Cow genome map
| Conread name: | Lym2-sn66_E02.f |
| Conread position: | 118-398 |
| Cow position: | chr23:28025438-28025703 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 262, 11 |
| Conread position: | 118-399 |
| Cow position: | chr23:4639853-4639581 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 119-405 |
| Cow position: | chr23:2312472-2312190 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 120-381 |
| Cow position: | chr23:22146529-22146272 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 120-381 |
| Cow position: | chr23:28367753-28367506 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-398 |
| Cow position: | chr23:965728-965452 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 120-398 |
| Cow position: | chr23:2576194-2576469 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 19 |
| Conread position: | 120-398 |
| Cow position: | chr23:2717162-2717430 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 120-398 |
| Cow position: | chr23:2758656-2758931 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 120-398 |
| Cow position: | chr23:4817790-4818063 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 120-398 |
| Cow position: | chr23:15177842-15178118 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 19 |
| Conread position: | 120-398 |
| Cow position: | chr23:20155450-20155180 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 253, 19 |
| Conread position: | 120-398 |
| Cow position: | chr23:36030604-36030334 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-400 |
| Cow position: | chr23:4889454-4889729 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 186, 19 |
| Conread position: | 120-403 |
| Cow position: | chr23:3880313-3880037 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-403 |
| Cow position: | chr23:15219135-15218852 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 120-403 |
| Cow position: | chr23:15526337-15526618 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 120-404 |
| Cow position: | chr23:19490309-19490592 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 121-332 |
| Cow position: | chr23:4360578-4360787 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 121-371 |
| Cow position: | chr23:28218061-28218300 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-374 |
| Cow position: | chr23:618690-618446 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-381 |
| Cow position: | chr23:19949830-19949573 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-390 |
| Cow position: | chr23:27400276-27400543 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 121-398 |
| Cow position: | chr23:1013016-1012749 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 121-398 |
| Cow position: | chr23:2026309-2026039 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 121-405 |
| Cow position: | chr23:23171269-23171551 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 122-345 |
| Cow position: | chr23:28914166-28914385 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 122-396 |
| Cow position: | chr23:27971311-27971574 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 250, 17 |
| Conread position: | 129-356 |
| Cow position: | chr23:7336897-7337123 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 129-387 |
| Cow position: | chr23:11077431-11077176 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 129-398 |
| Cow position: | chr23:4510845-4511099 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 129-398 |
| Cow position: | chr23:25683158-25682898 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-400 |
| Cow position: | chr23:19450891-19451154 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-400 |
| Cow position: | chr23:38581515-38581770 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 189, 45 |
| Conread position: | 129-403 |
| Cow position: | chr23:16498451-16498191 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 129-405 |
| Cow position: | chr23:3706898-3707174 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 132-356 |
| Cow position: | chr23:14973790-14973563 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 199 |
| Conread position: | 134-361 |
| Cow position: | chr23:15041962-15041739 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 134-392 |
| Cow position: | chr23:1401745-1401498 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 182, 78 |
| Conread position: | 134-394 |
| Cow position: | chr23:29451559-29451307 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 134-403 |
| Cow position: | chr23:11779569-11779833 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 264, 23 |
| Conread position: | 139-398 |
| Cow position: | chr23:14964257-14964004 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 139-405 |
| Cow position: | chr23:2341863-2342130 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 134, 148 |
| Conread position: | 139-405 |
| Cow position: | chr23:2781182-2780918 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 193 |
| Conread position: | 139-405 |
| Cow position: | chr23:16614649-16614382 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 234, 53 |
| Conread position: | 140-397 |
| Cow position: | chr23:5873791-5873537 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 142-381 |
| Cow position: | chr23:28078441-28078665 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 149-373 |
| Cow position: | chr23:14778365-14778149 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 57 |
| Conread position: | 157-378 |
| Cow position: | chr23:948986-948773 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 164-400 |
| Cow position: | chr23:29402908-29402676 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 164-405 |
| Cow position: | chr23:8286842-8287082 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 134 |
| Conread position: | 165-403 |
| Cow position: | chr23:1956715-1956945 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 216, 135 |
| Conread position: | 201-396 |
| Cow position: | chr23:26159878-26159685 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 243-403 |
| Cow position: | chr23:2794366-2794207 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 87 |
Show alignments to all cow chromosomes.