Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               108-398
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 208
               

               Conread position:
               108-398
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               244, 10
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               118-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               119-371
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               119-388
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               119-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               119-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               119-405
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               120-323
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-359
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               120-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-382
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               120-396
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 19
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               120-400
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-402
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               278, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 19
               

               Conread position:
               120-405
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               121-369
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-386
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-396
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               182, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               278, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               122-381
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               122-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               123-383
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 22
               

               Conread position:
               123-399
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               189, 44
               

               Conread position:
               129-263
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-386
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 10
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 10
               

               Conread position:
               129-402
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               129-404
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 10
               

               Conread position:
               129-406
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 10
               

               Conread position:
               130-399
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               132-381
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               132-399
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               134-396
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               238, 60
               

               Conread position:
               134-403
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               249, 155
               

               Conread position:
               139-357
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               139-378
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 11
               

               Conread position:
               139-403
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 42
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               145-373
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               166-405
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               175-405
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               147, 164
               

               Conread position:
               186-379
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               186-398
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               191-404
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               191-405
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               165, 18
               

               Conread position:
               213-398
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               174, 30
               

               Conread position:
               226-394
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 104
               

               Conread position:
               227-405
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               172, 71
               

               Conread position:
               247-398
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               140, 87
               

               Conread position:
               254-399
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.