Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               118-381
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               199, 11
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               278, 10
               

               Conread position:
               119-414
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               118, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               120-404
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               277, 19
               

               Conread position:
               121-375
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               278, 18
               

               Conread position:
               122-403
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               122-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               123-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 178
               

               Conread position:
               125-396
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               125-400
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               129-328
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 18
               

               Conread position:
               129-381
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               252, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 202
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               254, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               132-292
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               132-332
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               132-405
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 133
               

               Conread position:
               134-396
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               134-405
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               136-394
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               215, 14
               

               Conread position:
               139-324
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-346
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-378
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               139-381
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               139-399
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 193
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 43
               

               Conread position:
               149-369
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               154-398
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               164-332
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               165-382
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               182, 120
               

               Conread position:
               169-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               228, 35
               

               Conread position:
               176-405
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               182-405
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               194, 11
               

               Conread position:
               203-398
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               204-398
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               169, 124
               

               Conread position:
               219-398
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               227-393
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               227-398
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               243-405
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               132, 87
               

               Conread position:
               248-399
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 0
               
Show alignments to all cow chromosomes.