Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 9-218 |
| Cow position: | chr24:29305237-29305024 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-219 |
| Cow position: | chr24:12150232-12150021 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 11-208 |
| Cow position: | chr24:14754767-14754968 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-199 |
| Cow position: | chr24:6059986-6060169 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 19-216 |
| Cow position: | chr24:35840980-35840775 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 19-217 |
| Cow position: | chr24:17695893-17695691 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr24:147522-147319 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr24:4414443-4414243 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 133 |
| Conread position: | 19-219 |
| Cow position: | chr24:6332605-6332406 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 19-219 |
| Cow position: | chr24:6337479-6337679 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 173, 20 |
| Conread position: | 19-219 |
| Cow position: | chr24:8151189-8150996 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 19-219 |
| Cow position: | chr24:9545151-9545345 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 144 |
| Conread position: | 19-219 |
| Cow position: | chr24:12087293-12087499 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr24:12128979-12128772 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 19-219 |
| Cow position: | chr24:14383550-14383343 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 19-219 |
| Cow position: | chr24:19834484-19834687 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr24:22972180-22972383 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr24:29188380-29188583 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr24:35869466-35869270 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 19-219 |
| Cow position: | chr24:36558683-36558475 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 19-219 |
| Cow position: | chr24:38638628-38638825 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 19-220 |
| Cow position: | chr24:6668718-6668526 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 20-217 |
| Cow position: | chr24:13179925-13179727 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 5 |
| Conread position: | 20-219 |
| Cow position: | chr24:33934480-33934679 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 21-216 |
| Cow position: | chr24:12238383-12238579 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 22-219 |
| Cow position: | chr24:12334666-12334466 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 22-220 |
| Cow position: | chr24:6129916-6130118 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 22-227 |
| Cow position: | chr24:6659406-6659198 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 23-218 |
| Cow position: | chr24:6327938-6327739 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 179 |
| Conread position: | 23-218 |
| Cow position: | chr24:23504771-23504573 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-218 |
| Cow position: | chr24:30430706-30430904 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr24:5992134-5991935 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr24:6024014-6023815 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 23-219 |
| Cow position: | chr24:6085154-6085353 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-219 |
| Cow position: | chr24:6435574-6435773 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 24-219 |
| Cow position: | chr24:6407130-6407325 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 24-220 |
| Cow position: | chr24:7089875-7089676 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 31-186 |
| Cow position: | chr24:1450535-1450685 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 31-219 |
| Cow position: | chr24:16083927-16083736 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 31-220 |
| Cow position: | chr24:13189290-13189478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 34-219 |
| Cow position: | chr24:17321816-17322004 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 35-219 |
| Cow position: | chr24:19702604-19702788 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 43-219 |
| Cow position: | chr24:12163054-12163235 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 43-219 |
| Cow position: | chr24:19640798-19640968 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 45-219 |
| Cow position: | chr24:6142203-6142374 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 47-214 |
| Cow position: | chr24:6353266-6353430 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 103-218 |
| Cow position: | chr24:9090879-9090762 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.