Cow genome map

Conread name: Lym2-sn66_E02.f

Conread position: 114-405
Cow position: chr19:39155-39448 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 219

Conread position: 118-399
Cow position: chr19:773463-773742 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 107, 21

Conread position: 118-403
Cow position: chr19:39184671-39184390 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 11

Conread position: 119-405
Cow position: chr19:32211207-32210914 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 109, 10

Conread position: 120-379
Cow position: chr19:4386491-4386744 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chr19:28580791-28580521 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 236, 19

Conread position: 120-399
Cow position: chr19:33942472-33942752 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 171, 19

Conread position: 120-403
Cow position: chr19:438569-438290 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 276, 19

Conread position: 120-403
Cow position: chr19:33874293-33874573 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 121-315
Cow position: chr19:6548876-6549067 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 121-378
Cow position: chr19:5900634-5900380 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-378
Cow position: chr19:52150965-52150712 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 18

Conread position: 121-396
Cow position: chr19:32193882-32194155 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 104, 18

Conread position: 121-398
Cow position: chr19:40886875-40886604 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 18

Conread position: 121-403
Cow position: chr19:12773985-12774262 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 19

Conread position: 121-405
Cow position: chr19:7342935-7343217 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 278, 18

Conread position: 121-405
Cow position: chr19:43144578-43144862 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 20

Conread position: 122-399
Cow position: chr19:2273514-2273243 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 122-403
Cow position: chr19:39391378-39391657 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 17

Conread position: 123-324
Cow position: chr19:27051636-27051440 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 98, 15

Conread position: 125-402
Cow position: chr19:3138803-3139078 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 14

Conread position: 129-288
Cow position: chr19:32204019-32204178 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 10

Conread position: 129-400
Cow position: chr19:5028195-5027926 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 10

Conread position: 129-405
Cow position: chr19:135916-135643 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 143, 28

Conread position: 129-405
Cow position: chr19:28594427-28594701 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 10

Conread position: 134-398
Cow position: chr19:347447-347190 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 172, 118

Conread position: 134-402
Cow position: chr19:9707249-9706992 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 92, 42

Conread position: 135-398
Cow position: chr19:342100-342361 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 195, 0

Conread position: 139-405
Cow position: chr19:28405822-28405554 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 191

Conread position: 140-396
Cow position: chr19:1588327-1588073 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 101

Conread position: 140-398
Cow position: chr19:7489231-7489491 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 190

Conread position: 140-405
Cow position: chr19:50723426-50723703 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 24

Conread position: 152-308
Cow position: chr19:256131-256287 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 40

Conread position: 157-398
Cow position: chr19:11522262-11522024 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 173, 0

Conread position: 158-377
Cow position: chr19:173137-173359 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 121, 178

Conread position: 162-400
Cow position: chr19:55926537-55926307 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 171-398
Cow position: chr19:204898-205124 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 211, 159

Conread position: 176-405
Cow position: chr19:20105647-20105875 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 40

Conread position: 177-368
Cow position: chr19:39667817-39667636 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 36

Conread position: 184-398
Cow position: chr19:5729803-5730011 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 254-398
Cow position: chr19:892624-892482 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.