Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               114-403
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 209
               

               Conread position:
               118-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               256, 31
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-390
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               120-392
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-393
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-396
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-402
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 19
               

               Conread position:
               120-405
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               120-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               121-308
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               121-370
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               121-379
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               181, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-404
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-404
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               121-404
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               122-397
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               122-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               122-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               276, 17
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               274, 6
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               277, 6
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               125-398
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               250, 69
               

               Conread position:
               125-398
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               125-402
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               248, 205
               

               Conread position:
               127-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               175, 12
               

               Conread position:
               127-390
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               129-332
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-332
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               129-369
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               129-377
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               154, 10
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               242, 10
               

               Conread position:
               129-396
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               214, 10
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               130-399
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               132-399
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               133-330
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               133-376
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               133-392
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               108, 198
               

               Conread position:
               133-405
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               259, 73
               

               Conread position:
               134-326
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               134-397
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               134-399
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 24
               

               Conread position:
               134-399
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               249, 66
               

               Conread position:
               134-402
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               134-404
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               134-405
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 206
               

               Conread position:
               139-309
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               139-381
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               131, 39
               

               Conread position:
               139-399
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 79
               

               Conread position:
               139-400
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               139-400
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 66
               

               Conread position:
               140-382
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               141-323
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-404
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 78
               

               Conread position:
               142-396
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 149
               

               Conread position:
               151-403
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               245, 179
               

               Conread position:
               152-390
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               73, 64
               

               Conread position:
               152-405
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               73, 64
               

               Conread position:
               154-398
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 125
               

               Conread position:
               159-390
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               213, 139
               

               Conread position:
               163-363
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 116
               

               Conread position:
               173-396
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               174-405
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               51, 47
               

               Conread position:
               179-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               181-399
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               184-398
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               192-381
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               211-400
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               217-404
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               226-405
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               155, 6
               

               Conread position:
               234-398
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               138, 32
               

               Conread position:
               266-396
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               289-406
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 7
               
Show alignments to all cow chromosomes.