Cow genome map
| Conread name: | Lym2-sn66_E02.f |
| Conread position: | 114-378 |
| Cow position: | chr18:33269681-33269939 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 118-353 |
| Cow position: | chr18:25351619-25351849 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 118-394 |
| Cow position: | chr18:51481750-51482018 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 118-398 |
| Cow position: | chr18:41839945-41839671 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 119-405 |
| Cow position: | chr18:11274242-11273959 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 120-370 |
| Cow position: | chr18:33750876-33751120 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-381 |
| Cow position: | chr18:27988054-27988312 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-394 |
| Cow position: | chr18:14416848-14417118 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-396 |
| Cow position: | chr18:16175751-16175481 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:14131256-14131530 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:16089004-16089273 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:23798512-23798786 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:27837447-27837173 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:32653080-32653355 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr18:40479252-40479530 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 19 |
| Conread position: | 120-399 |
| Cow position: | chr18:36509202-36509480 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 19 |
| Conread position: | 120-403 |
| Cow position: | chr18:28973021-28972740 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 19 |
| Conread position: | 120-403 |
| Cow position: | chr18:37506824-37507101 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 121-302 |
| Cow position: | chr18:55088056-55087881 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-379 |
| Cow position: | chr18:26245316-26245574 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 121-398 |
| Cow position: | chr18:4946922-4947188 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 121-398 |
| Cow position: | chr18:52651775-52652046 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 121-399 |
| Cow position: | chr18:51661205-51661479 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr18:33952716-33952435 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr18:51342550-51342832 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 123-363 |
| Cow position: | chr18:54271365-54271597 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 125-315 |
| Cow position: | chr18:33336744-33336924 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 125-403 |
| Cow position: | chr18:51275172-51274902 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 127-398 |
| Cow position: | chr18:29237789-29238041 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 129-398 |
| Cow position: | chr18:32768530-32768794 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 133-332 |
| Cow position: | chr18:51462214-51462015 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 85 |
| Conread position: | 133-398 |
| Cow position: | chr18:54023259-54022995 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 192 |
| Conread position: | 134-405 |
| Cow position: | chr18:16079543-16079816 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 139-379 |
| Cow position: | chr18:54170654-54170416 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 90 |
| Conread position: | 141-405 |
| Cow position: | chr18:47742387-47742648 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 250, 54 |
| Conread position: | 161-405 |
| Cow position: | chr18:54005268-54005026 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 238, 58 |
| Conread position: | 164-399 |
| Cow position: | chr18:19353265-19353498 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 227-405 |
| Cow position: | chr18:45946878-45946701 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 172, 108 |
Show alignments to all cow chromosomes.