Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               111-405
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               112-332
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 193
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               186, 10
               

               Conread position:
               120-373
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               201, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 21
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               121-303
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-327
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-332
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               121-377
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-378
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-397
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-397
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               276, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               121-406
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               122-381
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               122-381
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               251, 17
               

               Conread position:
               123-399
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               123-402
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               127-398
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 12
               

               Conread position:
               129-367
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-396
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               249, 10
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               245, 12
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               268, 10
               

               Conread position:
               139-332
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               159, 11
               

               Conread position:
               139-355
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               163, 79
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               197, 49
               

               Conread position:
               140-405
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               141-393
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               141-398
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               141-403
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               144-405
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               176, 242
               

               Conread position:
               155-398
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               217, 175
               

               Conread position:
               159-398
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               173-380
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               174-317
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               180-350
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               181-381
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               194-403
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               200-381
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               274-398
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               109, 56
               
Show alignments to all cow chromosomes.