Cow genome map
| Conread name: | Lym2-sn67_H09.f |
| Conread position: | 216-615 |
| Cow position: | chr10:1378953-1378530 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 182 |
| Conread position: | 217-386 |
| Cow position: | chr10:29109526-29109702 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 217-483 |
| Cow position: | chr10:51773758-51774045 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 217-489 |
| Cow position: | chr10:28946932-28946638 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 217-543 |
| Cow position: | chr10:21488414-21488066 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 217-543 |
| Cow position: | chr10:29631342-29631699 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-548 |
| Cow position: | chr10:126745-126383 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 201 |
| Conread position: | 217-551 |
| Cow position: | chr10:58812306-58812657 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 217-552 |
| Cow position: | chr10:48397644-48398004 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 51, 354 |
| Conread position: | 217-555 |
| Cow position: | chr10:32430171-32429819 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 217-556 |
| Cow position: | chr10:10583552-10583204 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 217-557 |
| Cow position: | chr10:39814942-39815311 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 27, 203 |
| Conread position: | 217-559 |
| Cow position: | chr10:42642026-42641682 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 217-560 |
| Cow position: | chr10:39039838-39040211 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 217-565 |
| Cow position: | chr10:16478210-16477854 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 217-571 |
| Cow position: | chr10:7897026-7897410 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-609 |
| Cow position: | chr10:36469007-36469419 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 217-612 |
| Cow position: | chr10:20375382-20375805 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 217-612 |
| Cow position: | chr10:41158882-41158474 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 217-612 |
| Cow position: | chr10:42111876-42111449 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 182 |
| Conread position: | 217-612 |
| Cow position: | chr10:57555879-57556313 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-614 |
| Cow position: | chr10:22102694-22102262 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 249 |
| Conread position: | 217-614 |
| Cow position: | chr10:22575691-22576101 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 217-614 |
| Cow position: | chr10:50136024-50135595 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 217-615 |
| Cow position: | chr10:1665075-1665511 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr10:7280649-7281067 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 300 |
| Conread position: | 217-615 |
| Cow position: | chr10:19513033-19512614 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 242 |
| Conread position: | 217-615 |
| Cow position: | chr10:19841135-19840704 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr10:21399227-21399648 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 217-615 |
| Cow position: | chr10:27663810-27664241 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 217-615 |
| Cow position: | chr10:29845196-29845624 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 215 |
| Conread position: | 217-615 |
| Cow position: | chr10:32702183-32701749 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 419 |
| Conread position: | 217-615 |
| Cow position: | chr10:39778665-39779097 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 217-615 |
| Cow position: | chr10:40150807-40151222 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 217-615 |
| Cow position: | chr10:40398448-40398038 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 239 |
| Conread position: | 217-615 |
| Cow position: | chr10:41568557-41568123 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 320 |
| Conread position: | 217-615 |
| Cow position: | chr10:44708155-44708592 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 301 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 217-615 |
| Cow position: | chr10:47908390-47907954 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 284 |
| Conread position: | 217-615 |
| Cow position: | chr10:53320937-53321368 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 396 |
| Conread position: | 217-615 |
| Cow position: | chr10:57502263-57501843 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 243 |
| Conread position: | 217-615 |
| Cow position: | chr10:57988538-57988973 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 218-615 |
| Cow position: | chr10:32558791-32558374 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 220-535 |
| Cow position: | chr10:27268833-27269163 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 220-615 |
| Cow position: | chr10:16926967-16926552 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 220-615 |
| Cow position: | chr10:38343925-38344336 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 220-615 |
| Cow position: | chr10:60361349-60360915 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 221-523 |
| Cow position: | chr10:20382573-20382888 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 31, 194 |
| Conread position: | 221-565 |
| Cow position: | chr10:55285411-55285030 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 221-607 |
| Cow position: | chr10:17433799-17433383 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 221-615 |
| Cow position: | chr10:14843212-14842805 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 221-615 |
| Cow position: | chr10:14853312-14852892 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 221-615 |
| Cow position: | chr10:28642991-28642557 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 222-431 |
| Cow position: | chr10:37771315-37771107 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 224-554 |
| Cow position: | chr10:29722600-29722961 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 224-615 |
| Cow position: | chr10:21739303-21739726 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 225-615 |
| Cow position: | chr10:20369647-20370053 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 233-613 |
| Cow position: | chr10:58928650-58928267 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 234-615 |
| Cow position: | chr10:51781981-51782388 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 174 |
| Conread position: | 242-572 |
| Cow position: | chr10:30684065-30684421 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 275 |
| Conread position: | 242-612 |
| Cow position: | chr10:39181223-39180815 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 252 |
| Conread position: | 242-615 |
| Cow position: | chr10:8325925-8326296 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 242-615 |
| Cow position: | chr10:28255989-28256393 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-615 |
| Cow position: | chr10:38849708-38849325 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 322 |
| Conread position: | 243-615 |
| Cow position: | chr10:14805272-14804867 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 254 |
| Conread position: | 243-615 |
| Cow position: | chr10:19494863-19495257 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 243-615 |
| Cow position: | chr10:55094693-55094290 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 32, 168 |
| Conread position: | 250-615 |
| Cow position: | chr10:38544512-38544895 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 203 |
| Conread position: | 251-612 |
| Cow position: | chr10:9944878-9945253 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 277-554 |
| Cow position: | chr10:29109761-29110041 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 284-615 |
| Cow position: | chr10:6598-6270 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 300-554 |
| Cow position: | chr10:46192417-46192158 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 307-615 |
| Cow position: | chr10:279262-279584 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 308-557 |
| Cow position: | chr10:62407433-62407692 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 313-615 |
| Cow position: | chr10:66899040-66899345 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 322-465 |
| Cow position: | chr10:8291267-8291126 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 322-565 |
| Cow position: | chr10:33870415-33870164 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 112, 249 |
| Conread position: | 322-615 |
| Cow position: | chr10:2119683-2119989 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 322-615 |
| Cow position: | chr10:14334515-14334825 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 322-615 |
| Cow position: | chr10:38537166-38537477 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 322-615 |
| Cow position: | chr10:58096698-58096993 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 234, 38 |
| Conread position: | 326-519 |
| Cow position: | chr10:39878104-39878304 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 331-615 |
| Cow position: | chr10:42752461-42752154 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 14, 271 |
| Conread position: | 346-615 |
| Cow position: | chr10:21481240-21480957 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 351-561 |
| Cow position: | chr10:51843892-51844107 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 170 |
| Conread position: | 351-561 |
| Cow position: | chr10:57406606-57406827 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.