Cow genome map
Conread name: | Lym2-sn66_E02.f |
Conread position: | 97-401 |
Cow position: | chr16:25342026-25342330 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 44 |
Conread position: | 108-300 |
Cow position: | chr16:49256152-49255960 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-362 |
Cow position: | chr16:20201991-20202237 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 184 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 118-398 |
Cow position: | chr16:23535807-23535535 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 118-404 |
Cow position: | chr16:29047105-29047386 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 151, 11 |
Conread position: | 119-332 |
Cow position: | chr16:25255550-25255755 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 119-405 |
Cow position: | chr16:10375515-10375235 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 203 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 109, 10 |
Conread position: | 119-405 |
Cow position: | chr16:28170288-28169995 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 215 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 106, 10 |
Conread position: | 120-353 |
Cow position: | chr16:41166688-41166458 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr16:1432269-1432546 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 19 |
Conread position: | 120-398 |
Cow position: | chr16:1567370-1567097 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 19 |
Conread position: | 120-398 |
Cow position: | chr16:2410884-2410610 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr16:8816024-8815749 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr16:12537842-12537571 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr16:25441709-25441986 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 19 |
Conread position: | 120-398 |
Cow position: | chr16:26663832-26664108 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 19 |
Conread position: | 120-398 |
Cow position: | chr16:28471019-28470745 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr16:40296094-40295819 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 19 |
Conread position: | 120-398 |
Cow position: | chr16:43897193-43896919 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-400 |
Cow position: | chr16:25457381-25457104 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 19 |
Conread position: | 120-403 |
Cow position: | chr16:2727205-2726926 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 200 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:5484813-5485093 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:7676372-7676095 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:14665730-14665445 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 120-403 |
Cow position: | chr16:15185154-15185434 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:15476924-15477204 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 19 |
Conread position: | 120-403 |
Cow position: | chr16:15493585-15493866 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 19 |
Conread position: | 120-403 |
Cow position: | chr16:23252352-23252075 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:27733709-27733436 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 203 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-403 |
Cow position: | chr16:31591837-31591553 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 19 |
Conread position: | 120-403 |
Cow position: | chr16:37481045-37480776 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 202 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 198, 19 |
Conread position: | 121-345 |
Cow position: | chr16:4302257-4302035 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-378 |
Cow position: | chr16:11283393-11283648 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 181 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-379 |
Cow position: | chr16:28377301-28377556 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 187 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-381 |
Cow position: | chr16:41162988-41162732 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 104, 30 |
Conread position: | 121-390 |
Cow position: | chr16:4305180-4304915 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 188 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-399 |
Cow position: | chr16:46707283-46707009 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 198 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr16:5661927-5662209 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr16:21185698-21185979 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 202 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr16:25188731-25189013 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 122-390 |
Cow position: | chr16:4478900-4478634 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 208, 0 |
Conread position: | 122-398 |
Cow position: | chr16:406949-406683 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 200 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 123-283 |
Cow position: | chr16:23808521-23808676 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 15, 108 |
Conread position: | 123-315 |
Cow position: | chr16:47473586-47473776 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 131 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 123-390 |
Cow position: | chr16:25171433-25171698 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 179 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 109, 121 |
Conread position: | 123-392 |
Cow position: | chr16:25258031-25258302 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 199 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 150, 16 |
Conread position: | 123-397 |
Cow position: | chr16:42736306-42736047 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 196 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 123-405 |
Cow position: | chr16:18498206-18497920 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 15, 128 |
Conread position: | 123-405 |
Cow position: | chr16:34530398-34530688 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 216 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 80, 16 |
Conread position: | 123-405 |
Cow position: | chr16:37455928-37455655 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 197 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 15, 30 |
Conread position: | 124-374 |
Cow position: | chr16:39367294-39367044 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 163, 15 |
Conread position: | 129-277 |
Cow position: | chr16:49234569-49234425 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-369 |
Cow position: | chr16:51084230-51084467 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 177 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-374 |
Cow position: | chr16:28437296-28437058 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 163 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 85, 10 |
Conread position: | 129-381 |
Cow position: | chr16:16271048-16270800 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-402 |
Cow position: | chr16:45798653-45798920 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 187 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 129-404 |
Cow position: | chr16:23670788-23671061 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 269, 10 |
Conread position: | 129-404 |
Cow position: | chr16:25085708-25085978 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 10 |
Conread position: | 132-401 |
Cow position: | chr16:25738775-25739026 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 179 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 134-319 |
Cow position: | chr16:30049580-30049766 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 57, 162 |
Conread position: | 134-381 |
Cow position: | chr16:23802017-23801776 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 175 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 134-405 |
Cow position: | chr16:1860317-1860583 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 200 |
Conread position: | 134-405 |
Cow position: | chr16:51405846-51405589 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 181, 42 |
Conread position: | 139-398 |
Cow position: | chr16:2483039-2482781 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 191 |
Conread position: | 139-398 |
Cow position: | chr16:29034151-29034409 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 74 |
Conread position: | 158-399 |
Cow position: | chr16:27593625-27593863 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 171 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 67, 58 |
Conread position: | 160-403 |
Cow position: | chr16:10565636-10565397 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 163 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 57, 8 |
Conread position: | 172-308 |
Cow position: | chr16:49221799-49221663 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 102 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-400 |
Cow position: | chr16:337314-337524 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 191-403 |
Cow position: | chr16:56916915-56916704 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 9, 52 |
Conread position: | 194-405 |
Cow position: | chr16:3089048-3088837 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 195-400 |
Cow position: | chr16:10438408-10438610 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 209-403 |
Cow position: | chr16:26105891-26105702 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 146 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 75, 25 |
Conread position: | 222-403 |
Cow position: | chr16:23983480-23983658 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 229-398 |
Cow position: | chr16:15567444-15567611 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 229-403 |
Cow position: | chr16:837502-837682 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 39, 106 |
Conread position: | 265-398 |
Cow position: | chr16:7464053-7464183 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 277-405 |
Cow position: | chr16:49234393-49234267 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 57 |
Show alignments to all cow chromosomes.