Cow genome map


           Conread name:
           Lym2-sn66_E02.f
        

               Conread position:
               109-405
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               112-396
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               115-398
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               118-346
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               118-403
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               118-405
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               119-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               264, 10
               

               Conread position:
               120-359
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-394
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-396
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               253, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               203, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               253, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               120-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-399
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               185, 19
               

               Conread position:
               120-400
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               120-402
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               258, 18
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 19
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-403
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 19
               

               Conread position:
               120-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               277, 19
               

               Conread position:
               121-300
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-330
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               121-380
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               121-381
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-390
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-398
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-404
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               264, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               276, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               276, 18
               

               Conread position:
               121-405
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               122-396
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               76, 212
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               123-404
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               125-381
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               125-390
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               125-400
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               129-355
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               129-379
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-389
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-390
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               129-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               175, 10
               

               Conread position:
               129-401
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               129-402
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               268, 10
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               129-405
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 10
               

               Conread position:
               132-403
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               132-405
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               93, 84
               

               Conread position:
               134-398
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               135-403
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               250, 51
               

               Conread position:
               139-398
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               139-399
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               139-405
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               86, 77
               

               Conread position:
               140-398
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               154-398
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               155-395
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               167-370
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               177-399
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               183-398
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               198, 147
               

               Conread position:
               191-390
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               176, 142
               

               Conread position:
               193-405
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               204, 45
               

               Conread position:
               200-402
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               226-398
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 106
               

               Conread position:
               305-403
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               93, 29
               
Show alignments to all cow chromosomes.