Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 8-216 |
| Cow position: | chr10:42749891-42750094 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 11-219 |
| Cow position: | chr10:29110077-29109865 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 14-218 |
| Cow position: | chr10:38544846-38544649 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 175, 25 |
| Conread position: | 19-203 |
| Cow position: | chr10:1378584-1378767 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 19-212 |
| Cow position: | chr10:42752207-42752404 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 19-213 |
| Cow position: | chr10:17433429-17433628 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 19-216 |
| Cow position: | chr10:24976692-24976500 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 19-216 |
| Cow position: | chr10:29011581-29011378 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 19-216 |
| Cow position: | chr10:32429805-32430005 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 19-216 |
| Cow position: | chr10:42111500-42111695 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 154, 26 |
| Conread position: | 19-217 |
| Cow position: | chr10:62407704-62407502 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-218 |
| Cow position: | chr10:20370000-20369798 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 19-219 |
| Cow position: | chr10:2119939-2119736 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:14334771-14334568 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:30684418-30684215 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 19-219 |
| Cow position: | chr10:32701802-32702005 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:33870157-33870362 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:38537423-38537219 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:50135644-50135850 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-219 |
| Cow position: | chr10:51844118-51843916 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 19-220 |
| Cow position: | chr10:21481011-21481212 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 20-213 |
| Cow position: | chr10:20375757-20375560 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 29, 127 |
| Conread position: | 20-218 |
| Cow position: | chr10:36469370-36469174 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 20-219 |
| Cow position: | chr10:57406834-57406630 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 20-220 |
| Cow position: | chr10:53321316-53321115 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 21-198 |
| Cow position: | chr10:22583943-22583762 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 21-226 |
| Cow position: | chr10:187175-187379 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 163, 94 |
| Conread position: | 22-219 |
| Cow position: | chr10:38344279-38344082 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 22-219 |
| Cow position: | chr10:57988915-57988717 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 23-216 |
| Cow position: | chr10:29845566-29845371 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 158 |
| Conread position: | 23-218 |
| Cow position: | chr10:28642615-28642813 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 23-218 |
| Cow position: | chr10:57556258-57556059 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 23-219 |
| Cow position: | chr10:279526-279330 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 23-219 |
| Cow position: | chr10:1665453-1665254 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 23-219 |
| Cow position: | chr10:7897404-7897205 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr10:14804925-14805123 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 23-219 |
| Cow position: | chr10:16926610-16926810 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 23-219 |
| Cow position: | chr10:28256335-28256139 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 135 |
| Conread position: | 23-219 |
| Cow position: | chr10:41568181-41568378 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 23-219 |
| Cow position: | chr10:47908012-47908211 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 23-219 |
| Cow position: | chr10:55094348-55094547 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 180 |
| Conread position: | 24-218 |
| Cow position: | chr10:21739667-21739471 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 25-218 |
| Cow position: | chr10:19840764-19840959 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 28-219 |
| Cow position: | chr10:10583201-10583394 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 28-219 |
| Cow position: | chr10:39815314-39815121 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 31-218 |
| Cow position: | chr10:39040208-39040019 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 31-219 |
| Cow position: | chr10:11684546-11684354 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 31-219 |
| Cow position: | chr10:14842874-14843058 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 158, 45 |
| Conread position: | 31-219 |
| Cow position: | chr10:39180886-39181073 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 32-219 |
| Cow position: | chr10:38849378-38849567 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 33-219 |
| Cow position: | chr10:44708520-44708334 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 36-219 |
| Cow position: | chr10:31471856-31472038 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 43-200 |
| Cow position: | chr10:58928339-58928497 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 45-219 |
| Cow position: | chr10:126389-126564 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 161 |
| Conread position: | 45-219 |
| Cow position: | chr10:7280996-7280825 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 45-219 |
| Cow position: | chr10:21488066-21488243 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 47-218 |
| Cow position: | chr10:29631696-29631522 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 61-218 |
| Cow position: | chr10:46192186-46192341 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 68-219 |
| Cow position: | chr10:39778985-39778838 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 77 |
Show alignments to all cow chromosomes.