Cow genome map
| Conread name: | Lym2-sn66_E02.f |
| Conread position: | 82-404 |
| Cow position: | chr1:17011952-17011634 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 104-405 |
| Cow position: | chr1:31417710-31417396 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 111-403 |
| Cow position: | chr1:30519402-30519696 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 114-381 |
| Cow position: | chr1:53199352-53199616 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 114-381 |
| Cow position: | chr1:58336650-58336915 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 118-301 |
| Cow position: | chr1:72992354-72992535 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 118-390 |
| Cow position: | chr1:58882963-58882696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 118-395 |
| Cow position: | chr1:73070236-73069970 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 118-398 |
| Cow position: | chr1:49973368-49973092 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 13 |
| Conread position: | 118-398 |
| Cow position: | chr1:93855336-93855610 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 119-405 |
| Cow position: | chr1:30282880-30282597 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 120-372 |
| Cow position: | chr1:24443511-24443261 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 19 |
| Conread position: | 120-376 |
| Cow position: | chr1:57568755-57569006 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 244, 19 |
| Conread position: | 120-380 |
| Cow position: | chr1:17940975-17940721 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-381 |
| Cow position: | chr1:6195054-6195312 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 120-381 |
| Cow position: | chr1:76620861-76620606 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-396 |
| Cow position: | chr1:31365270-31365008 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-396 |
| Cow position: | chr1:72081586-72081858 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:3385204-3384930 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:5502788-5503061 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:21999134-21998863 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:26518066-26517794 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:28873900-28874174 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:33551746-33552020 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:55777403-55777677 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:62243820-62243548 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:62805361-62805078 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:63604956-63604679 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:68606721-68606447 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:72984323-72984592 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:74285970-74285696 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:79456150-79455861 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 135, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:85779618-85779353 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:94660495-94660767 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr1:99914243-99914519 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 120-398 |
| Cow position: | chr1:102434218-102433948 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-399 |
| Cow position: | chr1:25179207-25178935 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 120-399 |
| Cow position: | chr1:25550781-25551055 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-399 |
| Cow position: | chr1:69921615-69921340 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-401 |
| Cow position: | chr1:12061394-12061114 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 120-403 |
| Cow position: | chr1:8825869-8826146 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 9 |
| Conread position: | 120-403 |
| Cow position: | chr1:30534198-30533921 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-403 |
| Cow position: | chr1:48246652-48246940 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 120-403 |
| Cow position: | chr1:56143512-56143238 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-403 |
| Cow position: | chr1:69403826-69404106 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 19 |
| Conread position: | 120-403 |
| Cow position: | chr1:72186062-72185782 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-403 |
| Cow position: | chr1:91892297-91892021 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 120-404 |
| Cow position: | chr1:82923367-82923081 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 263, 19 |
| Conread position: | 120-405 |
| Cow position: | chr1:79636160-79635874 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 9 |
| Conread position: | 121-332 |
| Cow position: | chr1:33896563-33896771 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-376 |
| Cow position: | chr1:69767275-69767526 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-379 |
| Cow position: | chr1:71561752-71561497 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-390 |
| Cow position: | chr1:17035780-17035515 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-390 |
| Cow position: | chr1:21088234-21088502 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-398 |
| Cow position: | chr1:52358451-52358165 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 121-398 |
| Cow position: | chr1:56193347-56193074 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 260, 18 |
| Conread position: | 121-399 |
| Cow position: | chr1:13451025-13451299 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-399 |
| Cow position: | chr1:44044603-44044877 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 121-399 |
| Cow position: | chr1:66999832-67000104 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 121-399 |
| Cow position: | chr1:82912317-82912043 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 121-399 |
| Cow position: | chr1:91899838-91900118 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 121-400 |
| Cow position: | chr1:9381781-9381509 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-405 |
| Cow position: | chr1:5355947-5356229 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:8555149-8555432 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:9259299-9259584 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 257, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:11291290-11291009 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:20829731-20830005 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 228, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:28711710-28711994 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:33852106-33852390 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:40575034-40575318 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 262, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:56164369-56164662 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:59209329-59209045 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 274, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:60340120-60340403 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:61310040-61310323 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:67834319-67834025 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:85792499-85792781 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 260, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:86547321-86547035 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr1:86595675-86595392 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 123-398 |
| Cow position: | chr1:79111313-79111582 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 123-399 |
| Cow position: | chr1:18274009-18274285 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 123-400 |
| Cow position: | chr1:20081108-20080848 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 123-402 |
| Cow position: | chr1:58200690-58200410 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 209 |
| Conread position: | 123-405 |
| Cow position: | chr1:18241690-18241413 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 149, 6 |
| Conread position: | 123-405 |
| Cow position: | chr1:102781472-102781197 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 118, 6 |
| Conread position: | 125-381 |
| Cow position: | chr1:88131597-88131851 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 125-398 |
| Cow position: | chr1:18139631-18139360 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 125-398 |
| Cow position: | chr1:57697331-57697073 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 148, 14 |
| Conread position: | 125-402 |
| Cow position: | chr1:30063208-30063472 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 274, 23 |
| Conread position: | 126-396 |
| Cow position: | chr1:16216850-16216584 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 127-282 |
| Cow position: | chr1:29979105-29978949 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 129-312 |
| Cow position: | chr1:11860420-11860242 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-381 |
| Cow position: | chr1:29363125-29363371 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 129-396 |
| Cow position: | chr1:23052590-23052854 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 129-398 |
| Cow position: | chr1:67287651-67287917 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 15 |
| Conread position: | 129-400 |
| Cow position: | chr1:38416716-38416970 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-403 |
| Cow position: | chr1:99019183-99018910 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 129-405 |
| Cow position: | chr1:31397520-31397793 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 129-405 |
| Cow position: | chr1:53364386-53364657 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 129-405 |
| Cow position: | chr1:55276205-55275927 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 132-398 |
| Cow position: | chr1:63502659-63502919 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 132-405 |
| Cow position: | chr1:20525306-20525579 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 134-375 |
| Cow position: | chr1:27178631-27178393 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 134-400 |
| Cow position: | chr1:72038726-72038468 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 134-405 |
| Cow position: | chr1:57657717-57657987 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 92, 70 |
| Conread position: | 135-405 |
| Cow position: | chr1:18026965-18026693 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 200 |
| Conread position: | 139-396 |
| Cow position: | chr1:61730712-61730465 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 139-402 |
| Cow position: | chr1:22843479-22843740 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 258, 146 |
| Conread position: | 139-403 |
| Cow position: | chr1:42737295-42737558 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 191 |
| Conread position: | 139-406 |
| Cow position: | chr1:40512178-40511905 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 141-405 |
| Cow position: | chr1:82653503-82653766 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 142-398 |
| Cow position: | chr1:24652127-24652371 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 232, 76 |
| Conread position: | 142-403 |
| Cow position: | chr1:73198184-73197924 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 144-403 |
| Cow position: | chr1:70419542-70419282 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 159 |
| Conread position: | 144-404 |
| Cow position: | chr1:57662867-57663121 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 148-396 |
| Cow position: | chr1:57972866-57972614 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 187 |
| Conread position: | 149-400 |
| Cow position: | chr1:88269389-88269140 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 186 |
| Conread position: | 151-398 |
| Cow position: | chr1:15027211-15027450 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 151-398 |
| Cow position: | chr1:98659058-98658815 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 153-400 |
| Cow position: | chr1:1460345-1460096 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 163-377 |
| Cow position: | chr1:77115841-77115629 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 165-356 |
| Cow position: | chr1:40054499-40054688 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 165-383 |
| Cow position: | chr1:67292493-67292709 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 170 |
| Conread position: | 171-403 |
| Cow position: | chr1:65387189-65387420 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 210, 159 |
| Conread position: | 172-405 |
| Cow position: | chr1:55321202-55320975 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 180-400 |
| Cow position: | chr1:55156123-55155906 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 95, 107 |
| Conread position: | 194-378 |
| Cow position: | chr1:99315168-99315347 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 196-400 |
| Cow position: | chr1:88374910-88374712 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 215-403 |
| Cow position: | chr1:3934347-3934158 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 158, 115 |
| Conread position: | 227-403 |
| Cow position: | chr1:40683814-40683642 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 170, 101 |
| Conread position: | 236-405 |
| Cow position: | chr1:22619703-22619536 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 159, 7 |
| Conread position: | 247-398 |
| Cow position: | chr1:32566976-32566829 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 248-405 |
| Cow position: | chr1:43636624-43636783 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 125, 82 |
Show alignments to all cow chromosomes.