Cow genome map
| Conread name: | Lym2-sn66_E02.f |
| Conread position: | 118-403 |
| Cow position: | chr20:35125322-35125601 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 261, 11 |
| Conread position: | 120-289 |
| Cow position: | chr20:7113361-7113197 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-344 |
| Cow position: | chr20:21915146-21915366 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-390 |
| Cow position: | chr20:28564763-28564497 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 120-394 |
| Cow position: | chr20:17661249-17660976 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 211 |
| Conread position: | 120-397 |
| Cow position: | chr20:29949330-29949603 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr20:23468836-23468562 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr20:28161646-28161923 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 250, 19 |
| Conread position: | 120-403 |
| Cow position: | chr20:5535761-5536040 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 261, 19 |
| Conread position: | 120-403 |
| Cow position: | chr20:12437880-12437601 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 19 |
| Conread position: | 120-403 |
| Cow position: | chr20:15097049-15096773 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 271, 19 |
| Conread position: | 120-403 |
| Cow position: | chr20:27870030-27870311 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 19 |
| Conread position: | 121-301 |
| Cow position: | chr20:8992386-8992210 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 121-396 |
| Cow position: | chr20:23799710-23799982 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 121-398 |
| Cow position: | chr20:15292830-15293102 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-399 |
| Cow position: | chr20:38351501-38351775 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr20:8973991-8973708 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 121-405 |
| Cow position: | chr20:15066312-15066590 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 18 |
| Conread position: | 121-405 |
| Cow position: | chr20:19438743-19439025 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 122-403 |
| Cow position: | chr20:12569349-12569629 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 17 |
| Conread position: | 123-275 |
| Cow position: | chr20:37442468-37442315 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 123-380 |
| Cow position: | chr20:22207949-22208200 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 123-396 |
| Cow position: | chr20:10101873-10101607 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 123-404 |
| Cow position: | chr20:19355591-19355875 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 123-405 |
| Cow position: | chr20:8216346-8216624 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 277, 16 |
| Conread position: | 123-405 |
| Cow position: | chr20:14870120-14869850 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 125-382 |
| Cow position: | chr20:872130-871889 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 129-400 |
| Cow position: | chr20:18314511-18314244 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 132-393 |
| Cow position: | chr20:13433762-13433508 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 134-397 |
| Cow position: | chr20:10854518-10854243 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 130, 60 |
| Conread position: | 134-398 |
| Cow position: | chr20:21394767-21395032 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 139-390 |
| Cow position: | chr20:823604-823853 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 233, 104 |
| Conread position: | 139-398 |
| Cow position: | chr20:16105695-16105438 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 139-405 |
| Cow position: | chr20:13679199-13678940 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 235, 43 |
| Conread position: | 144-400 |
| Cow position: | chr20:24616018-24615763 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 22 |
| Conread position: | 145-403 |
| Cow position: | chr20:1742712-1742961 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 154-403 |
| Cow position: | chr20:31498237-31497990 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 157-374 |
| Cow position: | chr20:5465911-5466121 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 248-360 |
| Cow position: | chr20:9521392-9521282 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.