Cow genome map
Conread name: | Lym2-sn66_E02.f |
Conread position: | 112-405 |
Cow position: | chr17:20081222-20080937 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 108 |
Conread position: | 114-395 |
Cow position: | chr17:5227267-5227548 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 210 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 100, 25 |
Conread position: | 114-405 |
Cow position: | chr17:11783491-11783776 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 205 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 111, 25 |
Conread position: | 116-405 |
Cow position: | chr17:43989147-43989436 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 201 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 76, 23 |
Conread position: | 118-398 |
Cow position: | chr17:40805463-40805737 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 202 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 118-403 |
Cow position: | chr17:15324483-15324764 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 262, 11 |
Conread position: | 119-398 |
Cow position: | chr17:6260510-6260787 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 20 |
Conread position: | 119-406 |
Cow position: | chr17:34156773-34157056 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 10 |
Conread position: | 120-380 |
Cow position: | chr17:14894815-14895067 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr17:2580276-2580549 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 263, 19 |
Conread position: | 120-398 |
Cow position: | chr17:16856864-16856592 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr17:19268175-19267901 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-398 |
Cow position: | chr17:24029350-24029076 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 120-404 |
Cow position: | chr17:11087068-11086785 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 19 |
Conread position: | 121-356 |
Cow position: | chr17:20722274-20722505 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-368 |
Cow position: | chr17:2247414-2247171 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-381 |
Cow position: | chr17:15142703-15142445 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 182 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 181, 98 |
Conread position: | 121-398 |
Cow position: | chr17:3642178-3641906 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 121-398 |
Cow position: | chr17:15156314-15156044 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 188 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 121-399 |
Cow position: | chr17:8209763-8210041 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 199 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-399 |
Cow position: | chr17:23323798-23323519 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 114, 18 |
Conread position: | 121-399 |
Cow position: | chr17:24782813-24783088 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 191 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 185, 18 |
Conread position: | 121-399 |
Cow position: | chr17:31767386-31767112 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 197 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr17:2262759-2263046 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 211 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 89, 18 |
Conread position: | 121-405 |
Cow position: | chr17:3655639-3655358 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 196 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr17:6120367-6120651 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 201 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 251, 20 |
Conread position: | 121-405 |
Cow position: | chr17:14216378-14216092 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 202 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 121-405 |
Cow position: | chr17:15436447-15436729 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 203 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 122-398 |
Cow position: | chr17:6069210-6069483 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 17 |
Conread position: | 123-323 |
Cow position: | chr17:14307195-14306998 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 138 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 15, 62 |
Conread position: | 123-376 |
Cow position: | chr17:1787284-1787030 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 209 |
Conread position: | 123-396 |
Cow position: | chr17:38874284-38874557 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 186 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 124, 118 |
Conread position: | 123-399 |
Cow position: | chr17:18194467-18194738 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 190 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 15, 62 |
Conread position: | 123-400 |
Cow position: | chr17:20488596-20488871 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 200 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 22, 62 |
Conread position: | 129-379 |
Cow position: | chr17:227649-227403 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 171 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-396 |
Cow position: | chr17:20403087-20403345 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 190 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 144, 10 |
Conread position: | 129-398 |
Cow position: | chr17:250826-251088 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 196 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 129-399 |
Cow position: | chr17:4060762-4061025 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 129-403 |
Cow position: | chr17:20087087-20086821 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 201 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 244, 10 |
Conread position: | 134-378 |
Cow position: | chr17:11025847-11025607 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 139-396 |
Cow position: | chr17:54782-54532 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 181 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 176, 0 |
Conread position: | 139-396 |
Cow position: | chr17:4942057-4941805 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 182 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 139-399 |
Cow position: | chr17:1657176-1656921 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 185 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 158, 22 |
Conread position: | 139-403 |
Cow position: | chr17:15851364-15851622 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 258, 93 |
Conread position: | 139-405 |
Cow position: | chr17:20099805-20099535 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 191 |
Conread position: | 140-403 |
Cow position: | chr17:1880771-1881034 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 193 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 232, 137 |
Conread position: | 141-398 |
Cow position: | chr17:151224-150968 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 137 |
Conread position: | 141-398 |
Cow position: | chr17:1704018-1703765 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 187 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 99, 89 |
Conread position: | 141-405 |
Cow position: | chr17:14040363-14040107 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 187 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 152-400 |
Cow position: | chr17:3708104-3707847 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 173 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 45, 143 |
Conread position: | 157-398 |
Cow position: | chr17:16121830-16121614 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 216, 29 |
Conread position: | 167-404 |
Cow position: | chr17:8202671-8202900 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 169 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 22, 62 |
Conread position: | 176-405 |
Cow position: | chr17:13705252-13705481 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 134, 156 |
Conread position: | 188-400 |
Cow position: | chr17:239064-239279 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 84, 90 |
Conread position: | 192-399 |
Cow position: | chr17:6611764-6611560 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 204-405 |
Cow position: | chr17:15371962-15372164 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 169, 126 |
Show alignments to all cow chromosomes.