Cow genome map

Conread name: Lym2-sn63_D07.f

Conread position: 55-658
Cow position: chr6:26667917-26667314 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 31

Conread position: 61-669
Cow position: chr6:28135866-28136460 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 190

Conread position: 74-669
Cow position: chr6:127005-126413 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 150

Conread position: 95-669
Cow position: chr6:43087448-43086893 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 59

Conread position: 102-593
Cow position: chr6:3987901-3987409 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 213

Conread position: 106-247
Cow position: chr6:57228751-57228892 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 106-262
Cow position: chr6:9587694-9587850 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 106-313
Cow position: chr6:27151282-27151075 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 106-317
Cow position: chr6:11354019-11353803 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 48

Conread position: 106-450
Cow position: chr6:508363-508019 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 210

Conread position: 106-499
Cow position: chr6:21857206-21856824 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 106-499
Cow position: chr6:31941026-31941418 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-506
Cow position: chr6:65819421-65819024 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 106-541
Cow position: chr6:56451936-56451511 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 209

Conread position: 106-560
Cow position: chr6:39957228-39957683 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 48

Conread position: 106-669
Cow position: chr6:328204-327641 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 210

Conread position: 106-669
Cow position: chr6:11019816-11020380 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 214

Conread position: 106-669
Cow position: chr6:11401479-11402042 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr6:11453709-11453145 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 210

Conread position: 106-669
Cow position: chr6:12663156-12662611 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 106-669
Cow position: chr6:14928618-14929166 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 136

Conread position: 106-669
Cow position: chr6:19103749-19103186 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 207

Conread position: 106-669
Cow position: chr6:21163462-21164025 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr6:33950001-33949443 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 32

Conread position: 106-669
Cow position: chr6:45723986-45723403 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 71

Conread position: 106-669
Cow position: chr6:45975658-45976221 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr6:57521334-57521897 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 106-669
Cow position: chr6:62664934-62665497 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 209

Conread position: 108-669
Cow position: chr6:4274231-4274762 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 107

Conread position: 108-669
Cow position: chr6:42266894-42267438 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 120

Conread position: 108-669
Cow position: chr6:59507386-59507913 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 109-246
Cow position: chr6:20350927-20350790 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-252
Cow position: chr6:43049033-43048890 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-254
Cow position: chr6:4388902-4389048 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 109-259
Cow position: chr6:41408567-41408717 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 60

Conread position: 109-263
Cow position: chr6:2453008-2453162 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 109-266
Cow position: chr6:28399610-28399454 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 109-275
Cow position: chr6:33489892-33489726 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 109-292
Cow position: chr6:58016510-58016694 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 109-300
Cow position: chr6:1507348-1507157 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 109-300
Cow position: chr6:49963790-49963599 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 109-305
Cow position: chr6:11168669-11168864 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 158, 0

Conread position: 109-311
Cow position: chr6:25357699-25357503 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 109-317
Cow position: chr6:68030341-68030549 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 109-331
Cow position: chr6:50485622-50485401 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 206, 0

Conread position: 109-331
Cow position: chr6:51868151-51868370 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 109-337
Cow position: chr6:30269741-30269513 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 79, 207

Conread position: 109-354
Cow position: chr6:27939196-27939439 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-362
Cow position: chr6:7176403-7176154 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 51

Conread position: 109-363
Cow position: chr6:49761632-49761878 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 109-370
Cow position: chr6:43620893-43621153 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-371
Cow position: chr6:52065959-52065698 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-372
Cow position: chr6:36230364-36230102 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-375
Cow position: chr6:33508412-33508673 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 156, 40

Conread position: 109-375
Cow position: chr6:67173717-67173983 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 121

Conread position: 109-384
Cow position: chr6:6944779-6944511 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 202, 10

Conread position: 109-385
Cow position: chr6:17556508-17556236 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 109-386
Cow position: chr6:13314868-13314592 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 191, 92

Conread position: 109-386
Cow position: chr6:61829391-61829667 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-396
Cow position: chr6:15181317-15181605 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 113

Conread position: 109-399
Cow position: chr6:67448764-67448476 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-408
Cow position: chr6:64425954-64426238 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 18

Conread position: 109-409
Cow position: chr6:6557123-6557422 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-426
Cow position: chr6:6034635-6034323 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 109-448
Cow position: chr6:843666-843327 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 207

Conread position: 109-463
Cow position: chr6:1536867-1537220 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-482
Cow position: chr6:32018953-32018570 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 223

Conread position: 109-487
Cow position: chr6:21588146-21588521 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 206

Conread position: 109-489
Cow position: chr6:16703581-16703218 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 173

Conread position: 109-492
Cow position: chr6:31913013-31912631 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-494
Cow position: chr6:16766678-16766296 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 82

Conread position: 109-499
Cow position: chr6:57383578-57383966 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 213

Conread position: 109-501
Cow position: chr6:35600841-35601230 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 116

Conread position: 109-504
Cow position: chr6:43187271-43187669 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 206

Conread position: 109-506
Cow position: chr6:28172073-28172471 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 45

Conread position: 109-506
Cow position: chr6:40863867-40863478 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 109-506
Cow position: chr6:60332505-60332903 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 207

Conread position: 109-506
Cow position: chr6:64719480-64719873 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 109-515
Cow position: chr6:39999295-39998893 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 109-522
Cow position: chr6:28102706-28102297 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 29

Conread position: 109-560
Cow position: chr6:57856932-57857382 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-562
Cow position: chr6:1402395-1401950 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 109-577
Cow position: chr6:2186620-2186153 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-586
Cow position: chr6:33896478-33896018 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 109-592
Cow position: chr6:17386685-17387167 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-592
Cow position: chr6:62961064-62961534 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 87

Conread position: 109-618
Cow position: chr6:50571353-50571862 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-621
Cow position: chr6:53543321-53542811 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-623
Cow position: chr6:48947494-48946976 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 29

Conread position: 109-628
Cow position: chr6:51150104-51150623 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-641
Cow position: chr6:55361633-55361101 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-645
Cow position: chr6:33809272-33808736 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-649
Cow position: chr6:52245671-52246196 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 29

Conread position: 109-655
Cow position: chr6:3485257-3484712 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-655
Cow position: chr6:47154575-47155089 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 353
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 344, 52

Conread position: 109-662
Cow position: chr6:12926735-12927283 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 123

Conread position: 109-662
Cow position: chr6:65909486-65910040 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 64

Conread position: 109-664
Cow position: chr6:33466120-33466672 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 134

Conread position: 109-665
Cow position: chr6:7215957-7216501 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-665
Cow position: chr6:39912486-39913040 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 33

Conread position: 109-665
Cow position: chr6:43797739-43797181 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 202

Conread position: 109-665
Cow position: chr6:45901830-45901275 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr6:182378-181823 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 27

Conread position: 109-666
Cow position: chr6:478712-479265 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-666
Cow position: chr6:706160-706713 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-666
Cow position: chr6:1834157-1834713 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-666
Cow position: chr6:3272319-3271762 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 29

Conread position: 109-666
Cow position: chr6:6182546-6182008 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 61

Conread position: 109-666
Cow position: chr6:8754292-8753739 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 109-666
Cow position: chr6:11289304-11288749 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 66

Conread position: 109-666
Cow position: chr6:15276078-15275522 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 206

Conread position: 109-666
Cow position: chr6:17049535-17050089 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 206

Conread position: 109-666
Cow position: chr6:20553079-20552534 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 100

Conread position: 109-666
Cow position: chr6:24242451-24243004 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-666
Cow position: chr6:34493837-34494387 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 109-666
Cow position: chr6:34504359-34503806 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 205

Conread position: 109-666
Cow position: chr6:34843551-34842965 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 206

Conread position: 109-666
Cow position: chr6:40550538-40549982 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 206

Conread position: 109-666
Cow position: chr6:40813527-40814080 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 109-666
Cow position: chr6:41192488-41193066 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 133

Conread position: 109-666
Cow position: chr6:41231650-41232183 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 163

Conread position: 109-666
Cow position: chr6:47040047-47039492 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 68

Conread position: 109-666
Cow position: chr6:51717717-51718274 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 107

Conread position: 109-666
Cow position: chr6:55386627-55387169 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 63

Conread position: 109-666
Cow position: chr6:55903251-55903808 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 206

Conread position: 109-666
Cow position: chr6:58030939-58031484 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 206

Conread position: 109-667
Cow position: chr6:8205350-8205906 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 64

Conread position: 109-667
Cow position: chr6:44510252-44510813 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 45

Conread position: 109-668
Cow position: chr6:2875869-2875315 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 14

Conread position: 109-668
Cow position: chr6:9738092-9737543 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 171

Conread position: 109-668
Cow position: chr6:28001229-28000675 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 29

Conread position: 109-668
Cow position: chr6:32420112-32420661 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 109

Conread position: 109-668
Cow position: chr6:46633281-46633831 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 130

Conread position: 109-668
Cow position: chr6:55593232-55593785 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:452101-451542 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:888719-889277 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:1274683-1274136 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 45

Conread position: 109-669
Cow position: chr6:1406983-1406431 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr6:1796789-1797347 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 45

Conread position: 109-669
Cow position: chr6:2089438-2089980 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 45

Conread position: 109-669
Cow position: chr6:2111237-2110693 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 112

Conread position: 109-669
Cow position: chr6:2367099-2366573 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 81

Conread position: 109-669
Cow position: chr6:3152380-3152934 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 107

Conread position: 109-669
Cow position: chr6:3886343-3885785 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 206

Conread position: 109-669
Cow position: chr6:4467799-4468336 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 12

Conread position: 109-669
Cow position: chr6:5946613-5946053 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:6471771-6471198 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 45

Conread position: 109-669
Cow position: chr6:6569069-6568512 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:6721132-6721694 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 135

Conread position: 109-669
Cow position: chr6:7467488-7466929 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 134

Conread position: 109-669
Cow position: chr6:9234673-9235234 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 206

Conread position: 109-669
Cow position: chr6:10044377-10044928 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:10598166-10598701 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 120

Conread position: 109-669
Cow position: chr6:11869772-11869214 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 181

Conread position: 109-669
Cow position: chr6:12388292-12387753 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 42

Conread position: 109-669
Cow position: chr6:12997583-12998138 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 122

Conread position: 109-669
Cow position: chr6:13591475-13592036 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 23

Conread position: 109-669
Cow position: chr6:15138011-15137451 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:16410220-16410776 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 36

Conread position: 109-669
Cow position: chr6:16418520-16417969 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:16645058-16645593 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 125

Conread position: 109-669
Cow position: chr6:17112003-17111444 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 151

Conread position: 109-669
Cow position: chr6:17121548-17122111 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 133

Conread position: 109-669
Cow position: chr6:18803897-18803337 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 210

Conread position: 109-669
Cow position: chr6:19044377-19044912 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 47

Conread position: 109-669
Cow position: chr6:19713072-19712523 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 76

Conread position: 109-669
Cow position: chr6:19718747-19719292 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 168

Conread position: 109-669
Cow position: chr6:20451122-20451678 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 163

Conread position: 109-669
Cow position: chr6:21711868-21712428 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:21832498-21831938 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 26

Conread position: 109-669
Cow position: chr6:22043846-22043288 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 110

Conread position: 109-669
Cow position: chr6:22737544-22736984 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:23568431-23567886 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:23879894-23879337 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 168

Conread position: 109-669
Cow position: chr6:25374946-25374386 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:26325037-26324479 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 42

Conread position: 109-669
Cow position: chr6:26771959-26771400 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 107

Conread position: 109-669
Cow position: chr6:27094424-27093865 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 82

Conread position: 109-669
Cow position: chr6:27172991-27173563 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 218

Conread position: 109-669
Cow position: chr6:28065153-28065710 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 109

Conread position: 109-669
Cow position: chr6:28185157-28184599 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:35825210-35825759 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 109-669
Cow position: chr6:35873567-35873013 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 185

Conread position: 109-669
Cow position: chr6:36531435-36531997 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 109-669
Cow position: chr6:37387740-37388288 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 25

Conread position: 109-669
Cow position: chr6:39331369-39330810 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 36

Conread position: 109-669
Cow position: chr6:40251635-40251082 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 36

Conread position: 109-669
Cow position: chr6:44146785-44146229 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 111

Conread position: 109-669
Cow position: chr6:45479926-45479366 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:45937453-45938001 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 45

Conread position: 109-669
Cow position: chr6:46225800-46225243 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 210

Conread position: 109-669
Cow position: chr6:46764240-46763684 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 77

Conread position: 109-669
Cow position: chr6:46947980-46948534 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 116

Conread position: 109-669
Cow position: chr6:51876927-51877476 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 45

Conread position: 109-669
Cow position: chr6:53537238-53537798 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:54472483-54471927 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 109-669
Cow position: chr6:55238852-55239412 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:55539109-55538553 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:59596405-59596977 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 36

Conread position: 109-669
Cow position: chr6:60379325-60379885 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 205

Conread position: 109-669
Cow position: chr6:60876458-60877017 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:63177205-63177765 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 109-669
Cow position: chr6:67553394-67553954 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 206

Conread position: 110-366
Cow position: chr6:59619239-59619495 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 205

Conread position: 110-385
Cow position: chr6:27526800-27526529 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 110-415
Cow position: chr6:47149807-47149501 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 33

Conread position: 110-459
Cow position: chr6:7105365-7105019 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 44

Conread position: 110-484
Cow position: chr6:65875119-65874752 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 21

Conread position: 110-669
Cow position: chr6:7448658-7449217 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 205

Conread position: 110-669
Cow position: chr6:17344363-17344917 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 35

Conread position: 113-338
Cow position: chr6:25180016-25179794 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 221, 69

Conread position: 113-417
Cow position: chr6:53935468-53935173 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 35

Conread position: 113-506
Cow position: chr6:56925899-56926291 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 113-559
Cow position: chr6:10681161-10681594 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 32

Conread position: 113-659
Cow position: chr6:10236362-10236894 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 106

Conread position: 113-665
Cow position: chr6:1263328-1263877 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 129

Conread position: 113-667
Cow position: chr6:44017662-44017108 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 202

Conread position: 113-669
Cow position: chr6:224339-223777 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 104

Conread position: 113-669
Cow position: chr6:7138175-7137620 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 78

Conread position: 113-669
Cow position: chr6:11722042-11721494 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 202

Conread position: 113-669
Cow position: chr6:13308230-13307676 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 53

Conread position: 113-669
Cow position: chr6:28160575-28161131 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 202

Conread position: 114-452
Cow position: chr6:2618399-2618061 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 201

Conread position: 114-669
Cow position: chr6:45666760-45666218 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 14

Conread position: 115-438
Cow position: chr6:52249345-52249018 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 271, 13

Conread position: 115-669
Cow position: chr6:35704346-35703809 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 45

Conread position: 117-396
Cow position: chr6:18987310-18987575 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 269, 29

Conread position: 117-396
Cow position: chr6:44097877-44098153 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 103

Conread position: 117-403
Cow position: chr6:52977988-52977711 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 241, 86

Conread position: 117-433
Cow position: chr6:14144192-14144506 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 169, 32

Conread position: 117-437
Cow position: chr6:4903826-4903512 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 104

Conread position: 117-457
Cow position: chr6:28481500-28481842 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 68

Conread position: 117-488
Cow position: chr6:32286724-32287094 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 117-506
Cow position: chr6:11639036-11638650 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 114

Conread position: 117-658
Cow position: chr6:9322173-9322703 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 92

Conread position: 117-665
Cow position: chr6:27887082-27887639 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 163

Conread position: 117-665
Cow position: chr6:29484152-29484692 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 46

Conread position: 117-669
Cow position: chr6:14950482-14949938 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 143

Conread position: 117-669
Cow position: chr6:51673942-51674487 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 118-586
Cow position: chr6:48881918-48882381 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 118-665
Cow position: chr6:53810761-53811283 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 30

Conread position: 118-669
Cow position: chr6:33300836-33301390 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 200

Conread position: 119-300
Cow position: chr6:66188628-66188447 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 119-317
Cow position: chr6:12099686-12099874 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 119-382
Cow position: chr6:26958928-26959196 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 75

Conread position: 119-404
Cow position: chr6:3573964-3574240 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 84, 65

Conread position: 119-416
Cow position: chr6:14264082-14263789 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 215, 44

Conread position: 119-428
Cow position: chr6:3893470-3893158 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 140

Conread position: 119-466
Cow position: chr6:20268140-20267799 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 119-467
Cow position: chr6:1498370-1498720 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 240

Conread position: 119-499
Cow position: chr6:58595234-58594855 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 272, 121

Conread position: 119-511
Cow position: chr6:43778878-43779253 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 12

Conread position: 119-568
Cow position: chr6:60167386-60166958 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 124, 89

Conread position: 119-591
Cow position: chr6:34405473-34405970 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 119-620
Cow position: chr6:52240658-52240158 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 66

Conread position: 119-649
Cow position: chr6:15480743-15481263 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 50

Conread position: 119-665
Cow position: chr6:16050120-16049578 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 16

Conread position: 119-667
Cow position: chr6:53672507-53673061 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 63

Conread position: 119-668
Cow position: chr6:39136676-39137212 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 162

Conread position: 119-668
Cow position: chr6:46283926-46283385 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 119-669
Cow position: chr6:10570715-10570186 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 54

Conread position: 119-669
Cow position: chr6:14290338-14289800 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 112

Conread position: 119-669
Cow position: chr6:18912562-18912012 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 196

Conread position: 119-669
Cow position: chr6:24623968-24623424 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 62

Conread position: 119-669
Cow position: chr6:34075040-34075598 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 29

Conread position: 119-669
Cow position: chr6:40278231-40278774 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 123

Conread position: 119-669
Cow position: chr6:51733253-51733803 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 196

Conread position: 120-311
Cow position: chr6:52900119-52900310 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 91

Conread position: 120-669
Cow position: chr6:47171241-47171769 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 18

Conread position: 121-370
Cow position: chr6:65049497-65049264 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 121-445
Cow position: chr6:10612001-10612322 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 130

Conread position: 121-621
Cow position: chr6:10650619-10650135 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 33

Conread position: 121-669
Cow position: chr6:15471639-15471090 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 194

Conread position: 122-660
Cow position: chr6:14897355-14897893 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 97

Conread position: 122-669
Cow position: chr6:1078075-1077543 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 23

Conread position: 123-668
Cow position: chr6:33983992-33984516 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 66

Conread position: 123-669
Cow position: chr6:20581600-20581057 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 192

Conread position: 123-669
Cow position: chr6:28157089-28156551 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 128-428
Cow position: chr6:32664921-32664621 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 259, 187

Conread position: 128-441
Cow position: chr6:65941827-65941517 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 22

Conread position: 128-508
Cow position: chr6:19441390-19441749 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 59

Conread position: 128-669
Cow position: chr6:6595605-6596157 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 138

Conread position: 128-669
Cow position: chr6:11389433-11388892 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 187

Conread position: 128-669
Cow position: chr6:47573972-47574507 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 128-669
Cow position: chr6:54358337-54357809 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 91

Conread position: 129-382
Cow position: chr6:1109189-1109442 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 88

Conread position: 129-477
Cow position: chr6:55474488-55474842 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 185

Conread position: 129-520
Cow position: chr6:8634123-8633767 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 78, 0

Conread position: 129-522
Cow position: chr6:6601713-6601335 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 73

Conread position: 134-437
Cow position: chr6:54887404-54887104 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 17

Conread position: 134-577
Cow position: chr6:5096618-5096205 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 94

Conread position: 134-669
Cow position: chr6:6277966-6278502 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 189

Conread position: 135-530
Cow position: chr6:727438-727062 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 146

Conread position: 135-669
Cow position: chr6:9839949-9839408 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 56

Conread position: 137-669
Cow position: chr6:50637468-50637978 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 17

Conread position: 138-669
Cow position: chr6:47539556-47540097 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 16

Conread position: 140-370
Cow position: chr6:45736670-45736446 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 99, 30

Conread position: 141-644
Cow position: chr6:34030464-34030950 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 32

Conread position: 142-421
Cow position: chr6:653602-653325 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 173, 0

Conread position: 145-669
Cow position: chr6:16593148-16593667 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 132

Conread position: 148-457
Cow position: chr6:34236894-34236582 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 179, 167

Conread position: 149-669
Cow position: chr6:50526713-50527224 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 157-281
Cow position: chr6:8951050-8950926 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 157-400
Cow position: chr6:17773196-17773438 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 158, 0

Conread position: 157-669
Cow position: chr6:12971606-12972118 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 158

Conread position: 163-526
Cow position: chr6:8382156-8382517 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 163-642
Cow position: chr6:63715060-63714581 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 152

Conread position: 163-668
Cow position: chr6:53461963-53461450 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 152

Conread position: 163-669
Cow position: chr6:15783777-15783274 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 152

Conread position: 163-669
Cow position: chr6:57329494-57330000 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 152

Conread position: 164-669
Cow position: chr6:65848153-65847649 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 49

Conread position: 166-669
Cow position: chr6:34017503-34017001 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 149

Conread position: 168-386
Cow position: chr6:41233145-41233361 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 48

Conread position: 168-669
Cow position: chr6:20216175-20215674 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 147

Conread position: 178-669
Cow position: chr6:19059509-19059995 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 52

Conread position: 179-669
Cow position: chr6:37216875-37217361 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 53

Conread position: 181-668
Cow position: chr6:25408455-25407965 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 37

Conread position: 186-665
Cow position: chr6:62333510-62333033 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 275

Conread position: 189-666
Cow position: chr6:40975410-40975883 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 128

Conread position: 190-662
Cow position: chr6:42897430-42897905 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 125

Conread position: 191-514
Cow position: chr6:48873080-48872761 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 191-669
Cow position: chr6:1245677-1245199 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 124

Conread position: 191-669
Cow position: chr6:43790124-43789645 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 124

Conread position: 192-669
Cow position: chr6:10266882-10266413 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 85

Conread position: 193-669
Cow position: chr6:39897817-39897341 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 122

Conread position: 195-482
Cow position: chr6:25783166-25782880 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 198, 148

Conread position: 195-660
Cow position: chr6:58036530-58036995 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 16

Conread position: 196-669
Cow position: chr6:39080166-39080639 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 119

Conread position: 197-669
Cow position: chr6:2581853-2582332 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 118

Conread position: 199-667
Cow position: chr6:15991688-15991227 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 200-331
Cow position: chr6:61632386-61632516 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 200-468
Cow position: chr6:50624684-50624965 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 158, 115

Conread position: 200-668
Cow position: chr6:18571307-18570852 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 201-329
Cow position: chr6:14064444-14064316 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 115

Conread position: 202-394
Cow position: chr6:32419525-32419720 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 156, 113

Conread position: 205-487
Cow position: chr6:236034-235759 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 5

Conread position: 207-669
Cow position: chr6:40031297-40031766 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 33

Conread position: 209-540
Cow position: chr6:38801930-38801600 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 60

Conread position: 210-418
Cow position: chr6:27942092-27942297 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 193, 105

Conread position: 210-513
Cow position: chr6:11161125-11160828 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 105

Conread position: 210-574
Cow position: chr6:49392078-49391712 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 210-669
Cow position: chr6:29085121-29084678 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 106

Conread position: 210-669
Cow position: chr6:38988564-38988103 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 211-414
Cow position: chr6:59603561-59603358 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 111

Conread position: 211-650
Cow position: chr6:57681267-57680832 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 211-669
Cow position: chr6:7191348-7190902 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 65

Conread position: 211-669
Cow position: chr6:26829791-26830249 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 104

Conread position: 211-669
Cow position: chr6:47380947-47381392 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 104

Conread position: 213-617
Cow position: chr6:31150722-31151139 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 101

Conread position: 217-668
Cow position: chr6:40158271-40157815 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 9

Conread position: 218-669
Cow position: chr6:33451115-33451543 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 88

Conread position: 218-669
Cow position: chr6:55169755-55170192 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 219-424
Cow position: chr6:47848653-47848451 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 177, 37

Conread position: 219-665
Cow position: chr6:14199317-14199759 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 97

Conread position: 219-665
Cow position: chr6:56842293-56842740 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 103

Conread position: 220-538
Cow position: chr6:44871895-44872216 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 99

Conread position: 220-662
Cow position: chr6:22225716-22225286 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 62

Conread position: 220-668
Cow position: chr6:65859083-65858635 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 96

Conread position: 220-669
Cow position: chr6:1887523-1887075 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 244

Conread position: 220-669
Cow position: chr6:39092890-39093338 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 95

Conread position: 220-669
Cow position: chr6:53739561-53740013 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 97

Conread position: 221-548
Cow position: chr6:54376835-54377150 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 221-668
Cow position: chr6:37761528-37761959 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 353, 94

Conread position: 221-669
Cow position: chr6:539411-539857 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 35

Conread position: 225-666
Cow position: chr6:38873250-38872809 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 90

Conread position: 226-662
Cow position: chr6:8535515-8535084 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 51

Conread position: 226-669
Cow position: chr6:38917761-38917317 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 89

Conread position: 236-669
Cow position: chr6:47382884-47383307 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 237-468
Cow position: chr6:32269959-32269738 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 237-500
Cow position: chr6:68047628-68047371 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 161, 78

Conread position: 237-637
Cow position: chr6:58915046-58914651 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 104

Conread position: 237-669
Cow position: chr6:2606755-2607186 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 40

Conread position: 237-669
Cow position: chr6:31549269-31548857 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 78

Conread position: 238-669
Cow position: chr6:10536688-10536257 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 77

Conread position: 240-514
Cow position: chr6:54758647-54758921 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 195, 20

Conread position: 244-461
Cow position: chr6:10602738-10602518 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 90, 71

Conread position: 244-546
Cow position: chr6:3982188-3982500 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 151

Conread position: 245-513
Cow position: chr6:1524947-1525211 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 15

Conread position: 245-524
Cow position: chr6:31270683-31270948 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 11

Conread position: 245-525
Cow position: chr6:44920725-44920998 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 11

Conread position: 245-557
Cow position: chr6:23529247-23529555 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 10

Conread position: 245-565
Cow position: chr6:43054177-43053859 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 144, 90

Conread position: 245-639
Cow position: chr6:58951181-58950798 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 32

Conread position: 245-669
Cow position: chr6:55945127-55944721 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 351, 35

Conread position: 245-669
Cow position: chr6:65011462-65011869 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 270
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 250-546
Cow position: chr6:35206436-35206140 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 20

Conread position: 251-546
Cow position: chr6:32271901-32271612 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 251-668
Cow position: chr6:828514-828113 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 64

Conread position: 251-669
Cow position: chr6:54900393-54900811 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 65

Conread position: 252-512
Cow position: chr6:49442247-49442508 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 135

Conread position: 254-668
Cow position: chr6:68322931-68322532 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 186

Conread position: 255-666
Cow position: chr6:7175344-7174931 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 70

Conread position: 259-649
Cow position: chr6:54979217-54978827 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 56

Conread position: 259-669
Cow position: chr6:28400957-28401367 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 57

Conread position: 265-564
Cow position: chr6:16699455-16699749 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 268-506
Cow position: chr6:55041846-55041613 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 268-557
Cow position: chr6:2545514-2545799 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 268-668
Cow position: chr6:60455985-60456402 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 268-669
Cow position: chr6:17456062-17456442 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 308, 51

Conread position: 268-669
Cow position: chr6:50973966-50973582 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 47

Conread position: 273-662
Cow position: chr6:57308550-57308936 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 273-669
Cow position: chr6:4389039-4389434 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 46

Conread position: 276-669
Cow position: chr6:18667043-18666643 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 261
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 39

Conread position: 277-506
Cow position: chr6:39997755-39997527 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 42

Conread position: 277-669
Cow position: chr6:9468858-9469233 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 284-661
Cow position: chr6:48568156-48567781 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 37

Conread position: 297-655
Cow position: chr6:32125295-32125656 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 303-466
Cow position: chr6:25374029-25373867 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 305-585
Cow position: chr6:17415287-17415012 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 14

Conread position: 310-669
Cow position: chr6:24988404-24988763 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 14

Conread position: 321-665
Cow position: chr6:46390928-46391263 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 321-669
Cow position: chr6:13740928-13741270 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 66

Conread position: 321-669
Cow position: chr6:29085615-29085966 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.