Cow genome map

Conread name: Lym2-sn66_E02.f

Conread position: 114-402
Cow position: chr8:12087562-12087843 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 114-405
Cow position: chr8:6064766-6064476 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 111, 25

Conread position: 116-409
Cow position: chr8:28878087-28877801 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 118-398
Cow position: chr8:17312040-17312319 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 265, 11

Conread position: 119-398
Cow position: chr8:14927862-14927590 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 119-400
Cow position: chr8:32437067-32436790 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 106, 10

Conread position: 119-405
Cow position: chr8:2447243-2447525 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 10

Conread position: 120-353
Cow position: chr8:49215458-49215688 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 24

Conread position: 120-378
Cow position: chr8:8911524-8911773 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 120-379
Cow position: chr8:53430086-53430329 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 120-381
Cow position: chr8:23771654-23771906 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 120-391
Cow position: chr8:50930113-50929845 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-393
Cow position: chr8:59261901-59261632 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-396
Cow position: chr8:2170356-2170083 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 19

Conread position: 120-398
Cow position: chr8:3855998-3855735 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr8:8401098-8400823 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 254, 19

Conread position: 120-398
Cow position: chr8:11802838-11803115 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 19

Conread position: 120-398
Cow position: chr8:32318534-32318261 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chr8:33589392-33589668 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 120-398
Cow position: chr8:50287907-50287626 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 27

Conread position: 120-398
Cow position: chr8:60061400-60061674 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chr8:25408747-25409019 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chr8:25523424-25523693 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 120-399
Cow position: chr8:36635482-36635213 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 197, 19

Conread position: 120-399
Cow position: chr8:44243564-44243292 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr8:11832726-11833004 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr8:14590885-14590603 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 19

Conread position: 120-403
Cow position: chr8:24915319-24915038 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 19

Conread position: 120-403
Cow position: chr8:42484933-42485213 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr8:46051204-46051479 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chr8:47661303-47661022 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 19

Conread position: 120-404
Cow position: chr8:29007659-29007935 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 19

Conread position: 120-405
Cow position: chr8:10749382-10749661 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 115, 9

Conread position: 121-379
Cow position: chr8:4785852-4785598 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 185, 18

Conread position: 121-381
Cow position: chr8:1153300-1153037 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 18

Conread position: 121-381
Cow position: chr8:47068795-47068536 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 18

Conread position: 121-396
Cow position: chr8:42419419-42419146 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 18

Conread position: 121-396
Cow position: chr8:50994792-50995058 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 121-398
Cow position: chr8:3785654-3785927 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 121-398
Cow position: chr8:4687420-4687693 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 121-398
Cow position: chr8:5017196-5017470 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 121-398
Cow position: chr8:19330731-19331003 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 121-398
Cow position: chr8:39195192-39194924 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 121-399
Cow position: chr8:8517569-8517291 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 198, 18

Conread position: 121-399
Cow position: chr8:9736256-9736533 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chr8:27579412-27579686 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 18

Conread position: 121-403
Cow position: chr8:7161915-7162194 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 121-405
Cow position: chr8:30891298-30891016 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr8:32041728-32041443 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 262, 18

Conread position: 121-405
Cow position: chr8:32631010-32630727 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr8:34348691-34348973 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr8:37654850-37654563 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 181, 18

Conread position: 121-405
Cow position: chr8:37932108-37932390 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chr8:61906177-61906460 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 104, 18

Conread position: 122-381
Cow position: chr8:2886766-2887021 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 17

Conread position: 122-398
Cow position: chr8:25775656-25775382 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 235, 17

Conread position: 122-405
Cow position: chr8:22128591-22128872 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 276, 17

Conread position: 123-404
Cow position: chr8:30487360-30487087 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 125-381
Cow position: chr8:56883522-56883779 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 125-398
Cow position: chr8:10742649-10742378 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 127-405
Cow position: chr8:51666800-51666522 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 212

Conread position: 129-381
Cow position: chr8:42468689-42468937 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 129-392
Cow position: chr8:11762965-11763226 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 10

Conread position: 129-398
Cow position: chr8:59141349-59141617 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 10

Conread position: 129-400
Cow position: chr8:42158961-42158694 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 129-400
Cow position: chr8:49859735-49859473 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 251, 10

Conread position: 129-403
Cow position: chr8:25417827-25417558 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 10

Conread position: 129-403
Cow position: chr8:48787455-48787724 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 266, 12

Conread position: 129-405
Cow position: chr8:8315435-8315160 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 10

Conread position: 129-405
Cow position: chr8:8556123-8555849 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 10

Conread position: 129-405
Cow position: chr8:42656940-42656676 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 129-406
Cow position: chr8:45692000-45691713 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 12

Conread position: 132-401
Cow position: chr8:38585314-38585048 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 174, 154

Conread position: 134-378
Cow position: chr8:21584260-21584502 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 196, 0

Conread position: 134-398
Cow position: chr8:41644641-41644383 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 99

Conread position: 137-405
Cow position: chr8:22571277-22571010 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 88, 81

Conread position: 139-329
Cow position: chr8:12801164-12801357 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 139-368
Cow position: chr8:20136576-20136349 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 87, 106

Conread position: 139-383
Cow position: chr8:42579544-42579303 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 0

Conread position: 139-404
Cow position: chr8:38606168-38605900 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 139-405
Cow position: chr8:11969248-11968959 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 197, 0

Conread position: 140-382
Cow position: chr8:8308630-8308869 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 233, 184

Conread position: 151-330
Cow position: chr8:19051523-19051701 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 164-409
Cow position: chr8:45450364-45450606 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 167

Conread position: 170-403
Cow position: chr8:50960531-50960311 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 38

Conread position: 171-398
Cow position: chr8:12450085-12450313 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 210, 159

Conread position: 175-398
Cow position: chr8:58185507-58185292 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 176-381
Cow position: chr8:21157719-21157515 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 155

Conread position: 179-398
Cow position: chr8:32647445-32647659 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 185-396
Cow position: chr8:25437399-25437603 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 29

Conread position: 199-405
Cow position: chr8:12801508-12801714 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 184, 129

Conread position: 209-378
Cow position: chr8:47886994-47887159 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 227-399
Cow position: chr8:14631546-14631379 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 227-405
Cow position: chr8:25377105-25377281 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 172, 71

Conread position: 227-405
Cow position: chr8:47454476-47454299 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 103

Show alignments to all cow chromosomes.