Cow genome map
Conread name: | Lym2-sn66_E02.f |
Conread position: | 109-332 |
Cow position: | chr11:51279945-51279727 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 155 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 116, 38 |
Conread position: | 114-405 |
Cow position: | chr11:44518392-44518101 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 203 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 188, 25 |
Conread position: | 118-381 |
Cow position: | chr11:53431578-53431320 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 119-398 |
Cow position: | chr11:38834956-38834681 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 119-399 |
Cow position: | chr11:52419872-52420156 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 106, 10 |
Conread position: | 120-353 |
Cow position: | chr11:23877776-23878005 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 173 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-377 |
Cow position: | chr11:53286684-53286431 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 116, 19 |
Conread position: | 120-381 |
Cow position: | chr11:11988592-11988864 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 201 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 152, 19 |
Conread position: | 120-381 |
Cow position: | chr11:26547991-26548249 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr11:12357936-12357661 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 19 |
Conread position: | 120-398 |
Cow position: | chr11:19102015-19101741 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr11:29668128-29667852 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 0 |
Conread position: | 120-398 |
Cow position: | chr11:41170215-41169940 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr11:43514152-43513878 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 120-398 |
Cow position: | chr11:44156767-44156493 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr11:58134874-58135150 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 19 |
Conread position: | 120-398 |
Cow position: | chr11:71330073-71330349 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 19 |
Conread position: | 120-403 |
Cow position: | chr11:10847931-10848211 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr11:26124446-26124166 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 121-332 |
Cow position: | chr11:28229274-28229065 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-369 |
Cow position: | chr11:36743698-36743451 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-378 |
Cow position: | chr11:63654855-63654602 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-381 |
Cow position: | chr11:37476519-37476263 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 183 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-381 |
Cow position: | chr11:57627577-57627320 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-381 |
Cow position: | chr11:73477790-73478047 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-398 |
Cow position: | chr11:28054128-28053860 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 201 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-399 |
Cow position: | chr11:3493476-3493749 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 200 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-399 |
Cow position: | chr11:9734191-9733923 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 197 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 181, 18 |
Conread position: | 121-400 |
Cow position: | chr11:54484930-54484656 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 8 |
Conread position: | 121-405 |
Cow position: | chr11:5342440-5342156 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 200 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:15984107-15984398 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 207 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 181, 18 |
Conread position: | 121-405 |
Cow position: | chr11:17107204-17106920 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 204 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 114, 18 |
Conread position: | 121-405 |
Cow position: | chr11:19063591-19063309 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 18 |
Conread position: | 121-405 |
Cow position: | chr11:20733760-20733473 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 205 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:28108618-28108900 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:32452307-32452590 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 200 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:33194077-33193795 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 202 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:61400578-61400303 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:64081601-64081319 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 202 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr11:67450976-67451258 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 199 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 251, 18 |
Conread position: | 121-405 |
Cow position: | chr11:67846087-67845803 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 199 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 188, 18 |
Conread position: | 122-334 |
Cow position: | chr11:52657590-52657385 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 147 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 151, 17 |
Conread position: | 122-396 |
Cow position: | chr11:9601850-9601580 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 122-398 |
Cow position: | chr11:4269920-4269648 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 122-398 |
Cow position: | chr11:44252280-44252551 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 203 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 16, 86 |
Conread position: | 122-398 |
Cow position: | chr11:85393325-85393060 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 123-267 |
Cow position: | chr11:42432619-42432761 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 123-370 |
Cow position: | chr11:20510877-20511122 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 175 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 15, 91 |
Conread position: | 123-379 |
Cow position: | chr11:77254244-77253994 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 177 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 83, 22 |
Conread position: | 123-396 |
Cow position: | chr11:27669851-27669585 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 15, 138 |
Conread position: | 123-400 |
Cow position: | chr11:23127412-23127141 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 190 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 123-403 |
Cow position: | chr11:4063378-4063109 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 204 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 15, 42 |
Conread position: | 123-405 |
Cow position: | chr11:9156674-9156388 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 16 |
Conread position: | 125-331 |
Cow position: | chr11:82123670-82123468 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 62, 14 |
Conread position: | 127-398 |
Cow position: | chr11:44582848-44582581 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 12 |
Conread position: | 129-273 |
Cow position: | chr11:39803694-39803836 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 102, 10 |
Conread position: | 129-294 |
Cow position: | chr11:76373728-76373566 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-301 |
Cow position: | chr11:4027071-4026900 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 85, 10 |
Conread position: | 129-368 |
Cow position: | chr11:31874289-31874062 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-381 |
Cow position: | chr11:3855723-3855972 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 117, 10 |
Conread position: | 129-390 |
Cow position: | chr11:30123357-30123098 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 189 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 71, 10 |
Conread position: | 129-390 |
Cow position: | chr11:31926661-31926915 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-398 |
Cow position: | chr11:9216588-9216328 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 162, 10 |
Conread position: | 129-398 |
Cow position: | chr11:47759794-47759527 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 10 |
Conread position: | 129-399 |
Cow position: | chr11:29232520-29232259 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-399 |
Cow position: | chr11:31861393-31861656 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 200 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 253, 10 |
Conread position: | 129-400 |
Cow position: | chr11:50027382-50027123 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-405 |
Cow position: | chr11:1495599-1495324 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 10 |
Conread position: | 133-403 |
Cow position: | chr11:21902602-21902336 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 193 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 134-381 |
Cow position: | chr11:26070565-26070330 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 184 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 138, 167 |
Conread position: | 134-398 |
Cow position: | chr11:71982034-71981761 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 200, 171 |
Conread position: | 134-406 |
Cow position: | chr11:1489648-1489378 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 247, 23 |
Conread position: | 139-345 |
Cow position: | chr11:30252696-30252901 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 157, 192 |
Conread position: | 139-405 |
Cow position: | chr11:17546663-17546926 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 86, 10 |
Conread position: | 141-279 |
Cow position: | chr11:46246061-46245921 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 141-363 |
Cow position: | chr11:10091179-10091399 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 141-398 |
Cow position: | chr11:12094068-12094320 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 141-403 |
Cow position: | chr11:24393816-24394074 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 191 |
Conread position: | 150-405 |
Cow position: | chr11:4056968-4056715 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 181 |
Conread position: | 151-405 |
Cow position: | chr11:4034837-4034583 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 191 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 232, 43 |
Conread position: | 153-346 |
Cow position: | chr11:28391154-28391346 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 178, 172 |
Conread position: | 154-405 |
Cow position: | chr11:7110591-7110345 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 27, 23 |
Conread position: | 163-396 |
Cow position: | chr11:38219813-38219577 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 170-396 |
Cow position: | chr11:18887386-18887610 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 190-403 |
Cow position: | chr11:84390095-84390305 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 201, 9 |
Conread position: | 191-391 |
Cow position: | chr11:40775461-40775261 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 150 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 181, 138 |
Conread position: | 214-405 |
Cow position: | chr11:22935667-22935855 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 227-403 |
Cow position: | chr11:72310448-72310273 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 138 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 150, 103 |
Show alignments to all cow chromosomes.