Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 14-218 |
| Cow position: | chr14:43558888-43559095 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 15-219 |
| Cow position: | chr14:11153504-11153291 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 19-173 |
| Cow position: | chr14:15275575-15275419 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-173 |
| Cow position: | chr14:17686057-17686213 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-177 |
| Cow position: | chr14:190626-190785 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 19-194 |
| Cow position: | chr14:30666158-30666336 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 19-209 |
| Cow position: | chr14:9100062-9099870 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 19-218 |
| Cow position: | chr14:44378456-44378658 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 19-218 |
| Cow position: | chr14:45678419-45678220 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 19-219 |
| Cow position: | chr14:5529729-5529922 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 19-219 |
| Cow position: | chr14:12742409-12742207 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr14:12899753-12899957 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 140 |
| Conread position: | 19-219 |
| Cow position: | chr14:13274272-13274470 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 19-219 |
| Cow position: | chr14:13303629-13303819 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 19-219 |
| Cow position: | chr14:16272638-16272433 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 19-219 |
| Cow position: | chr14:16343163-16342961 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 107 |
| Conread position: | 19-219 |
| Cow position: | chr14:16919059-16918857 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 19-219 |
| Cow position: | chr14:17000401-17000197 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:17760222-17760019 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 19-219 |
| Cow position: | chr14:22030788-22030584 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:32447451-32447652 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr14:33677722-33677929 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:37224849-37225052 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:37413087-37412888 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 19-219 |
| Cow position: | chr14:38147667-38147865 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 166, 95 |
| Conread position: | 19-219 |
| Cow position: | chr14:40341709-40341918 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:44775379-44775178 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 19-219 |
| Cow position: | chr14:45711064-45710863 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 19-219 |
| Cow position: | chr14:46391875-46391670 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 19-219 |
| Cow position: | chr14:48601683-48601477 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 19-219 |
| Cow position: | chr14:48825944-48826147 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 19-222 |
| Cow position: | chr14:13779597-13779812 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-234 |
| Cow position: | chr14:29580824-29581042 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 20-219 |
| Cow position: | chr14:33402344-33402552 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 20-219 |
| Cow position: | chr14:38530800-38530597 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 22-219 |
| Cow position: | chr14:48253650-48253453 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 22-235 |
| Cow position: | chr14:45028331-45028114 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 23-218 |
| Cow position: | chr14:751228-751425 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 23-218 |
| Cow position: | chr14:10147535-10147733 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr14:29047025-29046825 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 23-218 |
| Cow position: | chr14:33604400-33604599 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr14:45671385-45671187 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr14:1659117-1659316 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 179 |
| Conread position: | 23-219 |
| Cow position: | chr14:9046237-9046438 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-219 |
| Cow position: | chr14:27978023-27978221 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 23-219 |
| Cow position: | chr14:30595711-30595508 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 24-216 |
| Cow position: | chr14:11561366-11561166 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 138 |
| Conread position: | 28-213 |
| Cow position: | chr14:44676787-44676972 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 183 |
| Conread position: | 31-218 |
| Cow position: | chr14:30584282-30584092 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 31-219 |
| Cow position: | chr14:13863420-13863235 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 31-219 |
| Cow position: | chr14:19327592-19327401 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-219 |
| Cow position: | chr14:20783137-20783316 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 31-219 |
| Cow position: | chr14:45081725-45081915 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 33-219 |
| Cow position: | chr14:13620468-13620280 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 34-219 |
| Cow position: | chr14:50111468-50111655 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 45-219 |
| Cow position: | chr14:46657614-46657788 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 117 |
| Conread position: | 50-206 |
| Cow position: | chr14:45206996-45207153 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 66-219 |
| Cow position: | chr14:44552559-44552713 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 68-219 |
| Cow position: | chr14:44227086-44227236 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 83-218 |
| Cow position: | chr14:12611158-12611290 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 102-219 |
| Cow position: | chr14:45162771-45162890 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 105-211 |
| Cow position: | chr14:41409677-41409784 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.