Cow genome map
Conread name: | Lym2-sn66_E02.f |
Conread position: | 104-403 |
Cow position: | chr13:15543073-15543370 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 185 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 294, 117 |
Conread position: | 107-398 |
Cow position: | chr13:16254848-16254561 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 32 |
Conread position: | 108-390 |
Cow position: | chr13:34029947-34030224 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 86, 31 |
Conread position: | 109-398 |
Cow position: | chr13:34049283-34049558 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 197 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 163, 19 |
Conread position: | 118-398 |
Cow position: | chr13:9045326-9045592 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 207 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 119-398 |
Cow position: | chr13:13900417-13900690 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 119-403 |
Cow position: | chr13:4941938-4942213 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 120-325 |
Cow position: | chr13:31730326-31730122 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-377 |
Cow position: | chr13:33335761-33335511 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 232, 9 |
Conread position: | 120-379 |
Cow position: | chr13:6758519-6758773 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 176 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 107, 19 |
Conread position: | 120-391 |
Cow position: | chr13:32545929-32546196 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-392 |
Cow position: | chr13:30303832-30304101 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 196 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr13:1592603-1592332 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr13:3653771-3653497 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr13:4484346-4484618 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 198 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 263, 19 |
Conread position: | 120-398 |
Cow position: | chr13:32737275-32737001 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr13:34041785-34041514 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 121-345 |
Cow position: | chr13:677567-677787 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-356 |
Cow position: | chr13:30244131-30243900 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-377 |
Cow position: | chr13:58118360-58118107 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 182 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-381 |
Cow position: | chr13:2388265-2388008 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 188 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-398 |
Cow position: | chr13:15923831-15923557 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 0 |
Conread position: | 121-399 |
Cow position: | chr13:21839650-21839378 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 193 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-403 |
Cow position: | chr13:15519958-15519677 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 204 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 118, 123 |
Conread position: | 121-404 |
Cow position: | chr13:60466878-60467155 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 199 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-405 |
Cow position: | chr13:3056586-3056304 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 199 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr13:17309022-17309304 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr13:32984801-32984512 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 208 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 251, 18 |
Conread position: | 121-405 |
Cow position: | chr13:34424311-34424593 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 204 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr13:47229455-47229170 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 208 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr13:49974226-49974508 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 199 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr13:52646326-52646044 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 204 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 122-399 |
Cow position: | chr13:50110002-50110275 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 193 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 103, 17 |
Conread position: | 122-403 |
Cow position: | chr13:31611756-31611478 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 17 |
Conread position: | 123-399 |
Cow position: | chr13:60700114-60699836 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 188 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 96, 6 |
Conread position: | 125-389 |
Cow position: | chr13:19441122-19441380 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 184 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 68, 14 |
Conread position: | 127-403 |
Cow position: | chr13:6667575-6667303 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 12 |
Conread position: | 129-275 |
Cow position: | chr13:48358265-48358411 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 144, 10 |
Conread position: | 129-348 |
Cow position: | chr13:34765891-34765685 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-376 |
Cow position: | chr13:47567775-47568016 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 162 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 129-381 |
Cow position: | chr13:35757829-35758079 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 201, 0 |
Conread position: | 129-404 |
Cow position: | chr13:34325002-34324725 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 10 |
Conread position: | 132-368 |
Cow position: | chr13:30238798-30239030 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 132-380 |
Cow position: | chr13:20541484-20541240 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 133-378 |
Cow position: | chr13:57024259-57024501 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 172 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 134-360 |
Cow position: | chr13:34910304-34910083 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 167 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 135-404 |
Cow position: | chr13:25692245-25692512 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 195 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 10, 165 |
Conread position: | 139-390 |
Cow position: | chr13:15450550-15450316 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 139-396 |
Cow position: | chr13:43982521-43982279 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 180 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 139-405 |
Cow position: | chr13:11798144-11797888 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 192 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 261, 176 |
Conread position: | 139-405 |
Cow position: | chr13:26844595-26844846 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 139-405 |
Cow position: | chr13:42218358-42218081 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 193 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 86, 77 |
Conread position: | 140-399 |
Cow position: | chr13:17331194-17330938 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 171 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 223, 21 |
Conread position: | 149-396 |
Cow position: | chr13:28670686-28670443 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 65, 55 |
Conread position: | 152-379 |
Cow position: | chr13:14178258-14178034 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 155 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 72, 56 |
Conread position: | 158-398 |
Cow position: | chr13:30654795-30654557 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 172, 0 |
Conread position: | 165-399 |
Cow position: | chr13:8797194-8796968 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 156 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 165-405 |
Cow position: | chr13:21696844-21697083 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 180 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 60, 51 |
Conread position: | 166-379 |
Cow position: | chr13:5625412-5625199 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 89, 166 |
Conread position: | 174-424 |
Cow position: | chr13:34154159-34153913 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 183 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 237, 156 |
Conread position: | 183-405 |
Cow position: | chr13:34938075-34938294 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 208, 147 |
Conread position: | 197-396 |
Cow position: | chr13:35031748-35031944 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 227-399 |
Cow position: | chr13:31733235-31733065 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 237-398 |
Cow position: | chr13:14402433-14402275 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 248-400 |
Cow position: | chr13:43590007-43590156 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.