Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 216-615 |
| Cow position: | chr1:30520031-30519598 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 216-615 |
| Cow position: | chr1:102433630-102434040 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 76 |
| Conread position: | 217-391 |
| Cow position: | chr1:76620041-76620222 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 217-421 |
| Cow position: | chr1:89733073-89733281 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 80 |
| Conread position: | 217-463 |
| Cow position: | chr1:38417568-38417308 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 254 |
| Conread position: | 217-488 |
| Cow position: | chr1:82922720-82923019 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-514 |
| Cow position: | chr1:4209642-4209315 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-520 |
| Cow position: | chr1:24442927-24443256 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 238 |
| Conread position: | 217-521 |
| Cow position: | chr1:81288569-81288255 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 203 |
| Conread position: | 217-530 |
| Cow position: | chr1:58338371-58338053 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 217-536 |
| Cow position: | chr1:33897694-33897346 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 217-553 |
| Cow position: | chr1:21355021-21355377 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 187 |
| Conread position: | 217-555 |
| Cow position: | chr1:57663433-57663090 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 108, 49 |
| Conread position: | 217-556 |
| Cow position: | chr1:47162209-47162561 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 217-556 |
| Cow position: | chr1:57569402-57569032 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-556 |
| Cow position: | chr1:89482258-89481917 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 217-557 |
| Cow position: | chr1:29039473-29039106 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 217-557 |
| Cow position: | chr1:81777861-81777500 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 233 |
| Conread position: | 217-560 |
| Cow position: | chr1:29363729-29363364 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-560 |
| Cow position: | chr1:31812473-31812112 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 217-560 |
| Cow position: | chr1:88132210-88131849 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 236 |
| Conread position: | 217-562 |
| Cow position: | chr1:17940336-17940713 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 24, 240 |
| Conread position: | 217-565 |
| Cow position: | chr1:57423398-57423775 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 217-565 |
| Cow position: | chr1:80357740-80358112 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 202 |
| Conread position: | 217-565 |
| Cow position: | chr1:89430308-89429931 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 285 |
| Conread position: | 217-565 |
| Cow position: | chr1:91900460-91900085 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 27, 355 |
| Conread position: | 217-579 |
| Cow position: | chr1:58177693-58178066 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 217-612 |
| Cow position: | chr1:27178061-27178462 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 217-612 |
| Cow position: | chr1:40575634-40575217 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 190 |
| Conread position: | 217-615 |
| Cow position: | chr1:3933823-3934260 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 217-615 |
| Cow position: | chr1:5356562-5356127 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:5503402-5502967 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:8826459-8826048 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 217-615 |
| Cow position: | chr1:9259919-9259479 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 356 |
| Conread position: | 217-615 |
| Cow position: | chr1:11859816-11860215 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 217-615 |
| Cow position: | chr1:17011301-17011733 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 27, 408 |
| Conread position: | 217-615 |
| Cow position: | chr1:23053179-23052763 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 217-615 |
| Cow position: | chr1:24652700-24652276 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 217-615 |
| Cow position: | chr1:25551399-25550962 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:28874501-28874081 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 217-615 |
| Cow position: | chr1:30063790-30063374 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 217-615 |
| Cow position: | chr1:30533586-30534020 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:31364664-31365097 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 217-615 |
| Cow position: | chr1:32566490-32566921 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:33552363-33551927 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:33713505-33713072 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:33852703-33852288 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 217-615 |
| Cow position: | chr1:34694117-34693690 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 160 |
| Conread position: | 217-615 |
| Cow position: | chr1:39545221-39544792 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 217-615 |
| Cow position: | chr1:40683307-40683739 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 27, 348 |
| Conread position: | 217-615 |
| Cow position: | chr1:42737867-42737458 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 217-615 |
| Cow position: | chr1:53199979-53199539 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 203 |
| Conread position: | 217-615 |
| Cow position: | chr1:56142910-56143336 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 217-615 |
| Cow position: | chr1:56192729-56193170 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:57696729-57697165 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:57972284-57972705 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 196 |
| Conread position: | 217-615 |
| Cow position: | chr1:62243219-62243643 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 217-615 |
| Cow position: | chr1:62804741-62805179 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:63604337-63604773 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:68606114-68606541 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 214 |
| Conread position: | 217-615 |
| Cow position: | chr1:69404438-69404006 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:72984908-72984503 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 217-615 |
| Cow position: | chr1:79455519-79455954 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:79635554-79635981 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 217-615 |
| Cow position: | chr1:85793115-85792679 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 217-615 |
| Cow position: | chr1:86595059-86595496 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr1:93855948-93855517 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 218-615 |
| Cow position: | chr1:98658488-98658907 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 220-540 |
| Cow position: | chr1:99315657-99315345 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 220-615 |
| Cow position: | chr1:73069652-73070058 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 173 |
| Conread position: | 220-615 |
| Cow position: | chr1:99914839-99914426 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 221-508 |
| Cow position: | chr1:78923657-78923343 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 221-528 |
| Cow position: | chr1:22906184-22905869 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 221-556 |
| Cow position: | chr1:76702871-76703204 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 221-565 |
| Cow position: | chr1:31417078-31417438 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 221-612 |
| Cow position: | chr1:29035697-29035279 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 221-613 |
| Cow position: | chr1:91891689-91892116 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 340 |
| Conread position: | 221-615 |
| Cow position: | chr1:22619228-22619638 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 221-615 |
| Cow position: | chr1:26517459-26517887 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 221-615 |
| Cow position: | chr1:44972739-44972319 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 221-615 |
| Cow position: | chr1:55320642-55321072 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 401 |
| Conread position: | 221-615 |
| Cow position: | chr1:72185450-72185881 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 222-613 |
| Cow position: | chr1:40511592-40512011 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 202 |
| Conread position: | 223-551 |
| Cow position: | chr1:29976151-29976477 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 223-555 |
| Cow position: | chr1:7408968-7409316 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 223-612 |
| Cow position: | chr1:86611559-86611145 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 225-560 |
| Cow position: | chr1:17035173-17035523 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 225-560 |
| Cow position: | chr1:72082202-72081839 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 226-565 |
| Cow position: | chr1:86546712-86547080 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 226-615 |
| Cow position: | chr1:61310646-61310221 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 227-453 |
| Cow position: | chr1:82477400-82477155 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 144 |
| Conread position: | 232-560 |
| Cow position: | chr1:72038153-72038500 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 232-615 |
| Cow position: | chr1:57658290-57657888 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 233-555 |
| Cow position: | chr1:15027757-15027425 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 235-615 |
| Cow position: | chr1:85779029-85779446 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 236-555 |
| Cow position: | chr1:51877615-51877938 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 239-555 |
| Cow position: | chr1:13581583-13581913 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 241-612 |
| Cow position: | chr1:85823568-85823208 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 242-490 |
| Cow position: | chr1:24206273-24206514 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 170, 29 |
| Conread position: | 242-555 |
| Cow position: | chr1:89494806-89495150 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 242-615 |
| Cow position: | chr1:20525884-20525477 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chr1:20830300-20829902 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 221 |
| Conread position: | 242-615 |
| Cow position: | chr1:55155602-55156001 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 242-615 |
| Cow position: | chr1:65387721-65387320 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 243-554 |
| Cow position: | chr1:69767984-69767647 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 243-560 |
| Cow position: | chr1:21088836-21088494 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 243-615 |
| Cow position: | chr1:56164940-56164557 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 247-534 |
| Cow position: | chr1:56724551-56724245 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 256-615 |
| Cow position: | chr1:38420062-38419672 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 66, 362 |
| Conread position: | 261-546 |
| Cow position: | chr1:89769326-89769636 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 276-615 |
| Cow position: | chr1:31398042-31397693 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 279-612 |
| Cow position: | chr1:63503175-63502829 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 304-615 |
| Cow position: | chr1:59208820-59209149 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 130, 21 |
| Conread position: | 306-615 |
| Cow position: | chr1:55275706-55276033 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 307-615 |
| Cow position: | chr1:27542042-27541744 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 307-615 |
| Cow position: | chr1:77115400-77115702 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 313-615 |
| Cow position: | chr1:12060895-12061213 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 315-605 |
| Cow position: | chr1:99018695-99018999 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 322-565 |
| Cow position: | chr1:67833821-67834069 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 322-611 |
| Cow position: | chr1:55777887-55777588 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 322-615 |
| Cow position: | chr1:52357949-52358258 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 180 |
| Conread position: | 322-615 |
| Cow position: | chr1:60340606-60340301 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 178 |
| Conread position: | 322-615 |
| Cow position: | chr1:74285477-74285789 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 322-615 |
| Cow position: | chr1:94660984-94660675 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 283 |
| Conread position: | 325-615 |
| Cow position: | chr1:69921127-69921434 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 331-615 |
| Cow position: | chr1:21998672-21998954 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 225, 95 |
| Conread position: | 336-615 |
| Cow position: | chr1:49972887-49973187 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 223 |
| Conread position: | 338-615 |
| Cow position: | chr1:6195536-6195235 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 342-560 |
| Cow position: | chr1:67002379-67002152 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 181 |
| Conread position: | 345-604 |
| Cow position: | chr1:44100116-44100386 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 357-554 |
| Cow position: | chr1:22843923-22843710 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 369-615 |
| Cow position: | chr1:32662972-32662727 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 373-555 |
| Cow position: | chr1:1459948-1460123 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 378-605 |
| Cow position: | chr1:58200256-58200499 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 398-612 |
| Cow position: | chr1:76620446-76620680 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 424-615 |
| Cow position: | chr1:43636874-43636678 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 437-615 |
| Cow position: | chr1:25178845-25179028 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 437-615 |
| Cow position: | chr1:48247024-48246837 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 131, 7 |
| Conread position: | 458-615 |
| Cow position: | chr1:3384858-3385024 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 459-615 |
| Cow position: | chr1:76544371-76544535 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.