Cow genome map
| Conread name: | Lym2-sn65_H12.f |
| Conread position: | 9-218 |
| Cow position: | chr7:6630247-6630035 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 15-219 |
| Cow position: | chr7:55536868-55536659 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 19-169 |
| Cow position: | chr7:40319968-40320126 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-174 |
| Cow position: | chr7:8144169-8144013 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-186 |
| Cow position: | chr7:39097443-39097279 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 19-207 |
| Cow position: | chr7:21930201-21930392 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-217 |
| Cow position: | chr7:59684863-59685050 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 19-218 |
| Cow position: | chr7:3156533-3156734 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 19-218 |
| Cow position: | chr7:23837636-23837841 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 19-218 |
| Cow position: | chr7:59138711-59138910 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 19-218 |
| Cow position: | chr7:65458123-65457921 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 19-218 |
| Cow position: | chr7:67799887-67800089 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:5261860-5261651 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:5309049-5308847 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 19-219 |
| Cow position: | chr7:10430359-10430156 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:13532839-13532639 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 19-219 |
| Cow position: | chr7:14138532-14138328 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:20774268-20774067 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 19-219 |
| Cow position: | chr7:21986490-21986684 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 19-219 |
| Cow position: | chr7:24878814-24878614 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 170, 55 |
| Conread position: | 19-219 |
| Cow position: | chr7:29368961-29368758 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 143 |
| Conread position: | 19-219 |
| Cow position: | chr7:29471523-29471736 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 19-219 |
| Cow position: | chr7:33332624-33332828 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:34486980-34487181 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 19-219 |
| Cow position: | chr7:39792834-39793036 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:46901016-46900804 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 19-219 |
| Cow position: | chr7:48635502-48635702 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 19-219 |
| Cow position: | chr7:64239939-64239737 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 19-219 |
| Cow position: | chr7:66905784-66905989 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-219 |
| Cow position: | chr7:67429635-67429841 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 19-220 |
| Cow position: | chr7:14214300-14214100 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 19-222 |
| Cow position: | chr7:59679911-59680123 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 19-224 |
| Cow position: | chr7:21126598-21126390 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 20-208 |
| Cow position: | chr7:30118468-30118283 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 20-219 |
| Cow position: | chr7:42871206-42871410 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 20-220 |
| Cow position: | chr7:39554424-39554222 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 20-225 |
| Cow position: | chr7:59940262-59940477 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 21-219 |
| Cow position: | chr7:57211229-57211417 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 21-220 |
| Cow position: | chr7:67495176-67495372 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 22-219 |
| Cow position: | chr7:1371579-1371377 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 22-219 |
| Cow position: | chr7:1452713-1452910 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 22-219 |
| Cow position: | chr7:38397882-38398083 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 22-219 |
| Cow position: | chr7:45948070-45947872 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 23-187 |
| Cow position: | chr7:27760204-27760038 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-217 |
| Cow position: | chr7:6721212-6721410 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 23-218 |
| Cow position: | chr7:15805-15609 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 153 |
| Conread position: | 23-218 |
| Cow position: | chr7:11447627-11447831 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 23-219 |
| Cow position: | chr7:545912-546111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 23-219 |
| Cow position: | chr7:11462977-11462782 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 23-219 |
| Cow position: | chr7:20798374-20798175 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 23-219 |
| Cow position: | chr7:52763346-52763548 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 24-218 |
| Cow position: | chr7:27606242-27606045 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 24-218 |
| Cow position: | chr7:54670985-54670786 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 25-223 |
| Cow position: | chr7:20533020-20533220 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 27-219 |
| Cow position: | chr7:51015334-51015527 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 28-218 |
| Cow position: | chr7:24058522-24058714 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 29-219 |
| Cow position: | chr7:21311526-21311715 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 29-219 |
| Cow position: | chr7:24807397-24807206 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 29-220 |
| Cow position: | chr7:58994658-58994853 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 31-216 |
| Cow position: | chr7:67676175-67676355 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 91, 101 |
| Conread position: | 31-218 |
| Cow position: | chr7:54643406-54643227 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 96, 52 |
| Conread position: | 31-219 |
| Cow position: | chr7:21233932-21233741 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-220 |
| Cow position: | chr7:63386809-63387002 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 33-219 |
| Cow position: | chr7:526056-526238 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 34-219 |
| Cow position: | chr7:27101211-27101023 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 35-219 |
| Cow position: | chr7:5663645-5663831 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 42-218 |
| Cow position: | chr7:1609548-1609376 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 45-216 |
| Cow position: | chr7:19990118-19990281 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 54-218 |
| Cow position: | chr7:26852552-26852719 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 70-219 |
| Cow position: | chr7:58338275-58338128 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 30 |
Show alignments to all cow chromosomes.