
Cow position: chr3:14279783-14280353 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 97

Conread position: 91-669
Cow position: chr3:44926913-44927491 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 228

Conread position: 105-370
Cow position: chr3:48240366-48240629 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 77, 207

Conread position: 105-661
Cow position: chr3:3885085-3884525 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 84

Conread position: 105-669
Cow position: chr3:14680201-14680759 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 115

Conread position: 106-259
Cow position: chr3:32211170-32211020 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 106-315
Cow position: chr3:1033977-1034186 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 106-372
Cow position: chr3:1739758-1739493 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 209, 0

Conread position: 106-417
Cow position: chr3:26532889-26532582 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 106-438
Cow position: chr3:53787963-53788294 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 209

Conread position: 106-466
Cow position: chr3:12665252-12665611 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-533
Cow position: chr3:822975-822549 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-553
Cow position: chr3:12676527-12676078 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 76

Conread position: 106-562
Cow position: chr3:6529107-6529562 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-592
Cow position: chr3:4039817-4039336 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 111

Conread position: 106-665
Cow position: chr3:26566889-26567448 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 106-666
Cow position: chr3:47272764-47272204 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:579289-579857 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 124

Conread position: 106-669
Cow position: chr3:2572642-2573205 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:2834424-2833861 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:7155692-7155129 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 208

Conread position: 106-669
Cow position: chr3:14212505-14213068 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:15416581-15417144 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:18862555-18863115 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:26742758-26742199 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:35043274-35043837 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:41019199-41018633 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 212

Conread position: 106-669
Cow position: chr3:49605327-49604769 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:56297499-56298062 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:64171361-64171905 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 106-669
Cow position: chr3:65473545-65474105 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 45

Conread position: 106-669
Cow position: chr3:75772020-75771457 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr3:76864546-76865109 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 107-399
Cow position: chr3:29582225-29582514 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 91

Conread position: 107-497
Cow position: chr3:63736504-63736888 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 200, 51

Conread position: 108-381
Cow position: chr3:38862841-38863107 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 109

Conread position: 108-384
Cow position: chr3:19947325-19947591 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 108-574
Cow position: chr3:26660843-26660390 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 94

Conread position: 108-666
Cow position: chr3:597225-597795 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 20

Conread position: 108-667
Cow position: chr3:84198898-84199445 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 122

Conread position: 108-668
Cow position: chr3:33469541-33468989 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 49

Conread position: 108-669
Cow position: chr3:25056810-25057341 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 54

Conread position: 108-669
Cow position: chr3:49463443-49462893 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 217

Conread position: 109-222
Cow position: chr3:53674103-53673990 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-224
Cow position: chr3:14054391-14054505 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 109-246
Cow position: chr3:2921375-2921512 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-264
Cow position: chr3:6714125-6714281 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 109-273
Cow position: chr3:34027757-34027593 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-276
Cow position: chr3:36402942-36403109 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 86

Conread position: 109-288
Cow position: chr3:33691932-33691753 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-293
Cow position: chr3:7481384-7481205 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 140, 90

Conread position: 109-293
Cow position: chr3:19798034-19797851 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 142, 0

Conread position: 109-293
Cow position: chr3:22339026-22339208 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 109-293
Cow position: chr3:37280513-37280697 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 109-293
Cow position: chr3:57996676-57996860 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 109-297
Cow position: chr3:51547877-51548065 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 109-306
Cow position: chr3:39856581-39856778 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 109-306
Cow position: chr3:44101170-44101368 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 193, 0

Conread position: 109-316
Cow position: chr3:63238912-63238711 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 109-316
Cow position: chr3:69962729-69962521 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 72, 45

Conread position: 109-317
Cow position: chr3:4191819-4191611 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 109-317
Cow position: chr3:31121019-31120811 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 109-319
Cow position: chr3:32412368-32412158 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 109-349
Cow position: chr3:2432535-2432298 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 168, 0

Conread position: 109-349
Cow position: chr3:10412364-10412603 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 225, 206

Conread position: 109-354
Cow position: chr3:68510218-68509977 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 124

Conread position: 109-363
Cow position: chr3:21004930-21005186 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 177, 41

Conread position: 109-372
Cow position: chr3:35342768-35343030 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 0

Conread position: 109-376
Cow position: chr3:34116254-34115980 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 171, 214

Conread position: 109-380
Cow position: chr3:30622992-30623262 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-383
Cow position: chr3:32490595-32490322 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-384
Cow position: chr3:49134419-49134145 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 206, 0

Conread position: 109-385
Cow position: chr3:29574008-29573735 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 109-385
Cow position: chr3:42977472-42977200 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 109-385
Cow position: chr3:68273958-68274233 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-391
Cow position: chr3:33269349-33269622 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 109-401
Cow position: chr3:32768908-32769190 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 267, 133

Conread position: 109-409
Cow position: chr3:80872050-80872348 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 109-429
Cow position: chr3:27245572-27245254 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 221, 49

Conread position: 109-442
Cow position: chr3:31396491-31396817 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 109-452
Cow position: chr3:73636998-73637339 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 109-455
Cow position: chr3:49930953-49931298 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-457
Cow position: chr3:19794974-19794632 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-457
Cow position: chr3:46858166-46857819 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-457
Cow position: chr3:64875891-64876237 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 100

Conread position: 109-460
Cow position: chr3:54087248-54086918 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 87, 95

Conread position: 109-462
Cow position: chr3:11384436-11384779 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 36

Conread position: 109-462
Cow position: chr3:61173613-61173960 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 52

Conread position: 109-471
Cow position: chr3:38496914-38497279 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 249, 54

Conread position: 109-499
Cow position: chr3:24573049-24572662 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 206

Conread position: 109-500
Cow position: chr3:77426811-77427175 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 109-506
Cow position: chr3:3653169-3652793 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 109-506
Cow position: chr3:40826516-40826910 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 109-506
Cow position: chr3:57742631-57743023 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 38

Conread position: 109-506
Cow position: chr3:81101196-81101592 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-509
Cow position: chr3:72669444-72669044 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 208

Conread position: 109-517
Cow position: chr3:49999254-49999660 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 107

Conread position: 109-522
Cow position: chr3:13723594-13723182 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-522
Cow position: chr3:35619675-35620091 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 64

Conread position: 109-526
Cow position: chr3:74403043-74403458 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 263
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 70

Conread position: 109-536
Cow position: chr3:73416115-73416542 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 207

Conread position: 109-554
Cow position: chr3:6854509-6854041 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 332

Conread position: 109-555
Cow position: chr3:5951498-5951063 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 109-555
Cow position: chr3:69208115-69207674 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 293
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 75

Conread position: 109-559
Cow position: chr3:40337028-40336579 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-560
Cow position: chr3:944809-945262 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 207

Conread position: 109-560
Cow position: chr3:3552440-3552879 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 101

Conread position: 109-560
Cow position: chr3:34015529-34015979 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-560
Cow position: chr3:58129208-58129653 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 207

Conread position: 109-585
Cow position: chr3:22352735-22353206 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 81

Conread position: 109-589
Cow position: chr3:47986557-47987036 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-594
Cow position: chr3:35056099-35056563 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 45

Conread position: 109-607
Cow position: chr3:64653786-64654283 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-613
Cow position: chr3:55245661-55246165 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-630
Cow position: chr3:45675660-45675139 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-634
Cow position: chr3:54788195-54788728 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 157

Conread position: 109-641
Cow position: chr3:61677655-61678183 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 36

Conread position: 109-655
Cow position: chr3:6785435-6785977 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 168

Conread position: 109-658
Cow position: chr3:5887004-5887543 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 109-661
Cow position: chr3:57456076-57456618 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 109

Conread position: 109-665
Cow position: chr3:5474657-5475213 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-665
Cow position: chr3:32220841-32221382 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 84

Conread position: 109-665
Cow position: chr3:36121293-36121849 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-665
Cow position: chr3:36416857-36417413 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-665
Cow position: chr3:37628009-37628556 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 57

Conread position: 109-665
Cow position: chr3:45184867-45184328 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 72

Conread position: 109-665
Cow position: chr3:56148410-56148962 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 209

Conread position: 109-666
Cow position: chr3:13276164-13275603 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 210

Conread position: 109-666
Cow position: chr3:22724653-22724111 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 19

Conread position: 109-666
Cow position: chr3:23204556-23203998 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 10

Conread position: 109-666
Cow position: chr3:23287217-23286677 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 36

Conread position: 109-666
Cow position: chr3:36874943-36874387 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr3:38096017-38096575 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 206

Conread position: 109-666
Cow position: chr3:45977620-45978174 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 45

Conread position: 109-666
Cow position: chr3:49416729-49416177 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-666
Cow position: chr3:53518920-53519454 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 207

Conread position: 109-666
Cow position: chr3:54654057-54653485 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 205

Conread position: 109-666
Cow position: chr3:57481619-57481083 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 109-666
Cow position: chr3:59864600-59865154 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-666
Cow position: chr3:76000843-76000290 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 45

Conread position: 109-668
Cow position: chr3:13248902-13248344 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 119

Conread position: 109-668
Cow position: chr3:18353253-18352686 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 109

Conread position: 109-668
Cow position: chr3:33125137-33124582 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-668
Cow position: chr3:35918682-35919236 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 80

Conread position: 109-668
Cow position: chr3:46752964-46753517 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 206

Conread position: 109-668
Cow position: chr3:51254518-51255074 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 137

Conread position: 109-668
Cow position: chr3:60185053-60184494 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 24

Conread position: 109-668
Cow position: chr3:64317868-64318402 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 18

Conread position: 109-668
Cow position: chr3:64376593-64376043 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 208

Conread position: 109-669
Cow position: chr3:302349-302899 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 60

Conread position: 109-669
Cow position: chr3:2117564-2118130 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 186

Conread position: 109-669
Cow position: chr3:2707751-2707197 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 45

Conread position: 109-669
Cow position: chr3:2852119-2851560 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 63

Conread position: 109-669
Cow position: chr3:2866537-2865977 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 206

Conread position: 109-669
Cow position: chr3:3300760-3301302 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 121

Conread position: 109-669
Cow position: chr3:3837475-3836930 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 42

Conread position: 109-669
Cow position: chr3:6442186-6442744 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 109-669
Cow position: chr3:6838147-6838710 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 206

Conread position: 109-669
Cow position: chr3:7245986-7245431 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-669
Cow position: chr3:7476802-7476222 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 88

Conread position: 109-669
Cow position: chr3:10243777-10244337 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-669
Cow position: chr3:11417664-11418224 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:13035378-13034818 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:14438866-14438311 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-669
Cow position: chr3:14864002-14864556 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 502, 45

Conread position: 109-669
Cow position: chr3:18814624-18815171 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 112

Conread position: 109-669
Cow position: chr3:19881167-19881727 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:19883588-19884131 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr3:19942010-19942560 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 76

Conread position: 109-669
Cow position: chr3:20379599-20379042 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 82

Conread position: 109-669
Cow position: chr3:20475632-20476176 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 73

Conread position: 109-669
Cow position: chr3:20795411-20795970 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 210

Conread position: 109-669
Cow position: chr3:21179141-21178579 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 109-669
Cow position: chr3:21593402-21593959 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 107

Conread position: 109-669
Cow position: chr3:21779660-21779100 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:23010471-23011029 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 21

Conread position: 109-669
Cow position: chr3:23217206-23216656 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 18

Conread position: 109-669
Cow position: chr3:24265316-24265875 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:24275687-24276230 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 109-669
Cow position: chr3:24351811-24352355 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 109-669
Cow position: chr3:24442985-24442429 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:26722694-26722142 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:26891608-26892168 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:28435581-28435030 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:30321375-30321918 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 109-669
Cow position: chr3:30615819-30615264 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 39

Conread position: 109-669
Cow position: chr3:31021800-31022350 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 107

Conread position: 109-669
Cow position: chr3:31423009-31422448 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 211

Conread position: 109-669
Cow position: chr3:34504005-34503461 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 90

Conread position: 109-669
Cow position: chr3:35109344-35109904 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 206

Conread position: 109-669
Cow position: chr3:36861982-36861429 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 26

Conread position: 109-669
Cow position: chr3:37893949-37894511 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:38869685-38870243 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 60

Conread position: 109-669
Cow position: chr3:40049007-40049563 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 107

Conread position: 109-669
Cow position: chr3:40520822-40520262 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:41207448-41206888 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr3:42186587-42187146 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr3:42508091-42507536 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 119

Conread position: 109-669
Cow position: chr3:42846464-42847021 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 24

Conread position: 109-669
Cow position: chr3:43084361-43084895 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 119

Conread position: 109-669
Cow position: chr3:43190152-43189589 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 210

Conread position: 109-669
Cow position: chr3:43525621-43525062 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 142

Conread position: 109-669
Cow position: chr3:46682951-46683511 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr3:47078495-47077935 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:48272899-48273462 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 107

Conread position: 109-669
Cow position: chr3:48603370-48603933 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 347

Conread position: 109-669
Cow position: chr3:49564134-49564694 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:50204683-50205250 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 112

Conread position: 109-669
Cow position: chr3:50921157-50921704 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 142

Conread position: 109-669
Cow position: chr3:53880149-53879588 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr3:56485142-56484577 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 206

Conread position: 109-669
Cow position: chr3:56696966-56697515 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 97

Conread position: 109-669
Cow position: chr3:58950579-58951135 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 171

Conread position: 109-669
Cow position: chr3:59602919-59603478 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:64024914-64024364 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 111

Conread position: 109-669
Cow position: chr3:65085052-65085611 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 151

Conread position: 109-669
Cow position: chr3:65989038-65989583 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 160

Conread position: 109-669
Cow position: chr3:66888078-66887515 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 45

Conread position: 109-669
Cow position: chr3:66968761-66968201 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 107

Conread position: 109-669
Cow position: chr3:68696847-68696297 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 60

Conread position: 109-669
Cow position: chr3:68870632-68870077 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr3:72175188-72174621 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 206

Conread position: 109-669
Cow position: chr3:72633191-72633749 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 182

Conread position: 109-669
Cow position: chr3:73451196-73450635 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 206

Conread position: 109-669
Cow position: chr3:74060587-74061145 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:75038724-75038164 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:75997771-75997219 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr3:77697336-77696821 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 109-669
Cow position: chr3:78024318-78023770 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:78520165-78520723 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr3:79668228-79668788 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr3:83289835-83289272 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 137

Conread position: 110-367
Cow position: chr3:13117934-13117687 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 110-370
Cow position: chr3:2790870-2791125 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 0

Conread position: 110-425
Cow position: chr3:76187658-76187981 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 41

Conread position: 110-571
Cow position: chr3:77448106-77448552 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 50

Conread position: 110-591
Cow position: chr3:79595753-79596214 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 110-668
Cow position: chr3:31748798-31749342 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 59

Conread position: 110-668
Cow position: chr3:38251963-38252489 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 35

Conread position: 110-668
Cow position: chr3:68717591-68717035 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 203

Conread position: 110-669
Cow position: chr3:6688946-6689505 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 206

Conread position: 110-669
Cow position: chr3:49732677-49732101 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 150

Conread position: 110-669
Cow position: chr3:64655329-64655882 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 120

Conread position: 111-669
Cow position: chr3:82931743-82932299 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 112-669
Cow position: chr3:15656190-15655642 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 73

Conread position: 113-294
Cow position: chr3:40285194-40285016 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 113-532
Cow position: chr3:6864782-6865189 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 113-559
Cow position: chr3:2365776-2365350 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 113-559
Cow position: chr3:33254736-33254297 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 113-577
Cow position: chr3:69271723-69272186 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 113-666
Cow position: chr3:226764-226217 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 80

Conread position: 113-666
Cow position: chr3:46505890-46506446 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 113-666
Cow position: chr3:66829817-66829276 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 164

Conread position: 113-667
Cow position: chr3:23497636-23497075 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 195

Conread position: 113-668
Cow position: chr3:49907911-49907358 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 202

Conread position: 113-669
Cow position: chr3:2074904-2075458 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 66

Conread position: 113-669
Cow position: chr3:16225998-16226552 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 15

Conread position: 113-669
Cow position: chr3:24638533-24639086 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 113-669
Cow position: chr3:30351397-30351961 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 202

Conread position: 113-669
Cow position: chr3:37972156-37972704 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 130

Conread position: 113-669
Cow position: chr3:49611086-49610538 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 203

Conread position: 113-669
Cow position: chr3:65536236-65536792 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 202

Conread position: 113-669
Cow position: chr3:68889450-68888895 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 147

Conread position: 114-396
Cow position: chr3:34464490-34464768 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 275, 166

Conread position: 114-640
Cow position: chr3:45311914-45312442 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 64

Conread position: 114-669
Cow position: chr3:19108680-19109238 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 200

Conread position: 114-669
Cow position: chr3:55374208-55374742 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 31

Conread position: 115-669
Cow position: chr3:40101726-40101190 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 18

Conread position: 115-669
Cow position: chr3:41057087-41057637 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 13

Conread position: 116-669
Cow position: chr3:27866786-27867332 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 116-669
Cow position: chr3:58766268-58766806 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 74

Conread position: 116-669
Cow position: chr3:63688786-63688253 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 56

Conread position: 117-352
Cow position: chr3:66736446-66736213 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 169

Conread position: 117-425
Cow position: chr3:27454807-27454505 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 0

Conread position: 117-459
Cow position: chr3:39327674-39328005 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 25

Conread position: 117-487
Cow position: chr3:15988065-15988431 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 117-524
Cow position: chr3:42424368-42423971 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 25

Conread position: 117-661
Cow position: chr3:53047667-53047130 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 199

Conread position: 117-667
Cow position: chr3:70914137-70913587 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 87

Conread position: 117-668
Cow position: chr3:13886250-13886793 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 358
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 38

Conread position: 117-668
Cow position: chr3:42602782-42603330 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 64

Conread position: 117-669
Cow position: chr3:6896954-6897504 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 11

Conread position: 117-669
Cow position: chr3:11784491-11785028 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 10

Conread position: 117-669
Cow position: chr3:14284861-14285406 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 38

Conread position: 117-669
Cow position: chr3:15663318-15662789 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 86

Conread position: 117-669
Cow position: chr3:33633893-33633367 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 68

Conread position: 117-669
Cow position: chr3:44536862-44536299 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 285

Conread position: 118-396
Cow position: chr3:49429627-49429366 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 118-669
Cow position: chr3:13311876-13311321 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 10

Conread position: 118-669
Cow position: chr3:22235372-22234814 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 119-416
Cow position: chr3:8605778-8605490 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 119-425
Cow position: chr3:75164940-75164644 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 127, 50

Conread position: 119-444
Cow position: chr3:600841-601149 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 71

Conread position: 119-505
Cow position: chr3:18886587-18886970 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 35

Conread position: 119-506
Cow position: chr3:35854454-35854057 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 209

Conread position: 119-525
Cow position: chr3:37451228-37451616 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 146, 197

Conread position: 119-532
Cow position: chr3:36671492-36671078 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 202

Conread position: 119-560
Cow position: chr3:16293781-16293348 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 35

Conread position: 119-617
Cow position: chr3:26993254-26993747 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 71

Conread position: 119-630
Cow position: chr3:27091063-27090561 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 125

Conread position: 119-634
Cow position: chr3:54863494-54862981 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 119-638
Cow position: chr3:12673247-12672752 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 60

Conread position: 119-660
Cow position: chr3:65582068-65581540 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 370

Conread position: 119-661
Cow position: chr3:66977797-66978334 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 29

Conread position: 119-662
Cow position: chr3:34557242-34556719 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 91

Conread position: 119-667
Cow position: chr3:7677621-7678170 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 29

Conread position: 119-667
Cow position: chr3:62793945-62793413 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 75

Conread position: 119-668
Cow position: chr3:3031364-3031908 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 119-668
Cow position: chr3:37983238-37982689 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 196

Conread position: 119-668
Cow position: chr3:48362065-48362596 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 132

Conread position: 119-668
Cow position: chr3:49336323-49336863 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 66

Conread position: 119-668
Cow position: chr3:52651813-52651279 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 71

Conread position: 119-669
Cow position: chr3:12750027-12750563 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 118

Conread position: 119-669
Cow position: chr3:18759294-18758734 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 210

Conread position: 119-669
Cow position: chr3:23170081-23169561 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 62

Conread position: 119-669
Cow position: chr3:25689785-25690304 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 119-669
Cow position: chr3:30938624-30939174 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 71

Conread position: 119-669
Cow position: chr3:31224406-31224964 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 97

Conread position: 119-669
Cow position: chr3:35884993-35884444 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 196

Conread position: 119-669
Cow position: chr3:56160687-56160149 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 26

Conread position: 119-669
Cow position: chr3:59332709-59333236 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 202

Conread position: 120-669
Cow position: chr3:31418665-31419204 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 40

Conread position: 121-597
Cow position: chr3:4017636-4018115 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 40

Conread position: 121-668
Cow position: chr3:24586101-24585551 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 194

Conread position: 121-669
Cow position: chr3:56645201-56644653 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 194

Conread position: 122-409
Cow position: chr3:70215302-70215588 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 122-528
Cow position: chr3:10371507-10371901 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 122-668
Cow position: chr3:13353000-13352447 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 122-668
Cow position: chr3:16657738-16657179 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 81

Conread position: 122-668
Cow position: chr3:42993746-42993199 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 346
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 199

Conread position: 122-669
Cow position: chr3:27547318-27546758 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 163

Conread position: 122-669
Cow position: chr3:34393156-34392607 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 94

Conread position: 123-282
Cow position: chr3:2366434-2366275 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 123-506
Cow position: chr3:7856554-7856935 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 123-585
Cow position: chr3:173636-174090 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 73

Conread position: 123-667
Cow position: chr3:36170806-36170292 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 123-668
Cow position: chr3:31934207-31933669 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 199

Conread position: 125-669
Cow position: chr3:24432515-24433054 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 190

Conread position: 128-427
Cow position: chr3:14028122-14028420 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 128-456
Cow position: chr3:64282179-64281861 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 54

Conread position: 128-506
Cow position: chr3:20999935-20999558 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 187

Conread position: 128-667
Cow position: chr3:56099873-56099336 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 128-669
Cow position: chr3:4030880-4031425 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 57

Conread position: 128-669
Cow position: chr3:14922789-14923329 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 128-669
Cow position: chr3:19753598-19753058 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 129-416
Cow position: chr3:50346953-50347230 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 205, 56

Conread position: 129-496
Cow position: chr3:56102877-56103240 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 91

Conread position: 129-661
Cow position: chr3:29391984-29391447 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 91

Conread position: 129-669
Cow position: chr3:22272538-22272015 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 17

Conread position: 130-504
Cow position: chr3:46006241-46006600 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 11, 56

Conread position: 131-399
Cow position: chr3:63148502-63148234 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 184

Conread position: 131-666
Cow position: chr3:52689892-52690398 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 29

Conread position: 134-458
Cow position: chr3:28471496-28471815 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 134-535
Cow position: chr3:55454920-55454511 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 276
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 52

Conread position: 134-668
Cow position: chr3:52726132-52725597 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 51

Conread position: 134-668
Cow position: chr3:55461514-55460993 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 51

Conread position: 134-669
Cow position: chr3:83767388-83767922 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 181

Conread position: 135-534
Cow position: chr3:14724263-14724647 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 135-669
Cow position: chr3:39921801-39921270 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 50

Conread position: 136-669
Cow position: chr3:51235347-51234827 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 75

Conread position: 137-666
Cow position: chr3:49542069-49541534 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 180

Conread position: 137-667
Cow position: chr3:63219080-63219600 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 168

Conread position: 137-669
Cow position: chr3:51314223-51314731 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 25

Conread position: 138-508
Cow position: chr3:68344187-68343840 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 193, 16

Conread position: 138-621
Cow position: chr3:20781302-20780831 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 52

Conread position: 140-586
Cow position: chr3:25753403-25753856 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 71

Conread position: 140-668
Cow position: chr3:45691893-45691382 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 91

Conread position: 143-633
Cow position: chr3:40205555-40206044 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 172

Conread position: 143-669
Cow position: chr3:35612298-35612820 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 172

Conread position: 144-647
Cow position: chr3:72390071-72390574 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 113

Conread position: 145-667
Cow position: chr3:22220296-22220811 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 9

Conread position: 145-668
Cow position: chr3:17937858-17937341 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 30

Conread position: 147-499
Cow position: chr3:73305337-73305680 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 38

Conread position: 148-669
Cow position: chr3:14613189-14613695 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 112

Conread position: 148-669
Cow position: chr3:68500616-68501135 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 167

Conread position: 157-668
Cow position: chr3:12797896-12797385 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 158

Conread position: 157-669
Cow position: chr3:60932433-60932941 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 157-669
Cow position: chr3:76136484-76137003 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 161

Conread position: 159-669
Cow position: chr3:59118611-59118101 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 156

Conread position: 160-669
Cow position: chr3:17864598-17865106 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 163-331
Cow position: chr3:61199844-61200011 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 152, 0

Conread position: 163-669
Cow position: chr3:12931938-12932444 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 152

Conread position: 163-669
Cow position: chr3:16620584-16620077 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 152

Conread position: 163-669
Cow position: chr3:24455359-24454876 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 163-669
Cow position: chr3:67745610-67745101 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 164-452
Cow position: chr3:68043332-68043045 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 92

Conread position: 165-665
Cow position: chr3:28765238-28764749 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 150

Conread position: 165-669
Cow position: chr3:39231885-39232389 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 150

Conread position: 168-562
Cow position: chr3:6024682-6024289 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 168-665
Cow position: chr3:73763454-73762963 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 42

Conread position: 169-668
Cow position: chr3:4135804-4135303 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 146

Conread position: 169-669
Cow position: chr3:49976349-49975852 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 146

Conread position: 171-452
Cow position: chr3:36594878-36595158 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 144, 0

Conread position: 172-665
Cow position: chr3:74391725-74391235 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 68

Conread position: 172-669
Cow position: chr3:30752764-30753260 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 143

Conread position: 173-669
Cow position: chr3:77472807-77472323 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 142

Conread position: 179-495
Cow position: chr3:20074275-20074590 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 179-654
Cow position: chr3:61538793-61539262 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 183-669
Cow position: chr3:54876855-54877318 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 132

Conread position: 185-669
Cow position: chr3:39878984-39878505 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 186-559
Cow position: chr3:73811270-73811650 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 141, 14

Conread position: 187-669
Cow position: chr3:19958790-19959272 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 128

Conread position: 191-665
Cow position: chr3:58336506-58336980 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 124

Conread position: 193-669
Cow position: chr3:29281961-29282431 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 122

Conread position: 196-426
Cow position: chr3:28669582-28669360 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 85

Conread position: 196-669
Cow position: chr3:21082077-21082536 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 50

Conread position: 198-540
Cow position: chr3:16869201-16868859 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 119

Conread position: 198-618
Cow position: chr3:9289816-9290229 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 398, 20

Conread position: 198-669
Cow position: chr3:9404043-9403579 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 33

Conread position: 199-668
Cow position: chr3:51337453-51336976 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 305
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 41

Conread position: 199-669
Cow position: chr3:14452866-14453330 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 71

Conread position: 200-462
Cow position: chr3:71245804-71246072 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 90

Conread position: 200-488
Cow position: chr3:40615946-40615667 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 218, 37

Conread position: 200-669
Cow position: chr3:51256146-51256616 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 0

Conread position: 200-669
Cow position: chr3:57900140-57900615 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 115

Conread position: 201-494
Cow position: chr3:43418856-43419144 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 25

Conread position: 204-601
Cow position: chr3:48528239-48528634 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 27

Conread position: 205-668
Cow position: chr3:63198529-63198969 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 206-500
Cow position: chr3:16635186-16635479 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 52

Conread position: 206-669
Cow position: chr3:22918737-22919197 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 107

Conread position: 206-669
Cow position: chr3:81375041-81374574 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 209-645
Cow position: chr3:11944283-11944721 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 19, 33

Conread position: 210-526
Cow position: chr3:19824848-19824536 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 189, 85

Conread position: 210-662
Cow position: chr3:45880955-45881403 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 210-669
Cow position: chr3:53158593-53159039 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 286
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 5

Conread position: 211-468
Cow position: chr3:18252767-18253018 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 134, 54

Conread position: 211-668
Cow position: chr3:26974419-26973959 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 68

Conread position: 211-669
Cow position: chr3:6170691-6171149 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 104

Conread position: 211-669
Cow position: chr3:18184134-18184584 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 66

Conread position: 211-669
Cow position: chr3:77550172-77550631 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 215-669
Cow position: chr3:50217214-50217666 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 101

Conread position: 216-583
Cow position: chr3:19830932-19830577 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 332, 44

Conread position: 218-631
Cow position: chr3:37040515-37040931 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 99

Conread position: 218-668
Cow position: chr3:52257300-52256843 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 219-506
Cow position: chr3:1831630-1831360 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 63

Conread position: 219-596
Cow position: chr3:59607520-59607886 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 71

Conread position: 219-669
Cow position: chr3:30329441-30328992 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 96

Conread position: 219-669
Cow position: chr3:58953364-58953801 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 220-665
Cow position: chr3:16716607-16716174 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 221-413
Cow position: chr3:15082712-15082526 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 152, 68

Conread position: 221-420
Cow position: chr3:11411819-11411622 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 178, 94

Conread position: 221-661
Cow position: chr3:16332650-16333086 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 69

Conread position: 222-458
Cow position: chr3:46349456-46349699 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 55

Conread position: 226-668
Cow position: chr3:1299313-1299764 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 70

Conread position: 226-669
Cow position: chr3:9639778-9639352 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 29

Conread position: 227-667
Cow position: chr3:49133163-49132747 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 9

Conread position: 228-669
Cow position: chr3:52045783-52045342 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 87

Conread position: 230-660
Cow position: chr3:39970829-39970399 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 33

Conread position: 231-669
Cow position: chr3:48599778-48600213 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 50

Conread position: 231-669
Cow position: chr3:63176587-63177017 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 88

Conread position: 232-483
Cow position: chr3:14053549-14053297 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 143, 83

Conread position: 232-669
Cow position: chr3:45608089-45608524 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 8

Conread position: 237-669
Cow position: chr3:6884390-6884823 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 237-669
Cow position: chr3:21100049-21100480 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 78

Conread position: 238-594
Cow position: chr3:27689715-27690058 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 226, 79

Conread position: 239-669
Cow position: chr3:38747628-38748058 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 76

Conread position: 239-669
Cow position: chr3:77366459-77366036 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 85

Conread position: 241-667
Cow position: chr3:13494834-13495252 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 74

Conread position: 242-669
Cow position: chr3:54608757-54608335 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 30

Conread position: 244-451
Cow position: chr3:52010445-52010239 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 244-517
Cow position: chr3:64277987-64278261 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 181, 52

Conread position: 244-618
Cow position: chr3:80564053-80564425 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 75

Conread position: 245-448
Cow position: chr3:8451658-8451462 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 245-495
Cow position: chr3:14922311-14922550 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 245-507
Cow position: chr3:54778234-54778487 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 245-522
Cow position: chr3:35030524-35030245 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 171

Conread position: 245-546
Cow position: chr3:70250148-70249860 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 245-591
Cow position: chr3:27299285-27298951 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 71

Conread position: 245-666
Cow position: chr3:22512560-22512963 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 185, 11

Conread position: 245-668
Cow position: chr3:56101503-56101916 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 70

Conread position: 245-668
Cow position: chr3:76354706-76355130 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 160, 15

Conread position: 245-669
Cow position: chr3:19797851-19797426 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 70

Conread position: 245-669
Cow position: chr3:25997845-25997431 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 366, 11

Conread position: 245-669
Cow position: chr3:70074850-70074426 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 70

Conread position: 246-669
Cow position: chr3:42050817-42050411 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 43, 31

Conread position: 248-657
Cow position: chr3:58027443-58027020 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 67

Conread position: 250-583
Cow position: chr3:7563345-7563003 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 54

Conread position: 251-666
Cow position: chr3:66623446-66623860 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 64

Conread position: 252-646
Cow position: chr3:11278668-11279057 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 53

Conread position: 253-622
Cow position: chr3:56684997-56685368 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 74, 62

Conread position: 254-665
Cow position: chr3:36403375-36403794 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 61

Conread position: 255-435
Cow position: chr3:32403199-32403378 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 255-669
Cow position: chr3:24886850-24887260 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 256-667
Cow position: chr3:21303323-21302923 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 258-495
Cow position: chr3:12785297-12785061 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 259-669
Cow position: chr3:80741138-80741548 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 56

Conread position: 262-559
Cow position: chr3:67283885-67284179 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 53

Conread position: 262-669
Cow position: chr3:70890716-70891119 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 263-667
Cow position: chr3:40231029-40231436 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 265-604
Cow position: chr3:36571161-36570822 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 56

Conread position: 265-663
Cow position: chr3:39065192-39065579 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 43

Conread position: 267-669
Cow position: chr3:41654816-41655201 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 199, 67

Conread position: 268-668
Cow position: chr3:55190587-55190200 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 65

Conread position: 268-669
Cow position: chr3:28922272-28922673 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 47

Conread position: 268-669
Cow position: chr3:34037245-34037646 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 49

Conread position: 268-669
Cow position: chr3:75158072-75157682 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 53

Conread position: 269-636
Cow position: chr3:6714352-6714719 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 50

Conread position: 269-669
Cow position: chr3:18246305-18245906 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 45

Conread position: 270-457
Cow position: chr3:523488-523669 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 46

Conread position: 270-553
Cow position: chr3:62156875-62157161 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 9

Conread position: 273-612
Cow position: chr3:80582140-80582470 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 292, 23

Conread position: 276-669
Cow position: chr3:43529117-43528728 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 39

Conread position: 278-669
Cow position: chr3:13518028-13517646 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 41

Conread position: 279-535
Cow position: chr3:43232352-43232597 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 281-668
Cow position: chr3:35077536-35077153 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 28

Conread position: 282-457
Cow position: chr3:13115184-13115012 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 110

Conread position: 284-574
Cow position: chr3:82275376-82275088 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 284-669
Cow position: chr3:76924002-76923632 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 290-535
Cow position: chr3:81667679-81667436 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 290-668
Cow position: chr3:13085242-13084866 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 29

Conread position: 296-536
Cow position: chr3:54959037-54959276 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 23

Conread position: 302-492
Cow position: chr3:9591742-9591553 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 17

Conread position: 303-669
Cow position: chr3:38346349-38346714 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 305-668
Cow position: chr3:62611074-62611421 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 307-669
Cow position: chr3:56302490-56302131 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 12

Conread position: 309-506
Cow position: chr3:55187737-55187935 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 10

Conread position: 312-669
Cow position: chr3:45097559-45097917 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 322-669
Cow position: chr3:2431691-2431354 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 66

Conread position: 323-622
Cow position: chr3:66272340-66272632 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 69

Show alignments to all cow chromosomes.