Cow genome map

Conread name: Lym2-sn66_E02.f

Conread position: 107-396
Cow position: chrX:26766650-26766363 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 126

Conread position: 111-396
Cow position: chrX:1942374-1942092 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 114, 14

Conread position: 111-403
Cow position: chrX:1391505-1391794 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 152, 7

Conread position: 114-345
Cow position: chrX:23132542-23132771 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 114-400
Cow position: chrX:8480216-8480500 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 111, 102

Conread position: 118-381
Cow position: chrX:16699879-16700134 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 118-390
Cow position: chrX:20720564-20720837 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 11

Conread position: 118-398
Cow position: chrX:971349-971630 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 239, 11

Conread position: 118-398
Cow position: chrX:28627063-28626780 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 23

Conread position: 118-398
Cow position: chrX:30231522-30231249 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 119-354
Cow position: chrX:12479280-12479512 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 95, 20

Conread position: 119-405
Cow position: chrX:2562283-2562003 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 106, 10

Conread position: 119-405
Cow position: chrX:5283202-5282912 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 106, 10

Conread position: 119-405
Cow position: chrX:5335911-5335629 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 278, 10

Conread position: 119-405
Cow position: chrX:29910850-29910569 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 106, 10

Conread position: 119-405
Cow position: chrX:31493993-31494277 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 106, 10

Conread position: 119-405
Cow position: chrX:35530437-35530721 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 106, 10

Conread position: 120-301
Cow position: chrX:30183344-30183166 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 152, 19

Conread position: 120-310
Cow position: chrX:31199024-31199213 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 21

Conread position: 120-346
Cow position: chrX:30712164-30712386 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 120-381
Cow position: chrX:23019903-23020161 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 120-390
Cow position: chrX:9093132-9093399 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chrX:321042-321313 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 120-398
Cow position: chrX:2482056-2481783 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chrX:15126662-15126382 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 149, 19

Conread position: 120-398
Cow position: chrX:21580042-21580313 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chrX:21830105-21830377 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chrX:26528552-26528823 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-398
Cow position: chrX:27315849-27316123 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 21

Conread position: 120-398
Cow position: chrX:38148167-38148443 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 263, 19

Conread position: 120-399
Cow position: chrX:13412558-13412284 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chrX:23040548-23040275 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chrX:23389943-23389668 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-399
Cow position: chrX:29852991-29852715 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-400
Cow position: chrX:12461394-12461666 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 268, 21

Conread position: 120-402
Cow position: chrX:22488719-22488996 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chrX:1547553-1547833 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 263, 19

Conread position: 120-403
Cow position: chrX:18953107-18952827 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 120-403
Cow position: chrX:23455443-23455162 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 19

Conread position: 120-403
Cow position: chrX:26758037-26757760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 277, 19

Conread position: 120-405
Cow position: chrX:15599539-15599820 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 121-368
Cow position: chrX:22611517-22611762 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 18

Conread position: 121-374
Cow position: chrX:28757920-28757672 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-381
Cow position: chrX:20315487-20315230 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 104, 18

Conread position: 121-383
Cow position: chrX:17051781-17052040 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-395
Cow position: chrX:22525029-22524758 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 121-398
Cow position: chrX:29096780-29097043 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 121-399
Cow position: chrX:2576996-2577274 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:3084551-3084277 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:5323148-5322877 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:7031035-7031311 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:12703129-12702855 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:26399606-26399331 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 104, 97

Conread position: 121-399
Cow position: chrX:31186649-31186374 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 18

Conread position: 121-399
Cow position: chrX:39563362-39563085 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 67, 18

Conread position: 121-400
Cow position: chrX:18553005-18553279 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 121-403
Cow position: chrX:29173188-29172908 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:979170-979452 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:983237-983519 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:2102760-2103041 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 121-405
Cow position: chrX:5394435-5394149 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:5863969-5864250 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:7482207-7482490 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:7752481-7752757 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:8963001-8962717 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:9125935-9126217 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:11148761-11148479 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 89, 18

Conread position: 121-405
Cow position: chrX:11422446-11422727 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:11464427-11464136 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:12353815-12354092 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:13076123-13075840 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:13096697-13096415 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:15178850-15178568 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 91, 18

Conread position: 121-405
Cow position: chrX:15980382-15980102 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:16276224-16276503 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:16362549-16362266 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:16811868-16811586 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:17477850-17477568 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:24325006-24324717 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:27425745-27425469 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 276, 18

Conread position: 121-405
Cow position: chrX:28561314-28561032 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 18

Conread position: 121-405
Cow position: chrX:28585554-28585836 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:29935170-29935453 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 18

Conread position: 121-405
Cow position: chrX:32066590-32066308 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 18

Conread position: 122-398
Cow position: chrX:5296974-5296696 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 79

Conread position: 123-318
Cow position: chrX:27961133-27961329 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 28

Conread position: 123-332
Cow position: chrX:19874969-19875175 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 6

Conread position: 123-381
Cow position: chrX:22816426-22816681 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 123-396
Cow position: chrX:30366198-30365940 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 123-398
Cow position: chrX:27987249-27986977 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 18

Conread position: 123-398
Cow position: chrX:28650968-28650705 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 6, 0

Conread position: 123-405
Cow position: chrX:12287824-12287547 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 256, 6

Conread position: 127-378
Cow position: chrX:16015857-16015610 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 12

Conread position: 129-378
Cow position: chrX:5304736-5304984 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 129-381
Cow position: chrX:29950021-29949773 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 144, 51

Conread position: 129-392
Cow position: chrX:4753037-4752777 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 10

Conread position: 129-396
Cow position: chrX:18610817-18610557 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 129-396
Cow position: chrX:21589551-21589815 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 12

Conread position: 129-398
Cow position: chrX:12315172-12314907 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 129-398
Cow position: chrX:21059365-21059631 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 144, 10

Conread position: 129-400
Cow position: chrX:24134674-24134404 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 112, 10

Conread position: 129-404
Cow position: chrX:4796901-4797180 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 10

Conread position: 129-405
Cow position: chrX:12183499-12183775 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 10

Conread position: 129-405
Cow position: chrX:12653943-12653667 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 96, 10

Conread position: 129-405
Cow position: chrX:29286013-29286290 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 10

Conread position: 132-390
Cow position: chrX:41850616-41850358 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 111

Conread position: 132-396
Cow position: chrX:6282175-6281912 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 199

Conread position: 134-362
Cow position: chrX:30140106-30139879 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 199, 186

Conread position: 134-398
Cow position: chrX:23277613-23277874 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 134-399
Cow position: chrX:23213754-23213499 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 134-403
Cow position: chrX:30070327-30070591 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 134-405
Cow position: chrX:12669162-12668894 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 134-405
Cow position: chrX:14460110-14460380 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 91, 82

Conread position: 139-398
Cow position: chrX:13053598-13053856 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 107

Conread position: 139-399
Cow position: chrX:2604639-2604901 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 79

Conread position: 139-399
Cow position: chrX:6872481-6872222 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 79

Conread position: 139-399
Cow position: chrX:8588756-8589011 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 86, 77

Conread position: 139-399
Cow position: chrX:12343534-12343784 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 86, 47

Conread position: 139-402
Cow position: chrX:44388362-44388616 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 60

Conread position: 139-404
Cow position: chrX:1834410-1834673 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 77

Conread position: 139-405
Cow position: chrX:9008927-9009197 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 244, 159

Conread position: 139-405
Cow position: chrX:18659196-18658934 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 79

Conread position: 139-405
Cow position: chrX:28554202-28554466 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 191

Conread position: 139-405
Cow position: chrX:37812754-37813022 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 86, 79

Conread position: 139-405
Cow position: chrX:37849591-37849859 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 79

Conread position: 140-398
Cow position: chrX:21269470-21269208 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 155

Conread position: 140-403
Cow position: chrX:30171240-30170978 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 157, 191

Conread position: 140-405
Cow position: chrX:3420614-3420343 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 76

Conread position: 141-399
Cow position: chrX:22618705-22618449 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 164, 190

Conread position: 142-400
Cow position: chrX:18767768-18768022 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 188, 0

Conread position: 142-405
Cow position: chrX:3375311-3375050 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 83, 76

Conread position: 151-399
Cow position: chrX:26999196-26999434 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 23

Conread position: 153-405
Cow position: chrX:30011604-30011855 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 72, 65

Conread position: 167-405
Cow position: chrX:14595465-14595706 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 49

Conread position: 168-400
Cow position: chrX:41102845-41102616 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 182-405
Cow position: chrX:16779942-16780163 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 93

Conread position: 197-405
Cow position: chrX:29793384-29793175 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 189, 133

Conread position: 199-398
Cow position: chrX:27593338-27593140 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 131

Conread position: 217-400
Cow position: chrX:24377662-24377847 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 111

Conread position: 230-405
Cow position: chrX:674523-674345 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 101

Conread position: 230-405
Cow position: chrX:10745468-10745295 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 169, 68

Conread position: 234-392
Cow position: chrX:15487063-15486908 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 245-399
Cow position: chrX:34219008-34219159 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 77

Conread position: 248-404
Cow position: chrX:13397518-13397363 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 149, 82

Conread position: 249-404
Cow position: chrX:29885688-29885844 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 123, 81

Conread position: 251-405
Cow position: chrX:30202028-30201875 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 146, 79

Show alignments to all cow chromosomes.