Cow genome map

Conread name: Lym2-sn65_H12.f

Conread position: 6-219
Cow position: chr28:5799336-5799546 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 9

Conread position: 12-219
Cow position: chr28:14232888-14232679 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 17-219
Cow position: chr28:12151353-12151560 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 19-167
Cow position: chr28:8719896-8719746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 19-172
Cow position: chr28:15684289-15684450 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 19-174
Cow position: chr28:5113246-5113090 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 20

Conread position: 19-207
Cow position: chr28:2988033-2987846 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 104, 138

Conread position: 19-207
Cow position: chr28:10581040-10580847 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 19-215
Cow position: chr28:7811500-7811687 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 173, 20

Conread position: 19-216
Cow position: chr28:5803089-5803290 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 19-218
Cow position: chr28:1386348-1386146 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 20

Conread position: 19-218
Cow position: chr28:29821046-29821248 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 19-219
Cow position: chr28:1505917-1506120 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 19-219
Cow position: chr28:1813813-1813612 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 144

Conread position: 19-219
Cow position: chr28:3191205-3191002 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 19-219
Cow position: chr28:5750657-5750454 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 19-219
Cow position: chr28:5938535-5938737 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 146

Conread position: 19-219
Cow position: chr28:7003046-7003249 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 19-219
Cow position: chr28:7741498-7741695 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 20

Conread position: 19-219
Cow position: chr28:7788844-7788645 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 61

Conread position: 19-219
Cow position: chr28:8380112-8380317 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 19-219
Cow position: chr28:10072325-10072526 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 104, 24

Conread position: 19-219
Cow position: chr28:10496479-10496279 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 19-219
Cow position: chr28:14704337-14704134 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 19-219
Cow position: chr28:22232224-22232025 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 20

Conread position: 19-219
Cow position: chr28:32791327-32791128 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 57

Conread position: 19-224
Cow position: chr28:6231724-6231514 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 56

Conread position: 19-229
Cow position: chr28:29760879-29760665 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 19-235
Cow position: chr28:10460555-10460340 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 20

Conread position: 20-219
Cow position: chr28:24668663-24668863 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 19

Conread position: 22-218
Cow position: chr28:17666253-17666054 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 22-219
Cow position: chr28:1166825-1166626 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 54

Conread position: 22-219
Cow position: chr28:2085513-2085712 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 17

Conread position: 22-219
Cow position: chr28:18519396-18519198 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 142

Conread position: 22-219
Cow position: chr28:22260098-22259898 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 23-218
Cow position: chr28:484542-484343 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 23-218
Cow position: chr28:1954408-1954606 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 23-218
Cow position: chr28:6538210-6538012 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 179

Conread position: 23-218
Cow position: chr28:7027203-7027005 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 23-218
Cow position: chr28:14751598-14751796 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 23-219
Cow position: chr28:12409180-12408984 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 129

Conread position: 23-219
Cow position: chr28:24589908-24590110 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 23-219
Cow position: chr28:26425201-26425001 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 25-228
Cow position: chr28:18146677-18146476 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 30-219
Cow position: chr28:17381799-17381605 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 182

Conread position: 31-218
Cow position: chr28:21360559-21360744 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 112

Conread position: 31-219
Cow position: chr28:7827049-7827239 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 141

Conread position: 31-219
Cow position: chr28:13461043-13461229 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 84

Conread position: 36-219
Cow position: chr28:783726-783910 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 31

Conread position: 45-219
Cow position: chr28:21566531-21566713 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 55-219
Cow position: chr28:25760590-25760756 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 94, 34

Conread position: 68-219
Cow position: chr28:5567240-5567390 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 94

Conread position: 89-217
Cow position: chr28:10646300-10646175 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 55

Conread position: 89-219
Cow position: chr28:17389522-17389654 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 105-219
Cow position: chr28:13374118-13374002 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.