Cow genome map

Conread name: Lym2-sn66_E02.f

Conread position: 97-401
Cow position: chr16:25342026-25342330 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 108-300
Cow position: chr16:49256152-49255960 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 114-362
Cow position: chr16:20201991-20202237 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 26, 39

Conread position: 118-398
Cow position: chr16:23535807-23535535 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 118-404
Cow position: chr16:29047105-29047386 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 11

Conread position: 119-332
Cow position: chr16:25255550-25255755 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 119-405
Cow position: chr16:10375515-10375235 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 10

Conread position: 119-405
Cow position: chr16:28170288-28169995 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 10

Conread position: 120-353
Cow position: chr16:41166688-41166458 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr16:1432269-1432546 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 19

Conread position: 120-398
Cow position: chr16:1567370-1567097 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 19

Conread position: 120-398
Cow position: chr16:2410884-2410610 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr16:8816024-8815749 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr16:12537842-12537571 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr16:25441709-25441986 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 19

Conread position: 120-398
Cow position: chr16:26663832-26664108 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 19

Conread position: 120-398
Cow position: chr16:28471019-28470745 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr16:40296094-40295819 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 19

Conread position: 120-398
Cow position: chr16:43897193-43896919 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-400
Cow position: chr16:25457381-25457104 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 19

Conread position: 120-403
Cow position: chr16:2727205-2726926 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:5484813-5485093 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:7676372-7676095 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:14665730-14665445 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 120-403
Cow position: chr16:15185154-15185434 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:15476924-15477204 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 19

Conread position: 120-403
Cow position: chr16:15493585-15493866 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 19

Conread position: 120-403
Cow position: chr16:23252352-23252075 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:27733709-27733436 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr16:31591837-31591553 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 19

Conread position: 120-403
Cow position: chr16:37481045-37480776 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 198, 19

Conread position: 121-345
Cow position: chr16:4302257-4302035 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 104, 18

Conread position: 121-378
Cow position: chr16:11283393-11283648 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 18

Conread position: 121-379
Cow position: chr16:28377301-28377556 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 104, 18

Conread position: 121-381
Cow position: chr16:41162988-41162732 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 104, 30

Conread position: 121-390
Cow position: chr16:4305180-4304915 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chr16:46707283-46707009 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr16:5661927-5662209 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr16:21185698-21185979 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr16:25188731-25189013 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 104, 18

Conread position: 122-390
Cow position: chr16:4478900-4478634 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 208, 0

Conread position: 122-398
Cow position: chr16:406949-406683 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 123-283
Cow position: chr16:23808521-23808676 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 108

Conread position: 123-315
Cow position: chr16:47473586-47473776 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 123-390
Cow position: chr16:25171433-25171698 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 121

Conread position: 123-392
Cow position: chr16:25258031-25258302 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 16

Conread position: 123-397
Cow position: chr16:42736306-42736047 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 6, 0

Conread position: 123-405
Cow position: chr16:18498206-18497920 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 128

Conread position: 123-405
Cow position: chr16:34530398-34530688 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 80, 16

Conread position: 123-405
Cow position: chr16:37455928-37455655 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 30

Conread position: 124-374
Cow position: chr16:39367294-39367044 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 163, 15

Conread position: 129-277
Cow position: chr16:49234569-49234425 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 129-369
Cow position: chr16:51084230-51084467 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 129-374
Cow position: chr16:28437296-28437058 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 10

Conread position: 129-381
Cow position: chr16:16271048-16270800 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 129-402
Cow position: chr16:45798653-45798920 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 193, 0

Conread position: 129-404
Cow position: chr16:23670788-23671061 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 269, 10

Conread position: 129-404
Cow position: chr16:25085708-25085978 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 132-401
Cow position: chr16:25738775-25739026 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 134-319
Cow position: chr16:30049580-30049766 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 162

Conread position: 134-381
Cow position: chr16:23802017-23801776 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 134-405
Cow position: chr16:1860317-1860583 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 200

Conread position: 134-405
Cow position: chr16:51405846-51405589 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 42

Conread position: 139-398
Cow position: chr16:2483039-2482781 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 191

Conread position: 139-398
Cow position: chr16:29034151-29034409 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 74

Conread position: 158-399
Cow position: chr16:27593625-27593863 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 58

Conread position: 160-403
Cow position: chr16:10565636-10565397 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 8

Conread position: 172-308
Cow position: chr16:49221799-49221663 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 186-400
Cow position: chr16:337314-337524 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 0

Conread position: 191-403
Cow position: chr16:56916915-56916704 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 52

Conread position: 194-405
Cow position: chr16:3089048-3088837 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 195-400
Cow position: chr16:10438408-10438610 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 209-403
Cow position: chr16:26105891-26105702 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 25

Conread position: 222-403
Cow position: chr16:23983480-23983658 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 229-398
Cow position: chr16:15567444-15567611 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 229-403
Cow position: chr16:837502-837682 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 106

Conread position: 265-398
Cow position: chr16:7464053-7464183 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 277-405
Cow position: chr16:49234393-49234267 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 57

Show alignments to all cow chromosomes.