Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               112-405
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               114-395
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               114-405
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               116-405
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               118-403
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               262, 11
               

               Conread position:
               119-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 20
               

               Conread position:
               119-406
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               120-380
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-404
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 19
               

               Conread position:
               121-356
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-368
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               181, 98
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               185, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               251, 20
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 17
               

               Conread position:
               123-323
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               123-376
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 209
               

               Conread position:
               123-396
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 118
               

               Conread position:
               123-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               123-400
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-396
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               144, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               244, 10
               

               Conread position:
               134-378
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               139-396
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               139-396
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               139-399
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               158, 22
               

               Conread position:
               139-403
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               258, 93
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 191
               

               Conread position:
               140-403
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               232, 137
               

               Conread position:
               141-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 137
               

               Conread position:
               141-398
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               141-405
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               152-400
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 143
               

               Conread position:
               157-398
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               216, 29
               

               Conread position:
               167-404
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               176-405
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               134, 156
               

               Conread position:
               188-400
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 90
               

               Conread position:
               192-399
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               204-405
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               169, 126
               
Show alignments to all cow chromosomes.