Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 11-216 |
| Cow position: | chr16:17056664-17056454 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 14-219 |
| Cow position: | chr16:23671008-23671216 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 15-218 |
| Cow position: | chr16:337479-337684 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 19-170 |
| Cow position: | chr16:51405634-51405485 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 19-204 |
| Cow position: | chr16:28470784-28470599 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 19-209 |
| Cow position: | chr16:1860536-1860725 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 170, 95 |
| Conread position: | 19-210 |
| Cow position: | chr16:27714484-27714301 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 19-212 |
| Cow position: | chr16:10968016-10967826 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 19-216 |
| Cow position: | chr16:56119989-56120185 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 19-218 |
| Cow position: | chr16:1432508-1432709 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 19-218 |
| Cow position: | chr16:7464144-7464347 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 19-218 |
| Cow position: | chr16:21185931-21186133 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 19-218 |
| Cow position: | chr16:41755142-41754941 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 19-219 |
| Cow position: | chr16:406722-406521 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 19-219 |
| Cow position: | chr16:1567136-1566936 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 139 |
| Conread position: | 19-219 |
| Cow position: | chr16:2410649-2410449 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 19-219 |
| Cow position: | chr16:2482822-2482620 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 19-219 |
| Cow position: | chr16:3330253-3330457 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 19-219 |
| Cow position: | chr16:5485048-5485250 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr16:7676140-7675939 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 19-219 |
| Cow position: | chr16:15477158-15477362 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 19-219 |
| Cow position: | chr16:15493820-15494023 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:15567571-15567775 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:16270823-16270615 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 19-219 |
| Cow position: | chr16:18497971-18497782 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 19-219 |
| Cow position: | chr16:23252118-23251918 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 19-219 |
| Cow position: | chr16:23535574-23535371 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:23983614-23983815 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 19-219 |
| Cow position: | chr16:25085929-25086136 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 19-219 |
| Cow position: | chr16:25441945-25442146 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 19-219 |
| Cow position: | chr16:26664067-26664271 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:28196928-28196726 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 19-219 |
| Cow position: | chr16:37480821-37480621 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 19-219 |
| Cow position: | chr16:40295860-40295655 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:41166328-41166127 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr16:43896959-43896755 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 19-219 |
| Cow position: | chr16:49234314-49234113 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 19-219 |
| Cow position: | chr16:56916748-56916552 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 19-220 |
| Cow position: | chr16:10438569-10438772 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 19-220 |
| Cow position: | chr16:15185389-15185592 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-224 |
| Cow position: | chr16:8815789-8815580 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 150 |
| Conread position: | 20-216 |
| Cow position: | chr16:25171668-25171863 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 20-219 |
| Cow position: | chr16:26105745-26105541 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 20-219 |
| Cow position: | chr16:49255906-49255710 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 21-177 |
| Cow position: | chr16:26978458-26978616 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 22-219 |
| Cow position: | chr16:14665490-14665290 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 23-218 |
| Cow position: | chr16:3088881-3088687 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 23-218 |
| Cow position: | chr16:25188969-25189166 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 23-218 |
| Cow position: | chr16:27593827-27594025 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-220 |
| Cow position: | chr16:10375279-10375079 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 24-218 |
| Cow position: | chr16:3828947-3828755 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 24-219 |
| Cow position: | chr16:837641-837836 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 139 |
| Conread position: | 26-219 |
| Cow position: | chr16:23808661-23808847 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 29-218 |
| Cow position: | chr16:11110716-11110528 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 29-218 |
| Cow position: | chr16:11283918-11284110 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-217 |
| Cow position: | chr16:49221549-49221366 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 31-219 |
| Cow position: | chr16:4478642-4478451 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-219 |
| Cow position: | chr16:16897786-16897976 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 111 |
| Conread position: | 31-219 |
| Cow position: | chr16:19151287-19151097 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 31-219 |
| Cow position: | chr16:28170031-28169835 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 31-219 |
| Cow position: | chr16:29047351-29047541 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 34-216 |
| Cow position: | chr16:41762173-41762354 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 34-219 |
| Cow position: | chr16:31591583-31591397 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 34-227 |
| Cow position: | chr16:29034396-29034591 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 35-219 |
| Cow position: | chr16:20202332-20202513 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 45-219 |
| Cow position: | chr16:42736050-42735873 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 66-217 |
| Cow position: | chr16:19638425-19638578 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 83-219 |
| Cow position: | chr16:2726848-2726710 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 103-219 |
| Cow position: | chr16:27732979-27732860 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 107-219 |
| Cow position: | chr16:20331188-20331300 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 25 |
Show alignments to all cow chromosomes.