Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 1-219 |
| Cow position: | chr22:27308790-27308570 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 2-215 |
| Cow position: | chr22:522405-522193 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 8-219 |
| Cow position: | chr22:1879795-1880010 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 196 |
| Conread position: | 14-219 |
| Cow position: | chr22:1323205-1323413 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 14-219 |
| Cow position: | chr22:34600348-34600553 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 19-203 |
| Cow position: | chr22:37292662-37292474 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-215 |
| Cow position: | chr22:12730680-12730485 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 19-216 |
| Cow position: | chr22:290699-290499 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 19-218 |
| Cow position: | chr22:11032750-11032954 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 19-219 |
| Cow position: | chr22:559706-559501 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 19-219 |
| Cow position: | chr22:1281728-1281513 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 191 |
| Conread position: | 19-219 |
| Cow position: | chr22:1520020-1519813 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 19-219 |
| Cow position: | chr22:3803191-3803389 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 104, 138 |
| Conread position: | 19-219 |
| Cow position: | chr22:6502137-6501930 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 19-219 |
| Cow position: | chr22:8121080-8120874 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 19-219 |
| Cow position: | chr22:17327452-17327250 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr22:36184762-36184966 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 19-219 |
| Cow position: | chr22:36860532-36860333 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 19-219 |
| Cow position: | chr22:37140901-37141105 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 196 |
| Conread position: | 19-219 |
| Cow position: | chr22:39468517-39468314 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 183 |
| Conread position: | 19-219 |
| Cow position: | chr22:42992179-42992381 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 19-219 |
| Cow position: | chr22:44934973-44935176 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 19-219 |
| Cow position: | chr22:46580718-46580513 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 20-219 |
| Cow position: | chr22:18815363-18815159 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 144 |
| Conread position: | 20-219 |
| Cow position: | chr22:37133661-37133860 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 20-219 |
| Cow position: | chr22:44477629-44477827 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 22-219 |
| Cow position: | chr22:6332716-6332916 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 22-219 |
| Cow position: | chr22:34169345-34169545 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 23-187 |
| Cow position: | chr22:16201935-16202102 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 23-216 |
| Cow position: | chr22:19320021-19320217 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-217 |
| Cow position: | chr22:15312944-15312746 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 23-218 |
| Cow position: | chr22:3277352-3277154 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr22:6021670-6021870 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 23-218 |
| Cow position: | chr22:11804047-11803848 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 23-218 |
| Cow position: | chr22:19536561-19536756 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 23-218 |
| Cow position: | chr22:20239834-20239636 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr22:10908829-10908632 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 23-219 |
| Cow position: | chr22:30677676-30677481 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 23-219 |
| Cow position: | chr22:37268168-37268372 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 24-219 |
| Cow position: | chr22:694630-694828 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 24-219 |
| Cow position: | chr22:44492062-44492259 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 28-219 |
| Cow position: | chr22:1268747-1268554 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 31-219 |
| Cow position: | chr22:19142672-19142486 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 31-219 |
| Cow position: | chr22:35906366-35906184 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 31-220 |
| Cow position: | chr22:538122-538311 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 45-216 |
| Cow position: | chr22:15053748-15053914 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 106 |
| Conread position: | 45-219 |
| Cow position: | chr22:41418293-41418117 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 46-219 |
| Cow position: | chr22:21035357-21035183 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 50-219 |
| Cow position: | chr22:31334012-31333841 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 83-219 |
| Cow position: | chr22:6602165-6602027 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 90-219 |
| Cow position: | chr22:33351755-33351885 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 128 |
Show alignments to all cow chromosomes.