Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               109-332
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               114-405
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               188, 25
               

               Conread position:
               118-381
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               119-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               119-399
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               120-353
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-377
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               152, 19
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               121-332
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-369
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-378
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               181, 18
               

               Conread position:
               121-400
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 8
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               181, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               251, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               188, 18
               

               Conread position:
               122-334
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               122-396
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               123-267
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               123-370
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               123-379
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               123-396
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 138
               

               Conread position:
               123-400
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               123-403
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 16
               

               Conread position:
               125-331
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               127-398
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               129-273
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               129-294
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-301
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               129-368
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-381
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 10
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               253, 10
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 10
               

               Conread position:
               133-403
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               134-381
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 167
               

               Conread position:
               134-398
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               200, 171
               

               Conread position:
               134-406
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               247, 23
               

               Conread position:
               139-345
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               157, 192
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               141-279
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               141-363
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               141-398
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               141-403
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 191
               

               Conread position:
               150-405
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 181
               

               Conread position:
               151-405
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               232, 43
               

               Conread position:
               153-346
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               178, 172
               

               Conread position:
               154-405
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               27, 23
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               170-396
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               190-403
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               201, 9
               

               Conread position:
               191-391
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               181, 138
               

               Conread position:
               214-405
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               227-403
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               150, 103
               
Show alignments to all cow chromosomes.