Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 11-219 |
| Cow position: | chr17:54563-54354 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 14-219 |
| Cow position: | chr17:24783044-24783252 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 16-230 |
| Cow position: | chr17:20488828-20489043 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 19-185 |
| Cow position: | chr17:1787048-1786884 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 19-216 |
| Cow position: | chr17:15372114-15372313 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 19-216 |
| Cow position: | chr17:24029115-24028915 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-218 |
| Cow position: | chr17:3707888-3707689 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 19-218 |
| Cow position: | chr17:4060985-4061187 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:151009-150794 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:1880986-1881192 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:2078111-2077906 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 19-219 |
| Cow position: | chr17:2580506-2580715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:6069443-6069641 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 19-219 |
| Cow position: | chr17:6260746-6260951 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:11086833-11086636 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 19-219 |
| Cow position: | chr17:14040151-14039951 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 19-219 |
| Cow position: | chr17:14240387-14240590 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:15324718-15324920 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 19-219 |
| Cow position: | chr17:15851576-15851779 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:16121655-16121463 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 19-219 |
| Cow position: | chr17:19267940-19267736 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr17:20080981-20080781 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 19-219 |
| Cow position: | chr17:22558858-22559060 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 19-219 |
| Cow position: | chr17:40805698-40805898 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 19-220 |
| Cow position: | chr17:239236-239429 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 22-218 |
| Cow position: | chr17:2174703-2174892 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 22-219 |
| Cow position: | chr17:1703801-1703605 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 23-218 |
| Cow position: | chr17:3655402-3655204 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr17:6611596-6611398 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr17:20390195-20389997 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr17:31767148-31766950 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 23-219 |
| Cow position: | chr17:6120605-6120806 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 23-219 |
| Cow position: | chr17:14216136-14215937 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-222 |
| Cow position: | chr17:34157012-34157213 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 24-219 |
| Cow position: | chr17:14895068-14895263 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 24-219 |
| Cow position: | chr17:43989393-43989592 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 31-208 |
| Cow position: | chr17:20403330-20403511 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 31-216 |
| Cow position: | chr17:4941814-4941629 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 31-216 |
| Cow position: | chr17:31533113-31533297 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 31-219 |
| Cow position: | chr17:9080522-9080331 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 31-219 |
| Cow position: | chr17:20099571-20099377 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 34-218 |
| Cow position: | chr17:18194714-18194896 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 34-219 |
| Cow position: | chr17:22133112-22133289 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 11 |
| Conread position: | 73-219 |
| Cow position: | chr17:33284891-33284743 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 104-219 |
| Cow position: | chr17:13675316-13675198 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.