Cow genome map

Conread name: Lym2-sn66_E02.f

Conread position: 104-403
Cow position: chr13:15543073-15543370 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 294, 117

Conread position: 107-398
Cow position: chr13:16254848-16254561 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 32

Conread position: 108-390
Cow position: chr13:34029947-34030224 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 86, 31

Conread position: 109-398
Cow position: chr13:34049283-34049558 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 163, 19

Conread position: 118-398
Cow position: chr13:9045326-9045592 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 119-398
Cow position: chr13:13900417-13900690 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 119-403
Cow position: chr13:4941938-4942213 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 20

Conread position: 120-325
Cow position: chr13:31730326-31730122 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 120-377
Cow position: chr13:33335761-33335511 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 232, 9

Conread position: 120-379
Cow position: chr13:6758519-6758773 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 107, 19

Conread position: 120-391
Cow position: chr13:32545929-32546196 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-392
Cow position: chr13:30303832-30304101 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr13:1592603-1592332 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr13:3653771-3653497 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr13:4484346-4484618 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 263, 19

Conread position: 120-398
Cow position: chr13:32737275-32737001 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr13:34041785-34041514 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 121-345
Cow position: chr13:677567-677787 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 18

Conread position: 121-356
Cow position: chr13:30244131-30243900 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 104, 18

Conread position: 121-377
Cow position: chr13:58118360-58118107 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 18

Conread position: 121-381
Cow position: chr13:2388265-2388008 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 121-398
Cow position: chr13:15923831-15923557 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 121-399
Cow position: chr13:21839650-21839378 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 18

Conread position: 121-403
Cow position: chr13:15519958-15519677 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 118, 123

Conread position: 121-404
Cow position: chr13:60466878-60467155 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 121-405
Cow position: chr13:3056586-3056304 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr13:17309022-17309304 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr13:32984801-32984512 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 251, 18

Conread position: 121-405
Cow position: chr13:34424311-34424593 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr13:47229455-47229170 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr13:49974226-49974508 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr13:52646326-52646044 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 18

Conread position: 122-399
Cow position: chr13:50110002-50110275 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 103, 17

Conread position: 122-403
Cow position: chr13:31611756-31611478 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 17

Conread position: 123-399
Cow position: chr13:60700114-60699836 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 6

Conread position: 125-389
Cow position: chr13:19441122-19441380 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 14

Conread position: 127-403
Cow position: chr13:6667575-6667303 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 12

Conread position: 129-275
Cow position: chr13:48358265-48358411 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 144, 10

Conread position: 129-348
Cow position: chr13:34765891-34765685 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 129-376
Cow position: chr13:47567775-47568016 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 129-381
Cow position: chr13:35757829-35758079 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 201, 0

Conread position: 129-404
Cow position: chr13:34325002-34324725 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 132-368
Cow position: chr13:30238798-30239030 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 132-380
Cow position: chr13:20541484-20541240 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 133-378
Cow position: chr13:57024259-57024501 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 167, 0

Conread position: 134-360
Cow position: chr13:34910304-34910083 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 158, 0

Conread position: 135-404
Cow position: chr13:25692245-25692512 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 165

Conread position: 139-390
Cow position: chr13:15450550-15450316 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 139-396
Cow position: chr13:43982521-43982279 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 139-405
Cow position: chr13:11798144-11797888 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 261, 176

Conread position: 139-405
Cow position: chr13:26844595-26844846 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 139-405
Cow position: chr13:42218358-42218081 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 77

Conread position: 140-399
Cow position: chr13:17331194-17330938 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 223, 21

Conread position: 149-396
Cow position: chr13:28670686-28670443 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 55

Conread position: 152-379
Cow position: chr13:14178258-14178034 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 56

Conread position: 158-398
Cow position: chr13:30654795-30654557 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 0

Conread position: 165-399
Cow position: chr13:8797194-8796968 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 165-405
Cow position: chr13:21696844-21697083 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 51

Conread position: 166-379
Cow position: chr13:5625412-5625199 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 166

Conread position: 174-424
Cow position: chr13:34154159-34153913 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 237, 156

Conread position: 183-405
Cow position: chr13:34938075-34938294 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 208, 147

Conread position: 197-396
Cow position: chr13:35031748-35031944 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 227-399
Cow position: chr13:31733235-31733065 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 237-398
Cow position: chr13:14402433-14402275 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 248-400
Cow position: chr13:43590007-43590156 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.